Gene Expression Omnibus (GEO) Overview Version：2013-06-15Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data Unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(7,275)		   Primates
(172)		   Rodents
(1,994)		   Mammals
(913)		   Vertebrates
(290)		   Invertebrates
(664)		   Plants
(3,210)		   Bacteria
(998)		   Viruses
(19)		   Phages
(0)		   Unclassified
(102)		   All
(15,646)		  
  SAGE NlaIII
(5)		   SAGE RsaI
(0)		   SAGE Sau3A
(0)		   MPSS
(0)		   GeneChip
(92)		   Tiling Array
(0)		   cDNA Array
(0)		   Oligo Array
(8)		   Bead Array
(0)		   Protein Array
(0)		   Antibody
(0)		   RT-PCR
(0)		   HT-Seq
(67)		   Other
(0)		   All
(172)		  
  brain
(88)		   blood
(0)		   connective
(8)		   reproductive
(24)		   muscular
(7)		   digestive
(1)		   liver
(13)		   lung
(0)		   urinary
(2)		   endo/exo-crine
(0)		   embryo
(11)		   adult aerial structure
(0)		   young aerial structure
(0)		   root
(0)		   meristem/growing tissue
(0)		   flower/sexual organ
(0)		   seed/fruit/grain
(0)		   pooled
(6)		   unclassified
(12)		   all
(172)		  
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Sample ID Title Number of Data Institute Submission date Platform Sample type Species Organ class Reasoning of the classification
Keywords used for the classification are shown with bold font.
1 GSM143121 Vero cell line transformed by A fragment of genome of infectious bursal disease virus 10,160 Zhejiang University 2006-10-30 [SAGE NlaIII] SAGE:17:NlaIII:Chlorocebus aethiops (GPL4510) SAGE Chlorocebus aethiops
Chlorocebus aethiops		 unclassified source_name:vero cell,A fragment of genome of infectious bursal disease virus title:Vero cell line transformed by A fragment of genome of infectious bursal disease virus description:as the commercial kit producted by invitrogen company,I-SAGEâ„¢ Long Kit,Catalog no. T5000-03
2 GSM143058 Vero cell infected by infectious bursal disease virus 9,186 Zhejiang University 2006-10-30 [SAGE NlaIII] SAGE:17:NlaIII:Chlorocebus aethiops (GPL4510) SAGE Chlorocebus aethiops
Chlorocebus aethiops		 unclassified source_name:vero cell,infectious bursal disease virus title:Vero cell infected by infectious bursal disease virus description:as the commercial kit producted by invitrogen company,I-SAGEâ„¢ Long Kit,Catalog no. T5000-03
3 GSM143123 Vero cell line transformed by the 243 fragment of genome of infectious bursal disease virus 8,840 Zhejiang University 2006-10-30 [SAGE NlaIII] SAGE:17:NlaIII:Chlorocebus aethiops (GPL4510) SAGE Chlorocebus aethiops
Chlorocebus aethiops		 unclassified source_name:vero cell,the 243 fragment of genome of infectious bursal disease virus title:Vero cell line transformed by the 243 fragment of genome of infectious bursal disease virus description:as the commercial kit producted by invitrogen company,I-SAGEâ„¢ Long Kit,Catalog no. T5000-03
4 GSM143101 Vero cell 8,369 Zhejiang University 2006-10-30 [SAGE NlaIII] SAGE:17:NlaIII:Chlorocebus aethiops (GPL4510) SAGE Chlorocebus aethiops
Chlorocebus aethiops		 unclassified source_name:vero cell title:Vero cell description:as the commercial kit producted by invitrogen company,I-SAGEâ„¢ Long Kit,Catalog no. T5000-03
5 GSM143110 Vero cell line transformed by vp5 gene of infectious bursal disease virus 7,130 Zhejiang University 2006-10-30 [SAGE NlaIII] SAGE:17:NlaIII:Chlorocebus aethiops (GPL4510) SAGE Chlorocebus aethiops
Chlorocebus aethiops		 unclassified source_name:vero cell,vp5 gene of infectious bursal disease virus title:Vero cell line transformed by vp5 gene of infectious bursal disease virus description:as the commercial kit producted by invitrogen company,I-SAGEâ„¢ Long Kit,Catalog no. T5000-03
6 GSM740338 Retina-control-rep1 52,024 West China Hospital, Sichuan University 2011-06-10 [GeneChip] [Rhesus] Affymetrix Rhesus Macaque Genome Array (GPL3535) RNA Macaca mulatta
Macaca mulatta		 pooled Retina contralateral optic nerve injury
7 GSM740339 Retina-radiation-rep1 52,024 West China Hospital, Sichuan University 2011-06-10 [GeneChip] [Rhesus] Affymetrix Rhesus Macaque Genome Array (GPL3535) RNA Macaca mulatta
Macaca mulatta		 pooled Retina ipsilateral optic nerve injury
8 GSM740340 Retina-control-rep2 52,024 West China Hospital, Sichuan University 2011-06-10 [GeneChip] [Rhesus] Affymetrix Rhesus Macaque Genome Array (GPL3535) RNA Macaca mulatta
Macaca mulatta		 pooled Retina contralateral optic nerve injury
9 GSM740341 Retina-radiation-rep2 52,024 West China Hospital, Sichuan University 2011-06-10 [GeneChip] [Rhesus] Affymetrix Rhesus Macaque Genome Array (GPL3535) RNA Macaca mulatta
Macaca mulatta		 pooled Retina ipsilateral optic nerve injury
10 GSM740342 Retina-radiation-rep3 52,024 West China Hospital, Sichuan University 2011-06-10 [GeneChip] [Rhesus] Affymetrix Rhesus Macaque Genome Array (GPL3535) RNA Macaca mulatta
Macaca mulatta		 pooled Retina ipsilateral optic nerve injury
11 GSM740343 Retina-control-rep3 52,024 West China Hospital, Sichuan University 2011-06-10 [GeneChip] [Rhesus] Affymetrix Rhesus Macaque Genome Array (GPL3535) RNA Macaca mulatta
Macaca mulatta		 pooled Retina contralateral optic nerve injury
12 GSM769050 sRNA_D15 446,732 Shantou University 2011-07-29 [HT Sequencing] Illumina Genome Analyzer IIx (Macaca mulatta) (GPL13766) SRA Macaca mulatta
Macaca mulatta		 uterus small RNA deep sequencing of the endometrium on day 21 of menstral cycle
13 GSM769052 mRNA_D15 401,702 Shantou University 2011-07-29 [HT Sequencing] Illumina Genome Analyzer IIx (Macaca mulatta) (GPL13766) SRA Macaca mulatta
Macaca mulatta		 uterus mRNA tag sequencing of the endometrium on day 15 of menstral cycle
14 GSM769053 mRNA_D21 393,481 Shantou University 2011-07-29 [HT Sequencing] Illumina Genome Analyzer IIx (Macaca mulatta) (GPL13766) SRA Macaca mulatta
Macaca mulatta		 uterus mRNA tag sequencing of the endometrium on day 21 of menstral cycle
15 GSM769051 sRNA_D21 386,913 Shantou University 2011-07-29 [HT Sequencing] Illumina Genome Analyzer IIx (Macaca mulatta) (GPL13766) SRA Macaca mulatta
Macaca mulatta		 uterus small RNA deep sequencing of endometrium on day 21 of menstral cycle
16 GSM678420 Small RNA from 4 pooled macaque principal and basal cells 9,265,352 PICB 2011-02-22 [HT Sequencing] Illumina Genome Analyzer II (Macaca mulatta) (GPL9160) SRA Macaca mulatta
Macaca mulatta		 skin macaque principal and basal cells of epididymis
17 GSM678421 Small RNA from 4 pooled macaque peritubular tissues 6,634,347 PICB 2011-02-22 [HT Sequencing] Illumina Genome Analyzer II (Macaca mulatta) (GPL9160) SRA Macaca mulatta
Macaca mulatta		 skin macaque peritubular tissues of epididymis
18 GSM678415 Small RNA from macaque testis 5,567,852 PICB 2011-02-22 [HT Sequencing] Illumina Genome Analyzer II (Macaca mulatta) (GPL9160) SRA Macaca mulatta
Macaca mulatta		 testis macaque testis
19 GSM678416 Small RNA from macaque epididymis 2,378,738 PICB 2011-02-22 [HT Sequencing] Illumina Genome Analyzer II (Macaca mulatta) (GPL9160) SRA Macaca mulatta
Macaca mulatta		 skin macaque epididymis
20 GSM678417 Small RNA from macaque prostate 1,734,895 PICB 2011-02-22 [HT Sequencing] Illumina Genome Analyzer II (Macaca mulatta) (GPL9160) SRA Macaca mulatta
Macaca mulatta		 prostate macaque prostate
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