Gene Expression Omnibus (GEO) Overview Version´╝Ü2014-04-12Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data Unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(615,734)
  Primates
(5,814)
  Rodents
(225,055)
  Mammals
(20,968)
  Vertebrates
(22,581)
  Invertebrates
(46,584)
  Plants
(107,706)
  Bacteria
(45,091)
  Viruses
(1,432)
  Phages
(112)
  Unclassified
(6,986)
  All
(1,101,311)
 
  SAGE NlaIII
(5)
  SAGE RsaI
(0)
  SAGE Sau3A
(0)
  MPSS
(0)
  GeneChip
(2,966)
  Tiling Array
(5)
  cDNA Array
(154)
  Oligo Array
(988)
  Bead Array
(1,005)
  Protein Array
(0)
  Antibody
(0)
  RT-PCR
(12)
  HT-Seq
(511)
  Other
(168)
  All
(5,814)
 
  brain
(1,067)
  blood
(1,516)
  connective
(187)
  reproductive
(122)
  muscular
(99)
  digestive
(191)
  liver
(262)
  lung
(181)
  urinary
(76)
  endo/exo-crine
(134)
  embryo
(123)
  adult aerial structure
(0)
  young aerial structure
(0)
  root
(0)
  meristem/growing tissue
(0)
  flower/sexual organ
(0)
  seed/fruit/grain
(0)
  pooled
(280)
  unclassified
(1,576)
  all
(5,814)
 
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Sample ID Title Number of Data Institute Submission date Platform Sample type Species Organ class Reasoning of the classification
Keywords used for the classification are shown with bold font.
1 GSM734342 cyno_kidney 0 BGI-Shenzhen, Shenzhen 518083, China 2011-05-31 [HT Sequencing] Illumina Genome Analyzer (Macaca fascicularis) (GPL13663) SRA Macaca fascicularis
Macaca fascicularis
kidney kidney
2 GSM734348 rhesus_kidney 0 BGI-Shenzhen, Shenzhen 518083, China 2011-05-31 [HT Sequencing] Illumina Genome Analyzer (Macaca mulatta) (GPL13267) SRA Macaca mulatta
Macaca mulatta
kidney kidney
3 GSM1229149 rT4 0 University of Washington 2013-09-11 [HT Sequencing] Illumina Genome Analyzer II (Macaca mulatta) (GPL9160) SRA Macaca mulatta
Macaca mulatta
bladder rT4
4 GSM752659 ggo kd F 1 0 University of Lausanne 2011-07-01 [HT Sequencing] Illumina Genome Analyzer IIx (Gorilla gorilla) (GPL13801) SRA Gorilla gorilla
Gorilla gorilla
kidney Kidney
5 GSM752660 ggo kd M 1 0 University of Lausanne 2011-07-01 [HT Sequencing] Illumina Genome Analyzer IIx (Gorilla gorilla) (GPL13801) SRA Gorilla gorilla
Gorilla gorilla
kidney Kidney
6 GSM747490 rhesus_kidney 0 Merck Research Laboratories 2011-06-24 [HT Sequencing] Illumina Genome Analyzer IIx (Macaca mulatta) (GPL13766) SRA Macaca mulatta
Macaca mulatta
kidney kidney
7 GSM752638 mml kd F 1 0 University of Lausanne 2011-07-01 [HT Sequencing] Illumina Genome Analyzer IIx (Macaca mulatta) (GPL13766) SRA Macaca mulatta
Macaca mulatta
kidney Kidney
8 GSM752639 mml kd M 1 0 University of Lausanne 2011-07-01 [HT Sequencing] Illumina Genome Analyzer IIx (Macaca mulatta) (GPL13766) SRA Macaca mulatta
Macaca mulatta
kidney Kidney
9 GSM995308 main_mml_kid 0 UNIL 2012-08-30 [HT Sequencing] Illumina Genome Analyzer IIx (Macaca mulatta) (GPL13766) SRA Macaca mulatta
Macaca mulatta
kidney Kidney
10 GSM995334 br_mml_kid 0 UNIL 2012-08-30 [HT Sequencing] Illumina Genome Analyzer IIx (Macaca mulatta) (GPL13766) SRA Macaca mulatta
Macaca mulatta
kidney Kidney
11 GSM752686 ppa kd F 1 0 University of Lausanne 2011-07-01 [HT Sequencing] Illumina Genome Analyzer IIx (Pan paniscus) (GPL13803) SRA Pan paniscus
Pan paniscus
kidney Kidney
12 GSM752687 ppa kd M 1 0 University of Lausanne 2011-07-01 [HT Sequencing] Illumina Genome Analyzer IIx (Pan paniscus) (GPL13803) SRA Pan paniscus
Pan paniscus
kidney Kidney
13 GSM752674 ptr kd F 1 0 University of Lausanne 2011-07-01 [HT Sequencing] Illumina Genome Analyzer IIx (Pan troglodytes) (GPL13802) SRA Pan troglodytes
Pan troglodytes
kidney Kidney
14 GSM752675 ptr kd M 1 0 University of Lausanne 2011-07-01 [HT Sequencing] Illumina Genome Analyzer IIx (Pan troglodytes) (GPL13802) SRA Pan troglodytes
Pan troglodytes
kidney Kidney
15 GSM752649 ppy kd F 1 0 University of Lausanne 2011-07-01 [HT Sequencing] Illumina Genome Analyzer IIx (Pongo pygmaeus) (GPL13800) SRA Pongo pygmaeus
Pongo pygmaeus
kidney Kidney
16 GSM752650 ppy kd M 1 0 University of Lausanne 2011-07-01 [HT Sequencing] Illumina Genome Analyzer IIx (Pongo pygmaeus) (GPL13800) SRA Pongo pygmaeus
Pongo pygmaeus
kidney Kidney
17 GSM1020696 rhesus_a_kidney 0 MIT 2012-10-17 [HT Sequencing] Illumina HiSeq 2000 (Macaca mulatta) (GPL14954) SRA Macaca mulatta
Macaca mulatta
kidney rhesus_kidney
18 GSM1020705 rhesus_b_kidney 0 MIT 2012-10-17 [HT Sequencing] Illumina HiSeq 2000 (Macaca mulatta) (GPL14954) SRA Macaca mulatta
Macaca mulatta
kidney rhesus_kidney
19 GSM1020714 rhesus_c_kidney 0 MIT 2012-10-17 [HT Sequencing] Illumina HiSeq 2000 (Macaca mulatta) (GPL14954) SRA Macaca mulatta
Macaca mulatta
kidney rhesus_kidney
20 GSM639344 genomic DNA from chimpanzee kidney 1 (replicate A) 27,578 University of Chicago 2010-12-13 [Bead Array] Illumina HumanMethylation27 BeadChip (HumanMethylation27_270596_v.1.2) (GPL8490) genomic Pan troglodytes
Pan troglodytes
kidney kidney
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