Gene Expression Omnibus (GEO) Overview Version:2014-04-12Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(249)
  Primates
(8)
  Rodents
(345)
  Mammals
(28)
  Vertebrates
(10)
  Invertebrates
(65)
  Plants
(116)
  Bacteria
(60)
  Viruses
(0)
  Phages
(0)
  Unclassified
(7)
  All
(889)
 
  SAGE NlaIII
(0)
  SAGE RsaI
(0)
  SAGE Sau3A
(0)
  MPSS
(0)
  GeneChip
(174)
  Tiling Array
(35)
  cDNA Array
(28)
  Oligo Array
(26)
  Bead Array
(11)
  Protein Array
(0)
  Antibody
(0)
  RT-PCR
(0)
  HT-Seq
(71)
  Other
(0)
  All
(345)
 
Title Platform Institute Submission date Species Data size
(probes x samples)
Sample NCBI
FTP
site
Animal Plant  
brain blood connective reproductive muscular digestive liver lung urinary endo/exo-crine embryo adult aerial structure young aerial structure root meristem/growing tissue flower/sexual organ seed/fruit/grain pooled unclassified
1 Genome-wide analysis of gene expression in colon and brain during the suckling period. (GSE18133) [Bead Array] Illumina ratRef-12 v1.0 expression beadchip (GPL6101) Nestlé Research Center 2009-09-16 Rattus norvegicus
Rattus norvegicus
2,409,961
(22,523 x 107)
54 53 by_platform
by_series
2 Benefits of a 6 week supplementation of sebacic acid on a mouse model of type 2 diabetes (db/db mice) (GSE21083) [Bead Array] Illumina MouseRef-8 v2.0 expression beadchip (GPL6885) Nestle Institute of Health Sciences 2010-03-26 Mus musculus
Mus musculus
770,910
(25,697 x 30)
30 by_platform
by_series
3 Germfree C57BL/6J mice are resistant to high fat diet-induced insulin resistance and have altered cholesterol metabolism (GSE19038) [Bead Array] Illumina mouseRef-8 v1.1 expression beadchip (GPL6103) Nestle Institute of Health Sciences 2009-11-16 Mus musculus
Mus musculus
738,390
(24,613 x 30)
16 14 by_platform
by_series
4 Effects of Tdg deficiency on overall transcription in mouse embryonic fibroblasts and during cell differentiation (GSE20693) [Bead Array] Illumina MouseWG-6 v2.0 expression beadchip (GPL6887) University Hospital Bern 2010-03-09 Mus musculus
Mus musculus
543,372
(45,281 x 12)
6 6 by_platform
by_series
5 Gene expression analysis of wild type and KAP1 KO splenic B cells (GSE34446) [Bead Array] Illumina MouseWG-6 v2.0 expression beadchip (GPL6887) EPFL SV-GHI 2011-12-14 Mus musculus
Mus musculus
543,372
(45,281 x 12)
12 by_platform
by_series
6 KAP1 regulates gene networks controlling B lymphoid cell differentiation and function (GSE36880) [Bead Array] Illumina MouseWG-6 v2.0 expression beadchip (GPL6887) EPFL SV-GHI 2012-03-28 Mus musculus
Mus musculus
543,372
(45,281 x 12)
12 by_platform
by_series
7 Gene expression in Kras-driven lung tumors in mice fed with standard or high calorie diet (GSE56260) [Bead Array] Illumina MouseWG-6 v2.0 expression beadchip (GPL6887) University of Geneva 2014-03-26 Mus musculus
Mus musculus
498,091
(45,281 x 11)
11 by_platform
by_series
8 KRAB/KAP1-microRNA cascade regulates erythropoiesis through the stage-specific control of mitophagy [array] (GSE44063) [Bead Array] Illumina MouseWG-6 v2.0 expression beadchip (GPL6887) EPFL 2013-02-05 Mus musculus
Mus musculus
362,248
(45,281 x 8)
8 by_platform
by_series
9 KRAB/KAP1-microRNA cascade regulates erythropoiesis through the stage-specific control of mitophagy (GSE44065) [Bead Array] Illumina MouseWG-6 v2.0 expression beadchip (GPL6887) EPFL 2013-02-05 Mus musculus
Mus musculus
362,248
(45,281 x 8)
8 by_platform
by_series
10 Gene expression analysis of wild type and KAP1 KO mouse T cell progenitors (GSE34447) [Bead Array] Illumina MouseWG-6 v2.0 expression beadchip (GPL6887) EPFL SV-GHI 2011-12-14 Mus musculus
Mus musculus
271,686
(45,281 x 6)
6 by_platform
by_series
11 KAP1 regulates gene networks controlling T cell development and activation (GSE38580) [Bead Array] Illumina MouseWG-6 v2.0 expression beadchip (GPL6887) EPFL SV-GHI 2012-06-07 Mus musculus
Mus musculus
271,686
(45,281 x 6)
6 by_platform
by_series