Gene Expression Omnibus (GEO) Overview Version：2013-05-25Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(568)		   Primates
(9)		   Rodents
(333)		   Mammals
(16)		   Vertebrates
(49)		   Invertebrates
(210)		   Plants
(212)		   Bacteria
(76)		   Viruses
(0)		   Phages
(0)		   Unclassified
(13)		   All
(1,489)		  
  SAGE NlaIII
(1)		   SAGE RsaI
(0)		   SAGE Sau3A
(0)		   MPSS
(0)		   GeneChip
(180)		   Tiling Array
(2)		   cDNA Array
(7)		   Oligo Array
(88)		   Bead Array
(28)		   Protein Array
(0)		   Antibody
(0)		   RT-PCR
(4)		   HT-Seq
(22)		   Other
(1)		   All
(333)		  
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Title Platform Institute Submission date Species Data size
(probes x samples)		 Sample NCBI
FTP
site
Animal Plant  
brain blood connective reproductive muscular digestive liver lung urinary endo/exo-crine embryo adult aerial structure young aerial structure root meristem/growing tissue flower/sexual organ seed/fruit/grain pooled unclassified
1 Transcriptional networks regulated by drugs of abuse in mouse striatum (GSE15774) [Bead Array] Illumina mouse-6 v1.1 expression beadchip (GPL6105) Institute of Pharmacology PAS 2009-04-22 Mus musculus
Mus musculus		 5,036,256
(46,632 x 108) 		108 by_platform
by_series
2 High-fat diet leads to tissue-specific changes reflecting risk factors for diseases in DBA/2J mice (GSE15822) [Bead Array] Illumina mouse-6 v1.1 expression beadchip (GPL6105) The Jackson Laboratory 2009-04-24 Mus musculus
Mus musculus		 4,476,672
(46,632 x 96) 		72 12 12 by_platform
by_series
3 Host lung gene expression patterns predict the etiology of infectious pneumonias (GSE15869) [Bead Array] Illumina mouse-6 v1.0 expression beadchip (GPL6099) University of Texas-M.D. Anderson Cancer Center 2009-04-28 Mus musculus
Mus musculus		 3,864,420
(46,005 x 84) 		84 by_platform
by_series
4 Gene expression profiling of a mouse model of dilated cardiomyopathy (GSE16909) [Bead Array] Illumina MouseWG-6 v2.0 expression beadchip (GPL6887) Henry Ford Hospital 2009-06-30 Mus musculus
Mus musculus		 1,086,744
(45,281 x 24) 		24 by_platform
by_series
5 Expression profiling of skeletal muscle following acute β2-adrenergic stimulation (GSE15793) [Bead Array] Illumina Mouse Ref-6 V1 (GPL6333) Institute for Molecular Bioscience 2009-04-23 Mus musculus
Mus musculus		 737,920
(46,120 x 16) 		16 by_platform
by_series
6 Reticulocyte 3 timepoints (GSE16174) [Bead Array] Illumina MouseRef-8 v2.0 expression beadchip (GPL6885) Children's Hospital Boston 2009-05-20 Mus musculus
Mus musculus		 616,728
(25,697 x 24) 		24 by_platform
by_series
7 Normal lung transcriptome distinguishes mouse lines with different susceptibility to inflammation and to tumorigenesis (GSE16510) [Bead Array] Illumina MouseRef-8 v2.0 expression beadchip (GPL6885) IRCSS Istituto Nazionale Tumori 2009-06-09 Mus musculus
Mus musculus		 616,728
(25,697 x 24) 		24 by_platform
by_series
8 Global gene profiling comparison between hydrogen sulfide- and N-methyl-D-aspartate-induced neuronal deaths (GSE16035) [Bead Array] Illumina MouseRef8 Ver1.1 (GPL8540) Menzies Research Institute 2009-05-08 Mus musculus
Mus musculus		 592,584
(24,691 x 24) 		24 by_platform
by_series
9 Prionic protein gene dosage is critical for maintenance of neuronal homeostasis of hippocampal circuits (GSE16223) [Bead Array] Illumina mouse-6 v1.1 expression beadchip (GPL6105) IMPPC 2009-05-26 Mus musculus
Mus musculus		 559,584
(46,632 x 12) 		12 by_platform
by_series
10 Transcription profile of K-ras activated murine menstruating uteri (GSE15518) [Bead Array] Illumina mouse-6 v1.1 expression beadchips (GPL6568) University of Cambridge 2009-04-02 Mus musculus
Mus musculus		 559,536
(46,628 x 12) 		12 by_platform
by_series
11 Functional genomic analysis of frataxin deficiency, Illumina data (GSE15848) [Bead Array] Illumina mouseRef-8 v1.0 expression beadchip (GPL6100) UCLA 2009-04-27 Mus musculus
Mus musculus		 527,626
(23,983 x 22) 		16 6 by_platform
by_series
12 Functional genomic analysis of frataxin deficiency (GSE15849) [Bead Array] Illumina mouseRef-8 v1.0 expression beadchip (GPL6100) UCLA 2009-04-27 Mus musculus
Mus musculus		 527,626
(23,983 x 22) 		16 6 by_platform
by_series
13 Sex-Dependent Programming of Glucose and Fatty Acid Metabolism in Mouse Offspring by Maternal Protein Restriction (GSE15940) [Bead Array] Illumina MouseRef-8 v2.0 expression beadchip (GPL6885) UMCG 2009-05-04 Mus musculus
Mus musculus		 411,152
(25,697 x 16) 		16 by_platform
by_series
14 Heparan Sulfation Dependent FGF Signalling Maintains ES Cells Primed for Differentiation in a Heterogeneous State (GSE15974) [Bead Array] Illumina MouseRef-8 v2.0 expression beadchip (GPL6885) National University of Singapore (NUS) 2009-05-06 Mus musculus
Mus musculus		 411,152
(25,697 x 16) 		8 8 by_platform
by_series
15 Sex-Dependent Programming of Glucose and Fatty Acid Metabolism in Mouse Offspring by Maternal Protein Restriction (GSE15940) [Bead Array] Illumina mouseRef-8 v1.1 expression beadchip (GPL6103) UMCG 2009-05-04 Mus musculus
Mus musculus		 393,808
(24,613 x 16) 		16 by_platform
by_series
16 Immunomodulatory function of bone marrow-derived mesenchymal stem cells in experimental autoimmune type 1 diabetes (GSE15516) [Bead Array] Illumina mouse-6 v1.1 expression beadchips (GPL6568) Children's Hospital Harvard Medical School 2009-04-02 Mus musculus
Mus musculus		 373,024
(46,628 x 8) 		8 by_platform
by_series
17 Elucidating Host-Pathogen Interaction in Acute Systemic Candidiasis in a Mouse Model Using Genomic Approach (GSE16339) [Bead Array] Illumina mouseRef-8 v1.1 expression beadchip (GPL6103) Universiti Putra Malaysia 2009-05-28 Mus musculus
Mus musculus		 344,582
(24,613 x 14) 		14 by_platform
by_series
18 GATA-2 controls megakaryocyte proliferation (GSE16521) [Bead Array] Illumina mouse-6 v1.1 expression beadchip [Array_Address_Id version] (GPL6481) Northwestern University 2009-06-09 Mus musculus
Mus musculus		 279,858
(46,643 x 6) 		6 by_platform
by_series
19 Microarray analysis of colonic mucosa gene expression in wild type and foxo4 knock out mice (GSE16033) [Bead Array] Illumina mouse-6 v1.1 expression beadchip (GPL6105) UT Southwestern Medical Center at Dallas 2009-05-08 Mus musculus
Mus musculus		 279,792
(46,632 x 6) 		6 by_platform
by_series
20 Whole genome transcription profile of antigen receptor activated B cells (GSE15606) [Bead Array] Illumina MouseWG-6 v2.0 expression beadchip (GPL6887) Umeå University 2009-04-08 Mus musculus
Mus musculus		 271,686
(45,281 x 6) 		6 by_platform
by_series
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