Gene Expression Omnibus (GEO) Overview Version：2013-06-15Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data Unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(17,824)		   Primates
(65)		   Rodents
(6,148)		   Mammals
(554)		   Vertebrates
(860)		   Invertebrates
(1,383)		   Plants
(3,183)		   Bacteria
(2,022)		   Viruses
(114)		   Phages
(0)		   Unclassified
(427)		   All
(32,603)		  
  SAGE NlaIII
(0)		   SAGE RsaI
(0)		   SAGE Sau3A
(0)		   MPSS
(0)		   GeneChip
(2,965)		   Tiling Array
(104)		   cDNA Array
(151)		   Oligo Array
(2,070)		   Bead Array
(724)		   Protein Array
(0)		   Antibody
(0)		   RT-PCR
(0)		   HT-Seq
(134)		   Other
(0)		   All
(6,148)		  
  brain
(100)		   blood
(58)		   connective
(24)		   reproductive
(38)		   muscular
(17)		   digestive
(0)		   liver
(58)		   lung
(36)		   urinary
(2)		   endo/exo-crine
(31)		   embryo
(73)		   adult aerial structure
(0)		   young aerial structure
(0)		   root
(0)		   meristem/growing tissue
(0)		   flower/sexual organ
(0)		   seed/fruit/grain
(0)		   pooled
(38)		   unclassified
(249)		   all
(724)		  
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Sample ID Title Number of Data Institute Submission date Platform Sample type Species Organ class Reasoning of the classification
Keywords used for the classification are shown with bold font.
1 GSM475455 Astrocytes-1 46,693 The University of Texas M.D. Anderson Cancer Center 2009-11-25 [Bead Array] Illumina human-6 v2.0 expression beadchip (GPL6102) RNA Mus musculus
Mus musculus		 corpus callosum/glia Mouse Astrocytes Cell
2 GSM486968 Spleen_uninfected_control_rep1 46,643 Queensland Institute of Medical Research 2009-12-17 [Bead Array] Illumina mouse-6 v1.1 expression beadchip [Array_Address_Id version] (GPL6481) RNA Mus musculus
Mus musculus		 spleen Spleen homogenate, uninfected
3 GSM486969 Spleen_uninfected_control_rep2 46,643 Queensland Institute of Medical Research 2009-12-17 [Bead Array] Illumina mouse-6 v1.1 expression beadchip [Array_Address_Id version] (GPL6481) RNA Mus musculus
Mus musculus		 spleen Spleen homogenate, uninfected
4 GSM486970 Spleen_infected_4weeks_rep1 46,643 Queensland Institute of Medical Research 2009-12-17 [Bead Array] Illumina mouse-6 v1.1 expression beadchip [Array_Address_Id version] (GPL6481) RNA Mus musculus
Mus musculus		 spleen Spleen homogenate, infected, 4 weeks
5 GSM486971 Spleen_infected_4weeks_rep2 46,643 Queensland Institute of Medical Research 2009-12-17 [Bead Array] Illumina mouse-6 v1.1 expression beadchip [Array_Address_Id version] (GPL6481) RNA Mus musculus
Mus musculus		 spleen Spleen homogenate, infected, 4 weeks
6 GSM486972 Spleen_infected_6weeks_rep1 46,643 Queensland Institute of Medical Research 2009-12-17 [Bead Array] Illumina mouse-6 v1.1 expression beadchip [Array_Address_Id version] (GPL6481) RNA Mus musculus
Mus musculus		 spleen Spleen homogenate, infected, 6 weeks
7 GSM486973 Spleen_infected_6weeks_rep2 46,643 Queensland Institute of Medical Research 2009-12-17 [Bead Array] Illumina mouse-6 v1.1 expression beadchip [Array_Address_Id version] (GPL6481) RNA Mus musculus
Mus musculus		 spleen Spleen homogenate, infected, 6 weeks
8 GSM486974 Spleen_infected_7weeks_rep1 46,643 Queensland Institute of Medical Research 2009-12-17 [Bead Array] Illumina mouse-6 v1.1 expression beadchip [Array_Address_Id version] (GPL6481) RNA Mus musculus
Mus musculus		 spleen Spleen homogenate, infected, 7 weeks
9 GSM486975 Spleen_infected_7weeks_rep2 46,643 Queensland Institute of Medical Research 2009-12-17 [Bead Array] Illumina mouse-6 v1.1 expression beadchip [Array_Address_Id version] (GPL6481) RNA Mus musculus
Mus musculus		 spleen Spleen homogenate, infected, 7 weeks
10 GSM488138 Oct4 shRNA replicate 1 46,643 Mt. Sinai School of Medicine 2009-12-20 [Bead Array] Illumina mouse-6 v1.1 expression beadchip [Array_Address_Id version] (GPL6481) RNA Mus musculus
Mus musculus		 unclassified source_name:Oct4 shRNA replicate 1 title:Oct4 shRNA replicate 1 description:Expressing Oct4 shRNA
11 GSM488139 Oct4 shRNA replicate 2 46,643 Mt. Sinai School of Medicine 2009-12-20 [Bead Array] Illumina mouse-6 v1.1 expression beadchip [Array_Address_Id version] (GPL6481) RNA Mus musculus
Mus musculus		 unclassified source_name:Oct4 shRNA replicate 2 title:Oct4 shRNA replicate 2 description:Expressing Oct4 shRNA
12 GSM488140 GFP shRNA replicate 1 46,643 Mt. Sinai School of Medicine 2009-12-20 [Bead Array] Illumina mouse-6 v1.1 expression beadchip [Array_Address_Id version] (GPL6481) RNA Mus musculus
Mus musculus		 unclassified source_name:GFP shRNA replicate 1 title:GFP shRNA replicate 1 description:Expressing GFP shRNA
13 GSM488141 GFP shRNA replicate 2 46,643 Mt. Sinai School of Medicine 2009-12-20 [Bead Array] Illumina mouse-6 v1.1 expression beadchip [Array_Address_Id version] (GPL6481) RNA Mus musculus
Mus musculus		 unclassified source_name:GFP shRNA replicate 2 title:GFP shRNA replicate 2 description:Expressing GFP shRNA
14 GSM461505 Lateral ventricle wall ependymal cells rep 1 46,632 Lund University 2009-10-13 [Bead Array] Illumina mouse-6 v1.1 expression beadchip (GPL6105) RNA Mus musculus
Mus musculus		 pooled Lateral ventricle wall ependymal cells, FACS isolated, CD133+/CD24+/CD45neg/CD34neg
15 GSM461506 Lateral ventricle wall ependymal cells rep 2 46,632 Lund University 2009-10-13 [Bead Array] Illumina mouse-6 v1.1 expression beadchip (GPL6105) RNA Mus musculus
Mus musculus		 pooled Lateral ventricle wall ependymal cells, FACS isolated, CD133+/CD24+/CD45neg/CD34neg
16 GSM461507 Lateral ventricle wall ependymal cells rep 3 46,632 Lund University 2009-10-13 [Bead Array] Illumina mouse-6 v1.1 expression beadchip (GPL6105) RNA Mus musculus
Mus musculus		 pooled Lateral ventricle wall ependymal cells, FACS isolated, CD133+/CD24+/CD45neg/CD34neg
17 GSM461508 Spinal cord ependymal cells rep 1 46,632 Lund University 2009-10-13 [Bead Array] Illumina mouse-6 v1.1 expression beadchip (GPL6105) RNA Mus musculus
Mus musculus		 pooled Spinal cord ependymal cells, FACS isolated, CD133+/CD24+/CD45neg/CD34neg
18 GSM461509 Spinal cord ependymal cells rep 2 46,632 Lund University 2009-10-13 [Bead Array] Illumina mouse-6 v1.1 expression beadchip (GPL6105) RNA Mus musculus
Mus musculus		 pooled Spinal cord ependymal cells, FACS isolated, CD133+/CD24+/CD45neg/CD34neg
19 GSM461510 Spinal cord ependymal cells rep 3 46,632 Lund University 2009-10-13 [Bead Array] Illumina mouse-6 v1.1 expression beadchip (GPL6105) RNA Mus musculus
Mus musculus		 pooled Spinal cord ependymal cells, FACS isolated, CD133+/CD24+/CD45neg/CD34neg
20 GSM461511 E14.5 radial glia cells rep 1 46,632 Lund University 2009-10-13 [Bead Array] Illumina mouse-6 v1.1 expression beadchip (GPL6105) RNA Mus musculus
Mus musculus		 pooled embryonic forebrain, radial glia cells, FACS isolated, CD133+/CD24neg/CD45neg/CD34neg
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