Gene Expression Omnibus (GEO) Overview Version´╝Ü2014-04-12Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data Unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(17,432)
  Primates
(665)
  Rodents
(7,826)
  Mammals
(399)
  Vertebrates
(731)
  Invertebrates
(1,567)
  Plants
(3,435)
  Bacteria
(998)
  Viruses
(14)
  Phages
(0)
  Unclassified
(76)
  All
(33,163)
 
  SAGE NlaIII
(1)
  SAGE RsaI
(0)
  SAGE Sau3A
(0)
  MPSS
(0)
  GeneChip
(2,864)
  Tiling Array
(48)
  cDNA Array
(80)
  Oligo Array
(4,122)
  Bead Array
(598)
  Protein Array
(0)
  Antibody
(0)
  RT-PCR
(19)
  HT-Seq
(85)
  Other
(9)
  All
(7,826)
 
  brain
(385)
  blood
(427)
  connective
(148)
  reproductive
(61)
  muscular
(121)
  digestive
(158)
  liver
(629)
  lung
(100)
  urinary
(151)
  endo/exo-crine
(258)
  embryo
(28)
  adult aerial structure
(0)
  young aerial structure
(0)
  root
(0)
  meristem/growing tissue
(0)
  flower/sexual organ
(0)
  seed/fruit/grain
(0)
  pooled
(156)
  unclassified
(242)
  all
(2,864)
 
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Sample ID Title Number of Data Institute Submission date Platform Sample type Species Organ class Reasoning of the classification
Keywords used for the classification are shown with bold font.
1 GSM418155 Z/Norrin mouse yolk sac E8.5 replicate 3 45,101 Johns Hopkins School of Medicine 2009-06-17 [GeneChip] [Mouse430_2] Affymetrix Mouse Genome 430 2.0 Array (GPL1261) RNA Mus musculus
Mus musculus
unclassified source_name:Z/Norrin mouse yolk sac E8.5 title:Z/Norrin mouse yolk sac E8.5 replicate 3 description:contact Xin Ye (xye4@jhmi.edu) for details
2 GSM418148 Z/Norrin mouse yolk sac E8.5 replicate 2 45,101 Johns Hopkins School of Medicine 2009-06-17 [GeneChip] [Mouse430_2] Affymetrix Mouse Genome 430 2.0 Array (GPL1261) RNA Mus musculus
Mus musculus
unclassified source_name:Z/Norrin mouse yolk sac E8.5 title:Z/Norrin mouse yolk sac E8.5 replicate 2 description:contact Xin Ye (xye4@jhmi.edu) for details
3 GSM418147 Z/Norrin mouse yolk sac E8.5 replicate 1 45,101 Johns Hopkins School of Medicine 2009-06-17 [GeneChip] [Mouse430_2] Affymetrix Mouse Genome 430 2.0 Array (GPL1261) RNA Mus musculus
Mus musculus
unclassified source_name:Z/Norrin mouse yolk sac E8.5 title:Z/Norrin mouse yolk sac E8.5 replicate 1 description:contact Xin Ye (xye4@jhmi.edu) for details
4 GSM418167 Z/Norrin mouse yolk sac E10.5 replicate 3 45,101 Johns Hopkins School of Medicine 2009-06-17 [GeneChip] [Mouse430_2] Affymetrix Mouse Genome 430 2.0 Array (GPL1261) RNA Mus musculus
Mus musculus
unclassified source_name:Z/Norrin mouse yolk sac E10.5 title:Z/Norrin mouse yolk sac E10.5 replicate 3 description:contact Xin Ye (xye4@jhmi.edu) for details
5 GSM418166 Z/Norrin mouse yolk sac E10.5 replicate 2 45,101 Johns Hopkins School of Medicine 2009-06-17 [GeneChip] [Mouse430_2] Affymetrix Mouse Genome 430 2.0 Array (GPL1261) RNA Mus musculus
Mus musculus
unclassified source_name:Z/Norrin mouse yolk sac E10.5 title:Z/Norrin mouse yolk sac E10.5 replicate 2 description:contact Xin Ye (xye4@jhmi.edu) for details
6 GSM418165 Z/Norrin mouse yolk sac E10.5 replicate 1 45,101 Johns Hopkins School of Medicine 2009-06-17 [GeneChip] [Mouse430_2] Affymetrix Mouse Genome 430 2.0 Array (GPL1261) RNA Mus musculus
Mus musculus
unclassified source_name:Z/Norrin mouse yolk sac E10.5 title:Z/Norrin mouse yolk sac E10.5 replicate 1 description:contact Xin Ye (xye4@jhmi.edu) for details
7 GSM388881 Xen cells 35,557 University of Toronto 2009-04-02 [GeneChip] [MoGene-1_0-st] Affymetrix Mouse Gene 1.0 ST Array [transcript (gene) version] (GPL6246) RNA Mus musculus
Mus musculus
embryo extraembryonic endoderm stem cells
8 GSM403221 wt_d26_rep2 45,101 Baylor College of Medicine 2009-05-14 [GeneChip] [Mouse430_2] Affymetrix Mouse Genome 430 2.0 Array (GPL1261) RNA Mus musculus
Mus musculus
ovary ovary from 26-day-old wild type mice
9 GSM403220 wt_d26_rep1 45,101 Baylor College of Medicine 2009-05-14 [GeneChip] [Mouse430_2] Affymetrix Mouse Genome 430 2.0 Array (GPL1261) RNA Mus musculus
Mus musculus
ovary ovary from 26-day-old wild type mice
10 GSM423690 WT_3 45,037 Banyu Tsukuba Research Institute 2009-06-30 [GeneChip] [Mouse430_2] Affymetrix Mouse Genome 430 2.0 Array (GPL1261) RNA Mus musculus
Mus musculus
stomach Gene expression data from glandular stomach of wild-type mouse
11 GSM423689 WT_2 45,037 Banyu Tsukuba Research Institute 2009-06-30 [GeneChip] [Mouse430_2] Affymetrix Mouse Genome 430 2.0 Array (GPL1261) RNA Mus musculus
Mus musculus
stomach Gene expression data from glandular stomach of wild-type mouse
12 GSM423688 WT_1 45,037 Banyu Tsukuba Research Institute 2009-06-30 [GeneChip] [Mouse430_2] Affymetrix Mouse Genome 430 2.0 Array (GPL1261) RNA Mus musculus
Mus musculus
stomach Gene expression data from glandular stomach of wild-type mouse
13 GSM395390 WTmouseTcell_d6_rep3 45,101 University of Pennsylvania 2009-04-20 [GeneChip] [Mouse430_2] Affymetrix Mouse Genome 430 2.0 Array (GPL1261) RNA Mus musculus
Mus musculus
pooled Donor WT OTI CD8+ T cells sorted from blood and spleen 6 days following infection
14 GSM395389 WTmouseTcell_d6_rep2 45,101 University of Pennsylvania 2009-04-20 [GeneChip] [Mouse430_2] Affymetrix Mouse Genome 430 2.0 Array (GPL1261) RNA Mus musculus
Mus musculus
pooled Donor WT OTI CD8+ T cells sorted from blood and spleen 6 days following infection
15 GSM395388 WTmouseTcell_d6_rep1 45,101 University of Pennsylvania 2009-04-20 [GeneChip] [Mouse430_2] Affymetrix Mouse Genome 430 2.0 Array (GPL1261) RNA Mus musculus
Mus musculus
pooled Donor WT OTI CD8+ T cells sorted from blood and spleen 6 days following infection
16 GSM395398 WTmouseTcell_d10_rep5 45,101 University of Pennsylvania 2009-04-20 [GeneChip] [Mouse430_2] Affymetrix Mouse Genome 430 2.0 Array (GPL1261) RNA Mus musculus
Mus musculus
pooled Donor WT OTI CD8+ T cells sorted from blood and spleen 10 days following infection
17 GSM395397 WTmouseTcell_d10_rep4 45,101 University of Pennsylvania 2009-04-20 [GeneChip] [Mouse430_2] Affymetrix Mouse Genome 430 2.0 Array (GPL1261) RNA Mus musculus
Mus musculus
pooled Donor WT OTI CD8+ T cells sorted from blood and spleen 10 days following infection
18 GSM395396 WTmouseTcell_d10_rep3 45,101 University of Pennsylvania 2009-04-20 [GeneChip] [Mouse430_2] Affymetrix Mouse Genome 430 2.0 Array (GPL1261) RNA Mus musculus
Mus musculus
pooled Donor WT OTI CD8+ T cells sorted from blood and spleen 10 days following infection
19 GSM395395 WTmouseTcell_d10_rep2 45,101 University of Pennsylvania 2009-04-20 [GeneChip] [Mouse430_2] Affymetrix Mouse Genome 430 2.0 Array (GPL1261) RNA Mus musculus
Mus musculus
pooled Donor WT OTI CD8+ T cells sorted from blood and spleen 10 days following infection
20 GSM395394 WTmouseTcell_d10_rep1 45,101 University of Pennsylvania 2009-04-20 [GeneChip] [Mouse430_2] Affymetrix Mouse Genome 430 2.0 Array (GPL1261) RNA Mus musculus
Mus musculus
pooled Donor WT OTI CD8+ T cells sorted from blood and spleen 10 days following infection
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