Gene Expression Omnibus (GEO) Overview Version：2013-06-15Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data Unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(521,594)		   Primates
(5,069)		   Rodents
(189,292)		   Mammals
(16,929)		   Vertebrates
(18,759)		   Invertebrates
(38,793)		   Plants
(93,301)		   Bacteria
(39,613)		   Viruses
(1,263)		   Phages
(101)		   Unclassified
(5,497)		   All
(931,947)		  
  SAGE NlaIII
(718)		   SAGE RsaI
(3)		   SAGE Sau3A
(37)		   MPSS
(100)		   GeneChip
(94,264)		   Tiling Array
(2,050)		   cDNA Array
(11,257)		   Oligo Array
(54,809)		   Bead Array
(14,658)		   Protein Array
(0)		   Antibody
(26)		   RT-PCR
(985)		   HT-Seq
(9,960)		   Other
(425)		   All
(189,292)		  
  brain
(16,378)		   blood
(12,770)		   connective
(6,514)		   reproductive
(4,020)		   muscular
(7,124)		   digestive
(2,959)		   liver
(10,947)		   lung
(4,790)		   urinary
(2,841)		   endo/exo-crine
(3,647)		   embryo
(3,914)		   adult aerial structure
(0)		   young aerial structure
(0)		   root
(0)		   meristem/growing tissue
(0)		   flower/sexual organ
(0)		   seed/fruit/grain
(0)		   pooled
(3,619)		   unclassified
(14,741)		   all
(94,264)		  
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Sample ID Title Number of Data Institute Submission date Platform Sample type Species Organ class Reasoning of the classification
Keywords used for the classification are shown with bold font.
1 GSM285938 Met_LymphNode_E_6 LN 61,359 UCDHSC 2008-05-01 [GeneChip] [U133_X3P] Affymetrix Human X3P Array (GPL1352) RNA Mus musculus
Mus musculus		 lymphnode Laser Captured Metastastic Lymph Node from E treated mouse #6
2 GSM285939 Met_LymphNode_EWD_10 LN 61,359 UCDHSC 2008-05-01 [GeneChip] [U133_X3P] Affymetrix Human X3P Array (GPL1352) RNA Mus musculus
Mus musculus		 lymphnode Laser Captured Metastastic Lymph Node from EWD treated mouse #10
3 GSM285941 Met_LymphNode_E_11 LN 61,359 UCDHSC 2008-05-01 [GeneChip] [U133_X3P] Affymetrix Human X3P Array (GPL1352) RNA Mus musculus
Mus musculus		 lymphnode Laser Captured Metastastic Lymph Node from E treated mouse #11
4 GSM285943 Met_LymphNode_E_14 LN 61,359 UCDHSC 2008-05-01 [GeneChip] [U133_X3P] Affymetrix Human X3P Array (GPL1352) RNA Mus musculus
Mus musculus		 lymphnode Laser Captured Metastastic Lymph Node from E treated mouse #14
5 GSM285945 Met_LymphNode_EWD_19 LN 61,359 UCDHSC 2008-05-01 [GeneChip] [U133_X3P] Affymetrix Human X3P Array (GPL1352) RNA Mus musculus
Mus musculus		 lymphnode Laser Captured Metastastic Lymph Node from EWD treated mouse #19
6 GSM285947 Met_LymphNode_EWD_9 LN 61,359 UCDHSC 2008-05-01 [GeneChip] [U133_X3P] Affymetrix Human X3P Array (GPL1352) RNA Mus musculus
Mus musculus		 lymphnode Laser Captured Metastastic Lymph Node from EWD treated mouse #9
7 GSM638282 Pre-selection DP thymocytes Replicate 1 1,814 The Scripps Research Institute 2010-12-10 [GeneChip] [scrGLYCO-v1F] Custom Affymetrix Glyco v1 GeneChip (GPL11093) RNA Mus musculus
Mus musculus		 thymus Highly purified pre-selection CD4+8+ thymocytes
8 GSM638283 Pre-selection DP thymocytes Replicate 2 1,814 The Scripps Research Institute 2010-12-10 [GeneChip] [scrGLYCO-v1F] Custom Affymetrix Glyco v1 GeneChip (GPL11093) RNA Mus musculus
Mus musculus		 thymus Highly purified pre-selection CD4+8+ thymocytes
9 GSM638284 Post-selection DP thymocytes Replicate 1 1,814 The Scripps Research Institute 2010-12-10 [GeneChip] [scrGLYCO-v1F] Custom Affymetrix Glyco v1 GeneChip (GPL11093) RNA Mus musculus
Mus musculus		 thymus Post-selection (post-positive selection) DP thymocytes
10 GSM638287 Naive CD8 T cells Replicate 1 1,814 The Scripps Research Institute 2010-12-10 [GeneChip] [scrGLYCO-v1F] Custom Affymetrix Glyco v1 GeneChip (GPL11093) RNA Mus musculus
Mus musculus		 lymphnode Naïve (CD44lo) CD8 T cells from lymph node
11 GSM638288 Naive CD8 T cells Replicate 2 1,814 The Scripps Research Institute 2010-12-10 [GeneChip] [scrGLYCO-v1F] Custom Affymetrix Glyco v1 GeneChip (GPL11093) RNA Mus musculus
Mus musculus		 lymphnode Naïve (CD44lo) CD8 T cells from lymph node
12 GSM651201 B Cells, fresh, replicate #1 1,814 The Scripps Research Institute 2011-01-06 [GeneChip] [scrGLYCO-v1F] Custom Affymetrix Glyco v1 GeneChip (GPL11093) RNA Mus musculus
Mus musculus		 lymphnode Unactivated B Cells
13 GSM651202 B Cells, fresh, replicate #2 1,814 The Scripps Research Institute 2011-01-06 [GeneChip] [scrGLYCO-v1F] Custom Affymetrix Glyco v1 GeneChip (GPL11093) RNA Mus musculus
Mus musculus		 lymphnode Unactivated B Cells
14 GSM651203 B Cells, fresh, replicate #3 1,814 The Scripps Research Institute 2011-01-06 [GeneChip] [scrGLYCO-v1F] Custom Affymetrix Glyco v1 GeneChip (GPL11093) RNA Mus musculus
Mus musculus		 lymphnode Unactivated B Cells
15 GSM651204 B Cells, Activated with aIgM, replicate #1 1,814 The Scripps Research Institute 2011-01-06 [GeneChip] [scrGLYCO-v1F] Custom Affymetrix Glyco v1 GeneChip (GPL11093) RNA Mus musculus
Mus musculus		 lymphnode B Cells activated with algM
16 GSM651205 B Cells, Activated with aIgM, replicate #2 1,814 The Scripps Research Institute 2011-01-06 [GeneChip] [scrGLYCO-v1F] Custom Affymetrix Glyco v1 GeneChip (GPL11093) RNA Mus musculus
Mus musculus		 lymphnode B Cells activated with algM
17 GSM651206 B Cells, Activated with aIgM, replicate #3 1,814 The Scripps Research Institute 2011-01-06 [GeneChip] [scrGLYCO-v1F] Custom Affymetrix Glyco v1 GeneChip (GPL11093) RNA Mus musculus
Mus musculus		 lymphnode B Cells activated with algM
18 GSM651207 CD4+ Lymphocyte, fresh, replicate #1 1,814 The Scripps Research Institute 2011-01-06 [GeneChip] [scrGLYCO-v1F] Custom Affymetrix Glyco v1 GeneChip (GPL11093) RNA Mus musculus
Mus musculus		 lymphnode Unactivated CD4 lymphocytes
19 GSM651208 CD4+ Lymphocyte, fresh, replicate #2 1,814 The Scripps Research Institute 2011-01-06 [GeneChip] [scrGLYCO-v1F] Custom Affymetrix Glyco v1 GeneChip (GPL11093) RNA Mus musculus
Mus musculus		 lymphnode Unactivated CD4 lymphocytes
20 GSM651209 CD4+ Lymphocyte, fresh, replicate #3 1,814 The Scripps Research Institute 2011-01-06 [GeneChip] [scrGLYCO-v1F] Custom Affymetrix Glyco v1 GeneChip (GPL11093) RNA Mus musculus
Mus musculus		 lymphnode Unactivated CD4 lymphocytes
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