Gene Expression Omnibus (GEO) Overview Version:2013-04-06Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data Unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(17,356)
  Primates
(665)
  Rodents
(7,771)
  Mammals
(399)
  Vertebrates
(703)
  Invertebrates
(1,567)
  Plants
(3,435)
  Bacteria
(998)
  Viruses
(14)
  Phages
(0)
  Unclassified
(76)
  All
(33,004)
 
  SAGE NlaIII
(1)
  SAGE RsaI
(0)
  SAGE Sau3A
(0)
  MPSS
(0)
  GeneChip
(2,864)
  Tiling Array
(48)
  cDNA Array
(80)
  Oligo Array
(4,067)
  Bead Array
(598)
  Protein Array
(0)
  Antibody
(0)
  RT-PCR
(19)
  HT-Seq
(85)
  Other
(9)
  All
(7,771)
 
  brain
(385)
  blood
(427)
  connective
(148)
  reproductive
(61)
  muscular
(121)
  digestive
(158)
  liver
(629)
  lung
(100)
  urinary
(151)
  endo/exo-crine
(258)
  embryo
(28)
  adult aerial structure
(0)
  young aerial structure
(0)
  root
(0)
  meristem/growing tissue
(0)
  flower/sexual organ
(0)
  seed/fruit/grain
(0)
  pooled
(156)
  unclassified
(242)
  all
(2,864)
 
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Sample ID Title Number of Data Institute Submission date Platform Sample type Species Organ class Reasoning of the classification
Keywords used for the classification are shown with bold font.
1 GSM393476 wild type dendritic cells unstimulated EGTA 22,690 University of Milano-Bicocca 2009-04-17 [GeneChip] [Mouse430A_2] Affymetrix Mouse Genome 430A 2.0 Array (GPL8321) RNA Mus musculus
Mus musculus
bone marrow bone marrow derived dendritic cells
2 GSM393498 wild type dendritic cells unstimulated (apoptosis) 22,690 University of Milano-Bicocca 2009-04-17 [GeneChip] [Mouse430A_2] Affymetrix Mouse Genome 430A 2.0 Array (GPL8321) RNA Mus musculus
Mus musculus
bone marrow bone marrow derived dendritic cells
3 GSM393470 wild type dendritic cells unstimulated 22,690 University of Milano-Bicocca 2009-04-17 [GeneChip] [Mouse430A_2] Affymetrix Mouse Genome 430A 2.0 Array (GPL8321) RNA Mus musculus
Mus musculus
bone marrow bone marrow derived dendritic cells
4 GSM393502 wild type dendritic cells stimulated with LPS for 60 hours in presence of thapsigargin 22,690 University of Milano-Bicocca 2009-04-17 [GeneChip] [Mouse430A_2] Affymetrix Mouse Genome 430A 2.0 Array (GPL8321) RNA Mus musculus
Mus musculus
bone marrow bone marrow derived dendritic cells
5 GSM393500 wild type dendritic cells stimulated with LPS for 60 hours 22,690 University of Milano-Bicocca 2009-04-17 [GeneChip] [Mouse430A_2] Affymetrix Mouse Genome 430A 2.0 Array (GPL8321) RNA Mus musculus
Mus musculus
bone marrow bone marrow derived dendritic cells
6 GSM393479 wild type dendritic cells stimulated with LPS for 6 hours in presence of EGTA 22,690 University of Milano-Bicocca 2009-04-17 [GeneChip] [Mouse430A_2] Affymetrix Mouse Genome 430A 2.0 Array (GPL8321) RNA Mus musculus
Mus musculus
bone marrow bone marrow derived dendritic cells
7 GSM393473 wild type dendritic cells stimulated with LPS for 6 hours 22,690 University of Milano-Bicocca 2009-04-17 [GeneChip] [Mouse430A_2] Affymetrix Mouse Genome 430A 2.0 Array (GPL8321) RNA Mus musculus
Mus musculus
bone marrow bone marrow derived dendritic cells
8 GSM393501 wild type dendritic cells stimulated with LPS for 48 hours in presence of thapsigargin 22,690 University of Milano-Bicocca 2009-04-17 [GeneChip] [Mouse430A_2] Affymetrix Mouse Genome 430A 2.0 Array (GPL8321) RNA Mus musculus
Mus musculus
bone marrow bone marrow derived dendritic cells
9 GSM393499 wild type dendritic cells stimulated with LPS for 48 hours 22,690 University of Milano-Bicocca 2009-04-17 [GeneChip] [Mouse430A_2] Affymetrix Mouse Genome 430A 2.0 Array (GPL8321) RNA Mus musculus
Mus musculus
bone marrow bone marrow derived dendritic cells
10 GSM393478 wild type dendritic cells stimulated with LPS for 4 hours in presence of EGTA 22,690 University of Milano-Bicocca 2009-04-17 [GeneChip] [Mouse430A_2] Affymetrix Mouse Genome 430A 2.0 Array (GPL8321) RNA Mus musculus
Mus musculus
bone marrow bone marrow derived dendritic cells
11 GSM393472 wild type dendritic cells stimulated with LPS for 4 hours 22,690 University of Milano-Bicocca 2009-04-17 [GeneChip] [Mouse430A_2] Affymetrix Mouse Genome 430A 2.0 Array (GPL8321) RNA Mus musculus
Mus musculus
bone marrow bone marrow derived dendritic cells
12 GSM393481 wild type dendritic cells stimulated with LPS for 24 hours in presence of EGTA 22,690 University of Milano-Bicocca 2009-04-17 [GeneChip] [Mouse430A_2] Affymetrix Mouse Genome 430A 2.0 Array (GPL8321) RNA Mus musculus
Mus musculus
bone marrow bone marrow derived dendritic cells
13 GSM393475 wild type dendritic cells stimulated with LPS for 24 hours 22,690 University of Milano-Bicocca 2009-04-17 [GeneChip] [Mouse430A_2] Affymetrix Mouse Genome 430A 2.0 Array (GPL8321) RNA Mus musculus
Mus musculus
bone marrow bone marrow derived dendritic cells
14 GSM393477 wild type dendritic cells stimulated with LPS for 2 hours in presence of EGTA 22,690 University of Milano-Bicocca 2009-04-17 [GeneChip] [Mouse430A_2] Affymetrix Mouse Genome 430A 2.0 Array (GPL8321) RNA Mus musculus
Mus musculus
bone marrow bone marrow derived dendritic cells
15 GSM393471 wild type dendritic cells stimulated with LPS for 2 hours 22,690 University of Milano-Bicocca 2009-04-17 [GeneChip] [Mouse430A_2] Affymetrix Mouse Genome 430A 2.0 Array (GPL8321) RNA Mus musculus
Mus musculus
bone marrow bone marrow derived dendritic cells
16 GSM393480 wild type dendritic cells stimulated with LPS for 12 hours in presence of EGTA 22,690 University of Milano-Bicocca 2009-04-17 [GeneChip] [Mouse430A_2] Affymetrix Mouse Genome 430A 2.0 Array (GPL8321) RNA Mus musculus
Mus musculus
bone marrow bone marrow derived dendritic cells
17 GSM393474 wild type dendritic cells stimulated with LPS for 12 hours 22,690 University of Milano-Bicocca 2009-04-17 [GeneChip] [Mouse430A_2] Affymetrix Mouse Genome 430A 2.0 Array (GPL8321) RNA Mus musculus
Mus musculus
bone marrow bone marrow derived dendritic cells
18 GSM399124 Whole Blood Everest Hypoxic 4_8457 45,101 University Eye Hospital and Centre for Ophthalmology Tübingen 2009-04-29 [GeneChip] [Mouse430_2] Affymetrix Mouse Genome 430 2.0 Array (GPL1261) RNA Mus musculus
Mus musculus
peripheral blood Whole Blood
19 GSM399122 Whole Blood Everest Hypoxic 3_8456 45,101 University Eye Hospital and Centre for Ophthalmology Tübingen 2009-04-29 [GeneChip] [Mouse430_2] Affymetrix Mouse Genome 430 2.0 Array (GPL1261) RNA Mus musculus
Mus musculus
peripheral blood Whole Blood
20 GSM399121 Whole Blood Everest Hypoxic 2_8453 45,101 University Eye Hospital and Centre for Ophthalmology Tübingen 2009-04-29 [GeneChip] [Mouse430_2] Affymetrix Mouse Genome 430 2.0 Array (GPL1261) RNA Mus musculus
Mus musculus
peripheral blood Whole Blood
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