Gene Expression Omnibus (GEO) Overview Version´╝Ü2014-04-12Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data Unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(615,734)
  Primates
(5,814)
  Rodents
(225,055)
  Mammals
(20,968)
  Vertebrates
(22,581)
  Invertebrates
(46,584)
  Plants
(107,706)
  Bacteria
(45,091)
  Viruses
(1,432)
  Phages
(112)
  Unclassified
(6,986)
  All
(1,101,311)
 
  SAGE NlaIII
(718)
  SAGE RsaI
(3)
  SAGE Sau3A
(37)
  MPSS
(100)
  GeneChip
(108,928)
  Tiling Array
(2,164)
  cDNA Array
(11,311)
  Oligo Array
(60,928)
  Bead Array
(21,037)
  Protein Array
(0)
  Antibody
(28)
  RT-PCR
(1,166)
  HT-Seq
(17,667)
  Other
(968)
  All
(225,055)
 
  brain
(18,058)
  blood
(14,514)
  connective
(7,942)
  reproductive
(4,503)
  muscular
(7,866)
  digestive
(3,287)
  liver
(12,974)
  lung
(5,211)
  urinary
(3,093)
  endo/exo-crine
(4,663)
  embryo
(4,368)
  adult aerial structure
(0)
  young aerial structure
(0)
  root
(0)
  meristem/growing tissue
(0)
  flower/sexual organ
(0)
  seed/fruit/grain
(0)
  pooled
(3,964)
  unclassified
(18,485)
  all
(108,928)
 
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Sample ID Title Number of Data Institute Submission date Platform Sample type Species Organ class Reasoning of the classification
Keywords used for the classification are shown with bold font.
1 GSM248431 X_intercept 0 General Electric 2007-12-11 [GeneChip] [RG_U34A] Affymetrix Rat Genome U34 Array (GPL85) RNA Rattus norvegicus
Rattus norvegicus
liver/hepato Liver from Male rats receiving corn oil
2 GSM248432 Male_TCDD_Medium 0 General Electric 2007-12-11 [GeneChip] [RG_U34A] Affymetrix Rat Genome U34 Array (GPL85) RNA Rattus norvegicus
Rattus norvegicus
liver/hepato Liver from Male Rats receiving 0.3ug/kg/d TCDD and male corn oil controls
3 GSM248433 Male_TCDD_High 0 General Electric 2007-12-11 [GeneChip] [RG_U34A] Affymetrix Rat Genome U34 Array (GPL85) RNA Rattus norvegicus
Rattus norvegicus
liver/hepato Liver from Male Rats receiving 3ug/kg/d TCDD and male corn oil controls
4 GSM248434 Male_Aroclor_Low 0 General Electric 2007-12-11 [GeneChip] [RG_U34A] Affymetrix Rat Genome U34 Array (GPL85) RNA Rattus norvegicus
Rattus norvegicus
liver/hepato Liver from Male Rats receiving 0.6mg/kg/d Aroclor and male corn oil controls
5 GSM248435 Male_Aroclor_Medium 0 General Electric 2007-12-11 [GeneChip] [RG_U34A] Affymetrix Rat Genome U34 Array (GPL85) RNA Rattus norvegicus
Rattus norvegicus
liver/hepato Liver from Male Rats receiving 6mg/kg/d Aroclor and male corn oil controls
6 GSM248436 Male_Aroclor_High 0 General Electric 2007-12-11 [GeneChip] [RG_U34A] Affymetrix Rat Genome U34 Array (GPL85) RNA Rattus norvegicus
Rattus norvegicus
liver/hepato Liver from Male Rats receiving 60mg/kg/d Aroclor and male corn oil controls
7 GSM248437 Gender_Baseline_Difference 0 General Electric 2007-12-11 [GeneChip] [RG_U34A] Affymetrix Rat Genome U34 Array (GPL85) RNA Rattus norvegicus
Rattus norvegicus
liver/hepato Liver from Female Rats receiving corn oil
8 GSM248438 Female_TCDD_Medium 0 General Electric 2007-12-11 [GeneChip] [RG_U34A] Affymetrix Rat Genome U34 Array (GPL85) RNA Rattus norvegicus
Rattus norvegicus
liver/hepato Liver from Female Rats receiving 0.3ug/kg/d TCDD and female corn oil controls
9 GSM248439 Female_TCDD_High 0 General Electric 2007-12-11 [GeneChip] [RG_U34A] Affymetrix Rat Genome U34 Array (GPL85) RNA Rattus norvegicus
Rattus norvegicus
liver/hepato Liver from Female Rats receiving 3ug/kg/d TCDD and female corn oil controls
10 GSM248440 Female_Aroclor_Low 0 General Electric 2007-12-11 [GeneChip] [RG_U34A] Affymetrix Rat Genome U34 Array (GPL85) RNA Rattus norvegicus
Rattus norvegicus
liver/hepato Liver from Female Rats receiving 0.6mg/kg/d Aroclor and female corn oil controls
11 GSM248441 Female_Aroclor_Medium 0 General Electric 2007-12-11 [GeneChip] [RG_U34A] Affymetrix Rat Genome U34 Array (GPL85) RNA Rattus norvegicus
Rattus norvegicus
liver/hepato Liver from Female Rats receiving 6mg/kg/d Aroclor and female corn oil controls
12 GSM248442 Female_Aroclor_High 0 General Electric 2007-12-11 [GeneChip] [RG_U34A] Affymetrix Rat Genome U34 Array (GPL85) RNA Rattus norvegicus
Rattus norvegicus
liver/hepato Liver from Female Rats receiving 60mg/kg/d Aroclor and female corn oil controls
13 GSM263068 2597 Myclobutanil 2000ppm Liver 0 US EPA 2008-02-06 [GeneChip] [Rat230_2] Affymetrix Rat Genome 230 2.0 Array (GPL1355) RNA Rattus norvegicus
Rattus norvegicus
liver/hepato 2597 Myclobutanil 2000ppm Liver
14 GSM263075 2630 Propiconazole 500ppm Liver 0 US EPA 2008-02-06 [GeneChip] [Rat230_2] Affymetrix Rat Genome 230 2.0 Array (GPL1355) RNA Rattus norvegicus
Rattus norvegicus
liver/hepato 2630 Propiconazole 500ppm Liver
15 GSM263076 2633 Propiconazole 500ppm Liver 0 US EPA 2008-02-06 [GeneChip] [Rat230_2] Affymetrix Rat Genome 230 2.0 Array (GPL1355) RNA Rattus norvegicus
Rattus norvegicus
liver/hepato 2633 Propiconazole 500ppm Liver
16 GSM299302 Igg1 0 University of Michigan 2008-06-20 [GeneChip] [Mm_PromPR] Affymetrix Mouse Promoter 1.0R Array (GPL5811) genomic Mus musculus
Mus musculus
liver/hepato hepatoma cells, IgG
17 GSM299303 Igg2 0 University of Michigan 2008-06-20 [GeneChip] [Mm_PromPR] Affymetrix Mouse Promoter 1.0R Array (GPL5811) genomic Mus musculus
Mus musculus
liver/hepato hepatoma cells, IgG
18 GSM299304 Igg3 0 University of Michigan 2008-06-20 [GeneChip] [Mm_PromPR] Affymetrix Mouse Promoter 1.0R Array (GPL5811) genomic Mus musculus
Mus musculus
liver/hepato hepatoma cells, IgG
19 GSM299305 Igg4 0 University of Michigan 2008-06-20 [GeneChip] [Mm_PromPR] Affymetrix Mouse Promoter 1.0R Array (GPL5811) genomic Mus musculus
Mus musculus
liver/hepato hepatoma cells, IgG
20 GSM299306 Ahr_DMSO1 0 University of Michigan 2008-06-20 [GeneChip] [Mm_PromPR] Affymetrix Mouse Promoter 1.0R Array (GPL5811) genomic Mus musculus
Mus musculus
liver/hepato hepatoma cells, DMSO 8hr
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