Gene Expression Omnibus (GEO) Overview Version´╝Ü2014-04-12Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data Unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(615,734)
  Primates
(5,814)
  Rodents
(225,055)
  Mammals
(20,968)
  Vertebrates
(22,581)
  Invertebrates
(46,584)
  Plants
(107,706)
  Bacteria
(45,091)
  Viruses
(1,432)
  Phages
(112)
  Unclassified
(6,986)
  All
(1,101,311)
 
  SAGE NlaIII
(718)
  SAGE RsaI
(3)
  SAGE Sau3A
(37)
  MPSS
(100)
  GeneChip
(108,928)
  Tiling Array
(2,164)
  cDNA Array
(11,311)
  Oligo Array
(60,928)
  Bead Array
(21,037)
  Protein Array
(0)
  Antibody
(28)
  RT-PCR
(1,166)
  HT-Seq
(17,667)
  Other
(968)
  All
(225,055)
 
  brain
(18,058)
  blood
(14,514)
  connective
(7,942)
  reproductive
(4,503)
  muscular
(7,866)
  digestive
(3,287)
  liver
(12,974)
  lung
(5,211)
  urinary
(3,093)
  endo/exo-crine
(4,663)
  embryo
(4,368)
  adult aerial structure
(0)
  young aerial structure
(0)
  root
(0)
  meristem/growing tissue
(0)
  flower/sexual organ
(0)
  seed/fruit/grain
(0)
  pooled
(3,964)
  unclassified
(18,485)
  all
(108,928)
 
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Sample ID Title Number of Data Institute Submission date Platform Sample type Species Organ class Reasoning of the classification
Keywords used for the classification are shown with bold font.
1 GSM999144 Intrakidney tumor 3 35,512 Peter MacCallum Cancer Centre 2012-09-07 [GeneChip] [MoGene-1_0-st] Affymetrix Mouse Gene 1.0 ST Array [transcript (gene) version] (GPL6246) RNA Mus musculus
Mus musculus
kidney Gene expression data from Renca cells growing in kidney lik6
2 GSM999143 Intrakidney tumor 2 35,512 Peter MacCallum Cancer Centre 2012-09-07 [GeneChip] [MoGene-1_0-st] Affymetrix Mouse Gene 1.0 ST Array [transcript (gene) version] (GPL6246) RNA Mus musculus
Mus musculus
kidney Gene expression data from Renca cells growing in kidney lik5
3 GSM999142 Intrakidney tumor 1 35,512 Peter MacCallum Cancer Centre 2012-09-07 [GeneChip] [MoGene-1_0-st] Affymetrix Mouse Gene 1.0 ST Array [transcript (gene) version] (GPL6246) RNA Mus musculus
Mus musculus
kidney Gene expression data from Renca cells growing in kidney lik4
4 GSM9931 db/db 16 wk 3 12,488 Case Western Reserve University 2003-09-09 [GeneChip] [MG_U74Av2] Affymetrix Murine Genome U74A Version 2 Array (GPL81) RNA Mus musculus
Mus musculus
kidney Kidney
5 GSM9930 db/db 16 wk 2 12,488 Case Western Reserve University 2003-09-09 [GeneChip] [MG_U74Av2] Affymetrix Murine Genome U74A Version 2 Array (GPL81) RNA Mus musculus
Mus musculus
kidney Kidney
6 GSM9929 db/db 16 wk 1 12,488 Case Western Reserve University 2003-09-09 [GeneChip] [MG_U74Av2] Affymetrix Murine Genome U74A Version 2 Array (GPL81) RNA Mus musculus
Mus musculus
kidney Kidney
7 GSM9928 db/db 8wk 3 12,488 Case Western Reserve University 2003-09-09 [GeneChip] [MG_U74Av2] Affymetrix Murine Genome U74A Version 2 Array (GPL81) RNA Mus musculus
Mus musculus
kidney Kidney
8 GSM9927 db/db 8wk 2 12,488 Case Western Reserve University 2003-09-09 [GeneChip] [MG_U74Av2] Affymetrix Murine Genome U74A Version 2 Array (GPL81) RNA Mus musculus
Mus musculus
kidney Kidney
9 GSM9926 db/db 8 wk 1 12,488 Case Western Reserve University 2003-09-09 [GeneChip] [MG_U74Av2] Affymetrix Murine Genome U74A Version 2 Array (GPL81) RNA Mus musculus
Mus musculus
kidney Kidney
10 GSM9925 db/m 16 wk 3 12,488 Case Western Reserve University 2003-09-09 [GeneChip] [MG_U74Av2] Affymetrix Murine Genome U74A Version 2 Array (GPL81) RNA Mus musculus
Mus musculus
kidney Kidney
11 GSM9924 db/m 16 wk 2 12,488 Case Western Reserve University 2003-09-09 [GeneChip] [MG_U74Av2] Affymetrix Murine Genome U74A Version 2 Array (GPL81) RNA Mus musculus
Mus musculus
kidney Kidney
12 GSM9923 db/m 16 wk1 12,488 Case Western Reserve University 2003-09-09 [GeneChip] [MG_U74Av2] Affymetrix Murine Genome U74A Version 2 Array (GPL81) RNA Mus musculus
Mus musculus
kidney Kidney
13 GSM9922 db/m 8wk 3 12,488 Case Western Reserve University 2003-09-09 [GeneChip] [MG_U74Av2] Affymetrix Murine Genome U74A Version 2 Array (GPL81) RNA Mus musculus
Mus musculus
kidney Kidney
14 GSM9921 db/m 8wk 2 12,488 Case Western Reserve University 2003-09-09 [GeneChip] [MG_U74Av2] Affymetrix Murine Genome U74A Version 2 Array (GPL81) RNA Mus musculus
Mus musculus
kidney Kidney
15 GSM9920 db/m 8wk 1 12,488 Case Western Reserve University 2003-09-09 [GeneChip] [MG_U74Av2] Affymetrix Murine Genome U74A Version 2 Array (GPL81) RNA Mus musculus
Mus musculus
kidney Kidney
16 GSM980669 Kidney D Lgr5 neg 35,556 Academic Medical Centre, University of Amsterdam 2012-08-03 [GeneChip] [MoGene-1_1-st] Affymetrix Mouse Gene 1.1 ST Array [transcript (gene) version] (GPL11533) RNA Mus musculus
Mus musculus
kidney FACS-sorted cells from cultured embryonic kidneys from Lgr5-EGFP-Ires-CreERT2 mice, Lgr5 negative
17 GSM980668 Kidney B Lgr5 pos 35,556 Academic Medical Centre, University of Amsterdam 2012-08-03 [GeneChip] [MoGene-1_1-st] Affymetrix Mouse Gene 1.1 ST Array [transcript (gene) version] (GPL11533) RNA Mus musculus
Mus musculus
kidney FACS-sorted cells from cultured embryonic kidneys from Lgr5-EGFP-Ires-CreERT2 mice, Lgr5 positive
18 GSM980667 Kidney B Lgr5 neg 35,556 Academic Medical Centre, University of Amsterdam 2012-08-03 [GeneChip] [MoGene-1_1-st] Affymetrix Mouse Gene 1.1 ST Array [transcript (gene) version] (GPL11533) RNA Mus musculus
Mus musculus
kidney FACS-sorted cells from cultured embryonic kidneys from Lgr5-EGFP-Ires-CreERT2 mice, Lgr5 negative
19 GSM980666 Kidney A Lgr5 pos 35,556 Academic Medical Centre, University of Amsterdam 2012-08-03 [GeneChip] [MoGene-1_1-st] Affymetrix Mouse Gene 1.1 ST Array [transcript (gene) version] (GPL11533) RNA Mus musculus
Mus musculus
kidney FACS-sorted cells from cultured embryonic kidneys from Lgr5-EGFP-Ires-CreERT2 mice, Lgr5 positive
20 GSM978884 3day_IRI0 45,101 kyoto prefectural university of medicine 2012-07-31 [GeneChip] [Mouse430_2] Affymetrix Mouse Genome 430 2.0 Array (GPL1261) RNA Mus musculus
Mus musculus
kidney Kidney exposed to 0 min IRI, collected at 3 day after IRI.
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