Gene Expression Omnibus (GEO) Overview Version´╝Ü2014-04-12Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(22,139)
  Primates
(288)
  Rodents
(15,364)
  Mammals
(970)
  Vertebrates
(1,364)
  Invertebrates
(4,819)
  Plants
(7,611)
  Bacteria
(3,409)
  Viruses
(59)
  Phages
(8)
  Unclassified
(433)
  All
(56,529)
 
  SAGE NlaIII
(76)
  SAGE RsaI
(1)
  SAGE Sau3A
(10)
  MPSS
(5)
  GeneChip
(7,316)
  Tiling Array
(312)
  cDNA Array
(732)
  Oligo Array
(3,361)
  Bead Array
(1,268)
  Protein Array
(0)
  Antibody
(5)
  RT-PCR
(117)
  HT-Seq
(2,116)
  Other
(45)
  All
(15,364)
 
1   |   2   |   3   |   4   |   5      »      [106]
Title Platform Institute Submission date Species Data size
(probes x samples)
Sample NCBI
FTP
site
Animal Plant  
brain blood connective reproductive muscular digestive liver lung urinary endo/exo-crine embryo adult aerial structure young aerial structure root meristem/growing tissue flower/sexual organ seed/fruit/grain pooled unclassified
1 Daily cycling of genome-wide histone methylation (GSE37393) [HT Sequencing] Illumina Genome Analyzer IIx (Mus musculus) (GPL11002) Institute of Metabolic Science 2012-04-18 Mus musculus
Mus musculus
20
(0 x 20)
8 12 by_platform
by_series
2 The histone methyltransferase MLL3 regulates genome-scale circadian transcription (GSE37396) [HT Sequencing] Illumina Genome Analyzer IIx (Mus musculus) (GPL11002) Institute of Metabolic Science 2012-04-18 Mus musculus
Mus musculus
20
(0 x 20)
8 12 by_platform
by_series
3 Regulation of constitutive and alternative splicing by PRMT5 reveals a role for Mdm4 pre-mRNA in sensing defects in the spliceosomal machinery (RNA-Seq) (GSE45284) [HT Sequencing] Illumina HiSeq 2000 (Mus musculus) (GPL13112) A*Star Singapore 2013-03-19 Mus musculus
Mus musculus
12
(0 x 12)
6 6 by_platform
by_series
4 Regulation of constitutive and alternative splicing by PRMT5 reveals a role for Mdm4 pre-mRNA in sensing defects in the spliceosomal machinery (GSE45285) [HT Sequencing] Illumina HiSeq 2000 (Mus musculus) (GPL13112) A*Star Singapore 2013-03-19 Mus musculus
Mus musculus
12
(0 x 12)
6 6 by_platform
by_series
5 Tau depletion prevents Ras/ERK-mediated excitotoxic immediate early gene activation and brain damage in stroke (GSE45703) [HT Sequencing] Illumina HiSeq 2000 (Mus musculus) (GPL13112) A*Star Singapore 2013-04-02 Mus musculus
Mus musculus
4
(0 x 4)
4 by_platform
by_series
6 A microRNA-directed program of cytotoxic CD8+ T cell differentiation (GSE51393) [HT Sequencing] Illumina HiSeq 2000 (Mus musculus) (GPL13112) Aalto University School of Science 2013-10-18 Mus musculus
Mus musculus
12
(0 x 12)
4 8 by_platform
by_series
7 RNA-Seq of control and ELL2-depleted MPC11 plasmacytoma cell lines (GSE40285) [HT Sequencing] AB SOLiD 4 System (Mus musculus) (GPL14602) Aalto University School of Science 2012-08-22 Mus musculus
Mus musculus
4
(0 x 4)
4 by_platform
by_series
8 The organizational effects of testosterone on brain DNA methylome (GSE50218) [HT Sequencing] Illumina HiSeq 2000 (Mus musculus domesticus) (GPL17637) Academia Sinica 2013-08-27 Mus musculus domesticus
Mus musculus domesticus
24
(0 x 24)
12 12 by_platform
by_series
9 Genome-wide occupancy profile of Tbx3, Gata4, Nkx2-5 and p300 in adult mouse whole heart (GSE35151) [HT Sequencing] Illumina Genome Analyzer IIx (Mus musculus) (GPL11002) Academic Medical Center Amsterdam 2012-01-17 Mus musculus
Mus musculus
4
(0 x 4)
4 by_platform
by_series
10 Cell type-specific epigenomic analysis in the developing heart (GSE55611) [HT Sequencing] AB 5500 Genetic Analyzer (Mus musculus) (GPL16790) Academic Medical Center Amsterdam 2014-03-05 Mus musculus
Mus musculus
2
(0 x 2)
2 by_platform
by_series
11 Genome-wide occupancy profile of Tbx3, Gata4, Nkx2-5 and p300 in adult mouse whole heart (GSE35151) [HT Sequencing] AB SOLiD System 3.0 (Mus musculus) (GPL9318) Academic Medical Center Amsterdam 2012-01-17 Mus musculus
Mus musculus
1
(0 x 1)
1 by_platform
by_series
12 Genome-wide occupancy profile of Tbx3 in adult mouse whole heart (GSE44821) [HT Sequencing] AB SOLiD System 3.0 (Mus musculus) (GPL9318) Academic Medical Center Amsterdam 2013-03-04 Mus musculus
Mus musculus
1
(0 x 1)
1 by_platform
by_series
13 Genome-wide binding pattern of PU.1 in normal erythroid progenitors and erythroleukemia cells (GSE21950) [HT Sequencing] Illumina Genome Analyzer II (Mus musculus) (GPL9250) Albert Einstein College of Medicine 2010-05-21 Mus musculus
Mus musculus
11
(0 x 11)
11 by_platform
by_series
14 PU.1 in normal erythroid progenitors and erythroleukemia cells (GSE21953) [HT Sequencing] Illumina Genome Analyzer II (Mus musculus) (GPL9250) Albert Einstein College of Medicine 2010-05-21 Mus musculus
Mus musculus
11
(0 x 11)
11 by_platform
by_series
15 SOX9: a Stem Cell Transcriptional Regulator of Secreted Niche Signaling Factors (GSE54424) [HT Sequencing] Illumina HiSeq 2000 (Mus musculus) (GPL13112) Albert Einstein college of medicine 2014-01-27 Mus musculus
Mus musculus
10
(0 x 10)
10 by_platform
by_series
16 Genome-wide occupancy map of GATA-1 in proliferating and differentiating murine ES cell derived erythroid progenitors (ES-EP) (GSE35379) [HT Sequencing] Illumina Genome Analyzer II (Mus musculus) (GPL9250) Albert Einstein College of Medicine 2012-01-27 Mus musculus
Mus musculus
6
(0 x 6)
6 by_platform
by_series
17 GATA-1 in proliferating and differentiating murine ES cell derived erythroid progenitors (GSE35385) [HT Sequencing] Illumina Genome Analyzer II (Mus musculus) (GPL9250) Albert Einstein College of Medicine 2012-01-27 Mus musculus
Mus musculus
6
(0 x 6)
6 by_platform
by_series
18 Genome-wide maps of DNA cytosine methylation state in during normal differentiation commitment in hematopoietic stem cells (HSC) and in Special AT-rich sequence-binding protein1 (Satb1) - deficient HSC (GSE44304) [HT Sequencing] Illumina HiSeq 2000 (Mus musculus) (GPL13112) Albert Einstein College of Medicine 2013-02-13 Mus musculus
Mus musculus
6
(0 x 6)
6 by_platform
by_series
19 RNA-seq transcriptome analysis of Nestin-GFP-peri and -GFP-retic bone marrow stromal cells (GSE48764) [HT Sequencing] Illumina HiSeq 2000 (Mus musculus) (GPL13112) Albert Einstein College of Medicine 2013-07-10 Mus musculus
Mus musculus
6
(0 x 6)
6 by_platform
by_series
20 Genome-wide distribution maps of histone variants H2A.Lap1 and H2A.Z in 30do mouse spermatids [ChIP_seq] (GSE29913) [HT Sequencing] Illumina Genome Analyzer IIx (Mus musculus) (GPL11002) ANU 2011-06-13 Mus musculus
Mus musculus
4
(0 x 4)
4 by_platform
by_series
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