Gene Expression Omnibus (GEO) Overview Version´╝Ü2014-04-12Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(22,139)
  Primates
(288)
  Rodents
(15,364)
  Mammals
(970)
  Vertebrates
(1,364)
  Invertebrates
(4,819)
  Plants
(7,611)
  Bacteria
(3,409)
  Viruses
(59)
  Phages
(8)
  Unclassified
(433)
  All
(56,529)
 
  SAGE NlaIII
(76)
  SAGE RsaI
(1)
  SAGE Sau3A
(10)
  MPSS
(5)
  GeneChip
(7,316)
  Tiling Array
(312)
  cDNA Array
(732)
  Oligo Array
(3,361)
  Bead Array
(1,268)
  Protein Array
(0)
  Antibody
(5)
  RT-PCR
(117)
  HT-Seq
(2,116)
  Other
(45)
  All
(15,364)
 
1   |   2   |   3   |   4   |   5      »      [106]
Title Platform Institute Submission date Species Data size
(probes x samples)
Sample NCBI
FTP
site
Animal Plant  
brain blood connective reproductive muscular digestive liver lung urinary endo/exo-crine embryo adult aerial structure young aerial structure root meristem/growing tissue flower/sexual organ seed/fruit/grain pooled unclassified
1 DNA methylome and transcriptome analysis of normal and HBx transgenic mouse liver (GSE48052) [HT Sequencing] Illumina HiSeq 2500 (Mus musculus) (GPL17021) Yonsei University 2013-06-18 Mus musculus
Mus musculus
4
(0 x 4)
4 by_platform
by_series
2 Analysis of TF binding sites and histone modification in IRF8-induced monocyte differentiation (GSE38824) [HT Sequencing] Illumina Genome Analyzer IIx (Mus musculus) (GPL11002) Yokohama City University 2012-06-20 Mus musculus
Mus musculus
6
(0 x 6)
6 by_platform
by_series
3 IRF8-induced monocyte differentiation (GSE38825) [HT Sequencing] Illumina Genome Analyzer IIx (Mus musculus) (GPL11002) Yokohama City University 2012-06-20 Mus musculus
Mus musculus
6
(0 x 6)
6 by_platform
by_series
4 The Evolution of Lineage-Specific Regulatory Activities in the Human Embryonic Limb (GSE42413) [HT Sequencing] Illumina HiSeq 2000 (Mus musculus) (GPL13112) Yale University School of Medicine 2012-11-20 Mus musculus
Mus musculus
24
(0 x 24)
12 12 by_platform
by_series
5 The genomic landscape of cohesin-associated chromatin interactions (GSE42237) [HT Sequencing] Illumina HiSeq 2000 (Mus musculus) (GPL13112) Yale University School of Medicine 2012-11-13 Mus musculus
Mus musculus
22
(0 x 22)
9 2 11 by_platform
by_series
6 Chromatin state signatures associated with tissue-specific gene expression and enhancer activity in the embryonic limb. (GSE30641) [HT Sequencing] Illumina Genome Analyzer IIx (Mus musculus) (GPL11002) Yale University School of Medicine 2011-07-13 Mus musculus
Mus musculus
14
(0 x 14)
14 by_platform
by_series
7 Chromatin state signatures associated with tissue-specific gene expression and enhancer activity in the embryonic limb. (GSE30641) [HT Sequencing] Illumina HiSeq 2000 (Mus musculus) (GPL13112) Yale University School of Medicine 2011-07-13 Mus musculus
Mus musculus
10
(0 x 10)
10 by_platform
by_series
8 Transcriptome profiling of SOD1 mutant ALS model motor neurons. (GSE38820) [HT Sequencing] Illumina Genome Analyzer IIx (Mus musculus) (GPL11002) Yale University School of Medicine 2012-06-19 Mus musculus
Mus musculus
4
(0 x 4)
4 by_platform
by_series
9 The genomic landscape of cohesin-associated chromatin interactions (GSE42237) [HT Sequencing] Illumina Genome Analyzer IIx (Mus musculus) (GPL11002) Yale University School of Medicine 2012-11-13 Mus musculus
Mus musculus
4
(0 x 4)
4 by_platform
by_series
10 SRF is required for neutrophil migration in response to inflammation (GSE55090) [HT Sequencing] Illumina HiSeq 2000 (Mus musculus) (GPL13112) Yale University School of Medicine 2014-02-18 Mus musculus
Mus musculus
4
(0 x 4)
4 by_platform
by_series
11 Transcriptome analysis of cells of different cycling speed during Yamanaka reprogramming (GSE53074) [HT Sequencing] Illumina HiSeq 2000 (Mus musculus) (GPL13112) Yale University 2013-12-06 Mus musculus
Mus musculus
24
(0 x 24)
8 12 4 by_platform
by_series
12 Transcriptional programs in transient embryonic zones of the cerebral cortex defined by high-resolution mRNA-sequencing (GSE30765) [HT Sequencing] Illumina Genome Analyzer IIx (Mus musculus) (GPL11002) Yale University 2011-07-18 Mus musculus
Mus musculus
12
(0 x 12)
4 8 by_platform
by_series
13 Global Transcriptome Analyses of Mammalian Terminal Erythroid Differentiation (GSE53983) [HT Sequencing] Illumina HiSeq 2000 (Mus musculus) (GPL13112) Yale University 2014-01-10 Mus musculus
Mus musculus
12
(0 x 12)
12 by_platform
by_series
14 Evidence for the independent evolution of "functional progesterone withdrawal" in primates and guinea pigs: a comparative transcriptomic study (GSE47986) [HT Sequencing] Illumina HiSeq 2000 (Cavia porcellus) (GPL17296) Yale University 2013-06-14 Cavia porcellus
Cavia porcellus
10
(0 x 10)
10 by_platform
by_series
15 RNA-seq analysis of the transcriptomes of Piwi-deficient iPSCs (GSE54619) [HT Sequencing] Illumina HiSeq 2000 (Mus musculus) (GPL13112) Yale University 2014-02-03 Mus musculus
Mus musculus
8
(0 x 8)
8 by_platform
by_series
16 Analysis of small RNAs in piRNA pathway mutant mouse testes (GSE20327) [HT Sequencing] Illumina Genome Analyzer II (Mus musculus) (GPL9250) Yale University 2010-02-14 Mus musculus
Mus musculus
6
(0 x 6)
6 by_platform
by_series
17 Transcriptome Analysis of Follicular Helper T cells, Central Memory Precursors, and Terminal Effector Th1 Cells from Wild Type and Stat3fl/fl Cd4cre mice (GSE55596) [HT Sequencing] Illumina HiSeq 2000 (Mus musculus) (GPL13112) Yale University 2014-03-05 Mus musculus
Mus musculus
6
(0 x 6)
6 by_platform
by_series
18 Spontaneous tumor regression is driven by Wnt/Retinoic Acid signaling cross-talk (GSE54098) [HT Sequencing] Illumina HiSeq 2000 (Mus musculus) (GPL13112) Yale University 2014-01-15 Mus musculus
Mus musculus
4
(0 x 4)
4 by_platform
by_series
19 Vascular Endothelial Growth Factor Receptor 3 (VEGFR3) controls hippocampal neural stem cell conversion into progenitor cells (GSE55621) [HT Sequencing] Illumina HiSeq 2500 (Mus musculus) (GPL17021) Yale University 2014-03-05 Mus musculus
Mus musculus
4
(0 x 4)
4 by_platform
by_series
20 Deep sequencing of small RNAs from Mouse brain during aging (GSE34393) [HT Sequencing] Illumina Genome Analyzer (Mus musculus) (GPL9185) YALE UNIVERSITY 2011-12-12 Mus musculus
Mus musculus
2
(0 x 2)
2 by_platform
by_series
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