Gene Expression Omnibus (GEO) Overview Version：2013-04-06Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data Unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(17,356)		   Primates
(665)		   Rodents
(7,771)		   Mammals
(399)		   Vertebrates
(703)		   Invertebrates
(1,567)		   Plants
(3,435)		   Bacteria
(998)		   Viruses
(14)		   Phages
(0)		   Unclassified
(76)		   All
(33,004)		  
  SAGE NlaIII
(1)		   SAGE RsaI
(0)		   SAGE Sau3A
(0)		   MPSS
(0)		   GeneChip
(2,864)		   Tiling Array
(48)		   cDNA Array
(80)		   Oligo Array
(4,067)		   Bead Array
(598)		   Protein Array
(0)		   Antibody
(0)		   RT-PCR
(19)		   HT-Seq
(85)		   Other
(9)		   All
(7,771)		  
  brain
(18)		   blood
(9)		   connective
(3)		   reproductive
(7)		   muscular
(3)		   digestive
(0)		   liver
(1)		   lung
(0)		   urinary
(0)		   endo/exo-crine
(0)		   embryo
(25)		   adult aerial structure
(0)		   young aerial structure
(0)		   root
(0)		   meristem/growing tissue
(0)		   flower/sexual organ
(0)		   seed/fruit/grain
(0)		   pooled
(13)		   unclassified
(6)		   all
(85)		  
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Sample ID Title Number of Data Institute Submission date Platform Sample type Species Organ class Reasoning of the classification
Keywords used for the classification are shown with bold font.
1 GSM400969 Mili-Tdrd1 KO associated 1,606,988 EMBL Grenoble Outstation 2009-05-08 [HT Sequencing] Illumina Genome Analyzer (Mus musculus) (GPL9185) SRA Mus musculus
Mus musculus		 testis Testes
2 GSM416611 NIH3T3 759,837 Whitehead Institute 2009-06-11 [HT Sequencing] Illumina Genome Analyzer (Mus musculus) (GPL9185) SRA Mus musculus
Mus musculus		 unclassified source_name:cell line title:NIH3T3 description:none
3 GSM416732 MEF 549,185 Whitehead Institute 2009-06-12 [HT Sequencing] Illumina Genome Analyzer (Mus musculus) (GPL9185) SRA Mus musculus
Mus musculus		 unclassified source_name:cell line title:MEF description:none
4 GSM400967 Tdrd1-associated 503,854 EMBL Grenoble Outstation 2009-05-08 [HT Sequencing] Illumina Genome Analyzer (Mus musculus) (GPL9185) SRA Mus musculus
Mus musculus		 testis Testes
5 GSM400968 Mili-wt-associated 388,863 EMBL Grenoble Outstation 2009-05-08 [HT Sequencing] Illumina Genome Analyzer (Mus musculus) (GPL9185) SRA Mus musculus
Mus musculus		 testis Testes
6 GSM402710 cells, acutely infected, rep1 2,219 MIT 2009-05-13 [HT Sequencing] 454 GS FLX (Mus musculus) (GPL9273) SRA Mus musculus
Mus musculus		 lymphnode lymphoma cells
7 GSM402711 cells, in vitro, rep1 2,219 MIT 2009-05-13 [HT Sequencing] 454 GS FLX (Mus musculus) (GPL9273) SRA Mus musculus
Mus musculus		 lymphnode lymphoma cells
8 GSM402712 cells, in vitro, rep2 2,219 MIT 2009-05-13 [HT Sequencing] 454 GS FLX (Mus musculus) (GPL9273) SRA Mus musculus
Mus musculus		 lymphnode lymphoma cells
9 GSM402713 cells, in vitro, rep3 2,219 MIT 2009-05-13 [HT Sequencing] 454 GS FLX (Mus musculus) (GPL9273) SRA Mus musculus
Mus musculus		 lymphnode lymphoma cells
10 GSM402714 cells, tumor, rep1 2,219 MIT 2009-05-13 [HT Sequencing] 454 GS FLX (Mus musculus) (GPL9273) SRA Mus musculus
Mus musculus		 lymphnode lymphoma cells
11 GSM402715 cells, tumor, rep2 2,219 MIT 2009-05-13 [HT Sequencing] 454 GS FLX (Mus musculus) (GPL9273) SRA Mus musculus
Mus musculus		 lymphnode lymphoma cells
12 GSM402716 cells, tumor, rep3 2,219 MIT 2009-05-13 [HT Sequencing] 454 GS FLX (Mus musculus) (GPL9273) SRA Mus musculus
Mus musculus		 lymphnode lymphoma cells
13 GSM410816 smallRNA_rat_brain_SREK_rep2 297 Hubrecht Institute 2009-06-01 [HT Sequencing] AB SOLiD System 2.0 (Rattus norvegicus) (GPL9413) SRA Rattus norvegicus
Rattus norvegicus		 cerebrum rat brain
14 GSM410815 smallRNA_rat_brain_SREK_rep1 288 Hubrecht Institute 2009-06-01 [HT Sequencing] AB SOLiD System 2.0 (Rattus norvegicus) (GPL9413) SRA Rattus norvegicus
Rattus norvegicus		 cerebrum rat brain
15 GSM410820 smallRNA_rat_brain_polyA_rep2 288 Hubrecht Institute 2009-06-01 [HT Sequencing] AB SOLiD System 2.0 (Rattus norvegicus) (GPL9413) SRA Rattus norvegicus
Rattus norvegicus		 cerebrum rat brain
16 GSM410821 small_RNA_rat_spleen 287 Hubrecht Institute 2009-06-01 [HT Sequencing] AB SOLiD System 2.0 (Rattus norvegicus) (GPL9413) SRA Rattus norvegicus
Rattus norvegicus		 spleen rat spleen
17 GSM410822 small_RNA_rat_liver 280 Hubrecht Institute 2009-06-01 [HT Sequencing] AB SOLiD System 2.0 (Rattus norvegicus) (GPL9413) SRA Rattus norvegicus
Rattus norvegicus		 liver/hepato rat liver
18 GSM410810 SREK_miRNA_profiling 2 278 Hubrecht Institute 2009-06-01 [HT Sequencing] 454 GS FLX (Rattus norvegicus) (GPL9412) SRA Rattus norvegicus
Rattus norvegicus		 cerebrum rat brain
19 GSM410818 smallRNA_rat_brain_modban_rep2 277 Hubrecht Institute 2009-06-01 [HT Sequencing] AB SOLiD System 2.0 (Rattus norvegicus) (GPL9413) SRA Rattus norvegicus
Rattus norvegicus		 cerebrum rat brain
20 GSM410809 SREK_miRNA_profiling 1 271 Hubrecht Institute 2009-06-01 [HT Sequencing] 454 GS FLX (Rattus norvegicus) (GPL9412) SRA Rattus norvegicus
Rattus norvegicus		 cerebrum rat brain
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