Gene Expression Omnibus (GEO) Overview Version：2013-04-06Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.

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Data Unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(9,308)		   Primates
(0)		   Rodents
(3,359)		   Mammals
(0)		   Vertebrates
(0)		   Invertebrates
(0)		   Plants
(0)		   Bacteria
(0)		   Viruses
(0)		   Phages
(0)		   Unclassified
(0)		   All
(17,366)		  
  SAGE NlaIII
(0)		   SAGE RsaI
(0)		   SAGE Sau3A
(0)		   MPSS
(0)		   GeneChip
(1,712)		   Tiling Array
(0)		   cDNA Array
(70)		   Oligo Array
(1,244)		   Bead Array
(290)		   Protein Array
(0)		   Antibody
(0)		   RT-PCR
(15)		   HT-Seq
(28)		   Other
(0)		   All
(3,359)		  
  brain
(6)		   blood
(8)		   connective
(0)		   reproductive
(0)		   muscular
(0)		   digestive
(0)		   liver
(0)		   lung
(0)		   urinary
(0)		   endo/exo-crine
(0)		   embryo
(6)		   adult aerial structure
(0)		   young aerial structure
(0)		   root
(0)		   meristem/growing tissue
(0)		   flower/sexual organ
(0)		   seed/fruit/grain
(0)		   pooled
(4)		   unclassified
(4)		   all
(28)		  
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Sample ID Title Number of Data Institute Submission date Platform Sample type Species Organ class Reasoning of the classification
Keywords used for the classification are shown with bold font.
1 GSM416611 NIH3T3 759,837 Whitehead Institute 2009-06-11 [HT Sequencing] Illumina Genome Analyzer (Mus musculus) (GPL9185) SRA Mus musculus
Mus musculus		 unclassified source_name:cell line title:NIH3T3 description:none
2 GSM416732 MEF 549,185 Whitehead Institute 2009-06-12 [HT Sequencing] Illumina Genome Analyzer (Mus musculus) (GPL9185) SRA Mus musculus
Mus musculus		 unclassified source_name:cell line title:MEF description:none
3 GSM402710 cells, acutely infected, rep1 2,219 MIT 2009-05-13 [HT Sequencing] 454 GS FLX (Mus musculus) (GPL9273) SRA Mus musculus
Mus musculus		 lymphnode lymphoma cells
4 GSM402711 cells, in vitro, rep1 2,219 MIT 2009-05-13 [HT Sequencing] 454 GS FLX (Mus musculus) (GPL9273) SRA Mus musculus
Mus musculus		 lymphnode lymphoma cells
5 GSM402712 cells, in vitro, rep2 2,219 MIT 2009-05-13 [HT Sequencing] 454 GS FLX (Mus musculus) (GPL9273) SRA Mus musculus
Mus musculus		 lymphnode lymphoma cells
6 GSM402713 cells, in vitro, rep3 2,219 MIT 2009-05-13 [HT Sequencing] 454 GS FLX (Mus musculus) (GPL9273) SRA Mus musculus
Mus musculus		 lymphnode lymphoma cells
7 GSM402714 cells, tumor, rep1 2,219 MIT 2009-05-13 [HT Sequencing] 454 GS FLX (Mus musculus) (GPL9273) SRA Mus musculus
Mus musculus		 lymphnode lymphoma cells
8 GSM402715 cells, tumor, rep2 2,219 MIT 2009-05-13 [HT Sequencing] 454 GS FLX (Mus musculus) (GPL9273) SRA Mus musculus
Mus musculus		 lymphnode lymphoma cells
9 GSM402716 cells, tumor, rep3 2,219 MIT 2009-05-13 [HT Sequencing] 454 GS FLX (Mus musculus) (GPL9273) SRA Mus musculus
Mus musculus		 lymphnode lymphoma cells
10 GSM399090 WT MEF uH2A 0 National Institutes of Health 2009-04-29 [HT Sequencing] Illumina Genome Analyzer (Mus musculus) (GPL9185) SRA Mus musculus
Mus musculus		 unclassified source_name:Bmi1 WT C57BL/6 MEF cells title:WT MEF uH2A description:Chromatin IP with anti-uH2A E6C5
11 GSM399091 Bmi1 KO MEF uH2A 0 National Institutes of Health 2009-04-29 [HT Sequencing] Illumina Genome Analyzer (Mus musculus) (GPL9185) SRA Mus musculus
Mus musculus		 unclassified source_name:Bmi1 KO C57BL/6 MEF cells title:Bmi1 KO MEF uH2A description:Chromatin IP with anti-uH2A E6C5
12 GSM417015 GATA-1_ChIPSeq 0 MIT 2009-06-12 [HT Sequencing] Illumina Genome Analyzer (Mus musculus) (GPL9185) SRA Mus musculus
Mus musculus		 peripheral blood MEL86 erythroid cell line expressing metabolically biotinylated GATA-1 (MEL Bio-GATA-1)
13 GSM419049 macrophage_BCL6_ChIPSeq 0 Salk Institute 2009-06-19 [HT Sequencing] Illumina Genome Analyzer II (Mus musculus) (GPL9250) SRA Mus musculus
Mus musculus		 pooled primary bone marrow-derived macrophages
14 GSM419050 macrophage_IgG_ChIPSeq 0 Salk Institute 2009-06-19 [HT Sequencing] Illumina Genome Analyzer II (Mus musculus) (GPL9250) SRA Mus musculus
Mus musculus		 pooled primary bone marrow-derived macrophages
15 GSM419051 macrophage_input_DNA 0 Salk Institute 2009-06-19 [HT Sequencing] Illumina Genome Analyzer II (Mus musculus) (GPL9250) SRA Mus musculus
Mus musculus		 pooled primary bone marrow-derived macrophages
16 GSM419052 macrophage_Pol_II_ChIPSeq 0 Salk Institute 2009-06-19 [HT Sequencing] Illumina Genome Analyzer II (Mus musculus) (GPL9250) SRA Mus musculus
Mus musculus		 pooled primary bone marrow-derived macrophages
17 GSM423355 ES_H33_HA_antiHA_xChIPSeq 0 The Rockefeller University 2009-06-30 [HT Sequencing] Illumina Genome Analyzer II (Mus musculus) (GPL9250) SRA Mus musculus
Mus musculus		 embryo Embryonic stem cells
18 GSM423356 ES_H33_HA_H3K36me3_xChIPSeq 0 The Rockefeller University 2009-06-30 [HT Sequencing] Illumina Genome Analyzer II (Mus musculus) (GPL9250) SRA Mus musculus
Mus musculus		 embryo Embryonic stem cells
19 GSM423357 ES_H33_HA_H3K4me1_xChIPSeq 0 The Rockefeller University 2009-06-30 [HT Sequencing] Illumina Genome Analyzer II (Mus musculus) (GPL9250) SRA Mus musculus
Mus musculus		 embryo Embryonic stem cells
20 GSM423358 ES_H33_HA_RNAPII_CTD4H8_xChIPSeq 0 The Rockefeller University 2009-06-30 [HT Sequencing] Illumina Genome Analyzer II (Mus musculus) (GPL9250) SRA Mus musculus
Mus musculus		 embryo Embryonic stem cells
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