Gene Expression Omnibus (GEO) Overview Version´╝Ü2014-04-12Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.

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RSS
Data Unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(615,734)
  Primates
(5,814)
  Rodents
(225,055)
  Mammals
(20,968)
  Vertebrates
(22,581)
  Invertebrates
(46,584)
  Plants
(107,706)
  Bacteria
(45,091)
  Viruses
(1,432)
  Phages
(112)
  Unclassified
(6,986)
  All
(1,101,311)
 
  SAGE NlaIII
(718)
  SAGE RsaI
(3)
  SAGE Sau3A
(37)
  MPSS
(100)
  GeneChip
(108,928)
  Tiling Array
(2,164)
  cDNA Array
(11,311)
  Oligo Array
(0)
  Bead Array
(0)
  Protein Array
(0)
  Antibody
(28)
  RT-PCR
(1,166)
  HT-Seq
(0)
  Other
(968)
  All
(225,055)
 
  brain
(0)
  blood
(0)
  connective
(0)
  reproductive
(0)
  muscular
(0)
  digestive
(0)
  liver
(0)
  lung
(0)
  urinary
(0)
  endo/exo-crine
(0)
  embryo
(0)
  adult aerial structure
(0)
  young aerial structure
(0)
  root
(0)
  meristem/growing tissue
(0)
  flower/sexual organ
(0)
  seed/fruit/grain
(0)
  pooled
(0)
  unclassified
(5,009)
  all
(0)
 
Sample ID Title Number of Data Institute Submission date Platform Sample type Species Organ class Reasoning of the classification
Keywords used for the classification are shown with bold font.
1 GSM999807 BMDC 6hr LPS Input 0 Genentech Inc. 2012-09-10 [HT Sequencing] Illumina HiSeq 2000 (Mus musculus) (GPL13112) SRA Mus musculus
Mus musculus
bone marrow Bone marrow derived dendritic cells stimulated with LPS
2 GSM999806 Th0 42hr Input 0 Genentech Inc. 2012-09-10 [HT Sequencing] Illumina Genome Analyzer IIx (Mus musculus) (GPL11002) SRA Mus musculus
Mus musculus
unclassified source_name:Th0 polarized cells title:Th0 42hr Input description:Sample 7
3 GSM999805 Th17 42hr Input 0 Genentech Inc. 2012-09-10 [HT Sequencing] Illumina Genome Analyzer IIx (Mus musculus) (GPL11002) SRA Mus musculus
Mus musculus
unclassified source_name:Th17 polarized cells title:Th17 42hr Input description:Sample 6
4 GSM999804 BMDC 6hr LPS IRF4 0 Genentech Inc. 2012-09-10 [HT Sequencing] Illumina HiSeq 2000 (Mus musculus) (GPL13112) SRA Mus musculus
Mus musculus
bone marrow Bone marrow derived dendritic cells stimulated with LPS
5 GSM999803 Th0 42hr IRF4 0 Genentech Inc. 2012-09-10 [HT Sequencing] Illumina Genome Analyzer IIx (Mus musculus) (GPL11002) SRA Mus musculus
Mus musculus
unclassified source_name:Th0 polarized cells title:Th0 42hr IRF4 description:Sample 4
6 GSM999802 Th2 42hr IRF4 0 Genentech Inc. 2012-09-10 [HT Sequencing] Illumina Genome Analyzer IIx (Mus musculus) (GPL11002) SRA Mus musculus
Mus musculus
thymus Th2 polarized cells
7 GSM999801 Th17 42hr BATF 0 Genentech Inc. 2012-09-10 [HT Sequencing] Illumina Genome Analyzer IIx (Mus musculus) (GPL11002) SRA Mus musculus
Mus musculus
unclassified source_name:Th17 polarized cells title:Th17 42hr BATF description:Sample 2
8 GSM999800 Th17 42hr IRF4 0 Genentech Inc. 2012-09-10 [HT Sequencing] Illumina Genome Analyzer IIx (Mus musculus) (GPL11002) SRA Mus musculus
Mus musculus
unclassified source_name:Th17 polarized cells title:Th17 42hr IRF4 description:Sample 1
9 GSM999791 Input_CHIP-seq 0 Genentech Inc. 2012-09-10 [HT Sequencing] Illumina Genome Analyzer II (Mus musculus) (GPL9250) SRA Mus musculus
Mus musculus
bone marrow bone marrow progenitors
10 GSM999790 OGT1_CHIP-seq 0 Genentech Inc. 2012-09-10 [HT Sequencing] Illumina Genome Analyzer II (Mus musculus) (GPL9250) SRA Mus musculus
Mus musculus
bone marrow bone marrow progenitors
11 GSM999789 HCF1_CHIP-seq 0 Genentech Inc. 2012-09-10 [HT Sequencing] Illumina Genome Analyzer II (Mus musculus) (GPL9250) SRA Mus musculus
Mus musculus
bone marrow bone marrow progenitors
12 GSM999788 BAP1 flag_CHIP-seq 0 Genentech Inc. 2012-09-10 [HT Sequencing] Illumina Genome Analyzer II (Mus musculus) (GPL9250) SRA Mus musculus
Mus musculus
bone marrow bone marrow progenitors
13 GSM999244 Mouse P6 Sertoli Cells 0 University of Nevada, Reno 2012-09-07 [HT Sequencing] 454 GS 20 (Mus musculus) (GPL9522) SRA Mus musculus
Mus musculus
testis Sertoli Cells
14 GSM999212 NOD.Rag1KOWK6.5_RNA-seq 0 California Institute of Technology 2012-09-07 [HT Sequencing] Illumina Genome Analyzer II (Mus musculus) (GPL9250) SRA Mus musculus
Mus musculus
unclassified source_name:NOD.Rag1KO WK6.5 title:NOD.Rag1KOWK6.5_RNA-seq
15 GSM999211 NOD.Rag1KOWK4_RNA-Seq 0 California Institute of Technology 2012-09-07 [HT Sequencing] Illumina Genome Analyzer II (Mus musculus) (GPL9250) SRA Mus musculus
Mus musculus
unclassified source_name:NOD.Rag1KO WK4 title:NOD.Rag1KOWK4_RNA-Seq
16 GSM999210 B6.Rag1KOWK7_RNA-Seq 0 California Institute of Technology 2012-09-07 [HT Sequencing] Illumina Genome Analyzer II (Mus musculus) (GPL9250) SRA Mus musculus
Mus musculus
unclassified source_name:B6.Rag1KO WK7 title:B6.Rag1KOWK7_RNA-Seq
17 GSM999209 B6.Rag1KOWK4_RNA-Seq 0 California Institute of Technology 2012-09-07 [HT Sequencing] Illumina Genome Analyzer II (Mus musculus) (GPL9250) SRA Mus musculus
Mus musculus
unclassified source_name:B6.Rag1KO WK4 title:B6.Rag1KOWK4_RNA-Seq
18 GSM999189 CD4 Cbfb ChIP 0 Memorial Sloan-Kettering Cancer Center 2012-09-07 [HT Sequencing] Illumina HiSeq 2000 (Mus musculus) (GPL13112) SRA Mus musculus
Mus musculus
lymphnode CD4 Cbfb ChIP
19 GSM999188 Treg Cbfb ChIP 0 Memorial Sloan-Kettering Cancer Center 2012-09-07 [HT Sequencing] Illumina HiSeq 2000 (Mus musculus) (GPL13112) SRA Mus musculus
Mus musculus
unclassified source_name:Treg Cbfb ChIP title:Treg Cbfb ChIP description:Treg Cbfb ChIP
20 GSM999187 CD4 Ets1 ChIP 0 Memorial Sloan-Kettering Cancer Center 2012-09-07 [HT Sequencing] Illumina HiSeq 2000 (Mus musculus) (GPL13112) SRA Mus musculus
Mus musculus
lymphnode CD4 Ets1 ChIP