Gene Expression Omnibus (GEO) Overview Version´╝Ü2014-04-12Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data Unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(10,907)
  Primates
(161)
  Rodents
(4,382)
  Mammals
(440)
  Vertebrates
(308)
  Invertebrates
(851)
  Plants
(4,190)
  Bacteria
(913)
  Viruses
(22)
  Phages
(0)
  Unclassified
(195)
  All
(22,372)
 
  SAGE NlaIII
(5)
  SAGE RsaI
(0)
  SAGE Sau3A
(0)
  MPSS
(0)
  GeneChip
(2,369)
  Tiling Array
(97)
  cDNA Array
(192)
  Oligo Array
(1,538)
  Bead Array
(130)
  Protein Array
(0)
  Antibody
(0)
  RT-PCR
(0)
  HT-Seq
(51)
  Other
(0)
  All
(4,382)
 
  brain
(12)
  blood
(6)
  connective
(4)
  reproductive
(0)
  muscular
(0)
  digestive
(0)
  liver
(1)
  lung
(1)
  urinary
(0)
  endo/exo-crine
(0)
  embryo
(20)
  adult aerial structure
(0)
  young aerial structure
(0)
  root
(0)
  meristem/growing tissue
(0)
  flower/sexual organ
(0)
  seed/fruit/grain
(0)
  pooled
(0)
  unclassified
(7)
  all
(51)
 
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Sample ID Title Number of Data Institute Submission date Platform Sample type Species Organ class Reasoning of the classification
Keywords used for the classification are shown with bold font.
1 GSM281692 NP_H3K4me2_ChIPSeq 0 Broad Institute 2008-04-14 [HT Sequencing] Illumina Genome Analyzer (Mus musculus) (GPL9185) SRA Mus musculus
Mus musculus
cerebrum Neural progenitor cells (ES-derived, passages 15-18)
2 GSM281693 NP_H3K4me1_ChIPSeq 0 Broad Institute 2008-04-14 [HT Sequencing] Illumina Genome Analyzer (Mus musculus) (GPL9185) SRA Mus musculus
Mus musculus
cerebrum Neural progenitor cells (ES-derived, passages 15-18)
3 GSM281694 ES_H3K4me2_ChIPSeq 0 Broad Institute 2008-04-14 [HT Sequencing] Illumina Genome Analyzer (Mus musculus) (GPL9185) SRA Mus musculus
Mus musculus
embryo Embyonic stem cells (V6.5)
4 GSM281695 ES_H3K4me1_ChIPSeq 0 Broad Institute 2008-04-14 [HT Sequencing] Illumina Genome Analyzer (Mus musculus) (GPL9185) SRA Mus musculus
Mus musculus
embryo Embyonic stem cells (V6.5)
5 GSM281696 Brain_H3K4me3_ChIPSeq 0 Broad Institute 2008-04-14 [HT Sequencing] Illumina Genome Analyzer (Mus musculus) (GPL9185) SRA Mus musculus
Mus musculus
cerebrum Whole brain
6 GSM281697 Brain_H3K4me2_ChIPSeq 0 Broad Institute 2008-04-14 [HT Sequencing] Illumina Genome Analyzer (Mus musculus) (GPL9185) SRA Mus musculus
Mus musculus
cerebrum Whole brain
7 GSM282692 Brain_H3K27me3_ChIPSeq 0 Broad Institute 2008-04-20 [HT Sequencing] Illumina Genome Analyzer (Mus musculus) (GPL9185) SRA Mus musculus
Mus musculus
cerebrum Whole brain
8 GSM288345 ES_Nanog 0 Genome Institute of Singapore 2008-05-13 [HT Sequencing] Illumina Genome Analyzer (Mus musculus) (GPL9185) SRA Mus musculus
Mus musculus
embryo Embryonic stem cells
9 GSM288346 ES_Oct4 0 Genome Institute of Singapore 2008-05-13 [HT Sequencing] Illumina Genome Analyzer (Mus musculus) (GPL9185) SRA Mus musculus
Mus musculus
embryo Embryonic stem cells
10 GSM288347 ES_Sox2 0 Genome Institute of Singapore 2008-05-13 [HT Sequencing] Illumina Genome Analyzer (Mus musculus) (GPL9185) SRA Mus musculus
Mus musculus
embryo Embryonic stem cells
11 GSM288348 ES_Smad1 0 Genome Institute of Singapore 2008-05-13 [HT Sequencing] Illumina Genome Analyzer (Mus musculus) (GPL9185) SRA Mus musculus
Mus musculus
embryo Embryonic stem cells
12 GSM288349 ES_E2f1 0 Genome Institute of Singapore 2008-05-13 [HT Sequencing] Illumina Genome Analyzer (Mus musculus) (GPL9185) SRA Mus musculus
Mus musculus
embryo Embryonic stem cells
13 GSM288350 ES_Tcfcp2I1 0 Genome Institute of Singapore 2008-05-13 [HT Sequencing] Illumina Genome Analyzer (Mus musculus) (GPL9185) SRA Mus musculus
Mus musculus
embryo Embryonic stem cells
14 GSM288351 ES_CTCF 0 Genome Institute of Singapore 2008-05-13 [HT Sequencing] Illumina Genome Analyzer (Mus musculus) (GPL9185) SRA Mus musculus
Mus musculus
embryo Embryonic stem cells
15 GSM288352 ES_Zfx 0 Genome Institute of Singapore 2008-05-13 [HT Sequencing] Illumina Genome Analyzer (Mus musculus) (GPL9185) SRA Mus musculus
Mus musculus
embryo Embryonic stem cells
16 GSM288353 ES_STAT3 0 Genome Institute of Singapore 2008-05-13 [HT Sequencing] Illumina Genome Analyzer (Mus musculus) (GPL9185) SRA Mus musculus
Mus musculus
embryo Embryonic stem cells
17 GSM288354 ES_Klf4 0 Genome Institute of Singapore 2008-05-13 [HT Sequencing] Illumina Genome Analyzer (Mus musculus) (GPL9185) SRA Mus musculus
Mus musculus
embryo Embryonic stem cells
18 GSM288355 ES_Esrrb 0 Genome Institute of Singapore 2008-05-13 [HT Sequencing] Illumina Genome Analyzer (Mus musculus) (GPL9185) SRA Mus musculus
Mus musculus
embryo Embryonic stem cells
19 GSM288356 ES_c-Myc 0 Genome Institute of Singapore 2008-05-13 [HT Sequencing] Illumina Genome Analyzer (Mus musculus) (GPL9185) SRA Mus musculus
Mus musculus
embryo Embryonic stem cells
20 GSM288357 ES_n-Myc 0 Genome Institute of Singapore 2008-05-13 [HT Sequencing] Illumina Genome Analyzer (Mus musculus) (GPL9185) SRA Mus musculus
Mus musculus
embryo Embryonic stem cells
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