Gene Expression Omnibus (GEO) Overview Version:2013-04-06Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.

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RSS
Data Unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(502,421)
  Primates
(4,928)
  Rodents
(181,106)
  Mammals
(16,260)
  Vertebrates
(18,263)
  Invertebrates
(37,338)
  Plants
(91,454)
  Bacteria
(39,082)
  Viruses
(1,266)
  Phages
(101)
  Unclassified
(5,242)
  All
(898,944)
 
  SAGE NlaIII
(718)
  SAGE RsaI
(3)
  SAGE Sau3A
(37)
  MPSS
(100)
  GeneChip
(89,973)
  Tiling Array
(2,000)
  cDNA Array
(11,116)
  Oligo Array
(53,181)
  Bead Array
(13,914)
  Protein Array
(0)
  Antibody
(22)
  RT-PCR
(885)
  HT-Seq
(8,762)
  Other
(395)
  All
(181,106)
 
  brain
(0)
  blood
(0)
  connective
(0)
  reproductive
(0)
  muscular
(0)
  digestive
(0)
  liver
(0)
  lung
(0)
  urinary
(0)
  endo/exo-crine
(0)
  embryo
(0)
  adult aerial structure
(0)
  young aerial structure
(0)
  root
(0)
  meristem/growing tissue
(0)
  flower/sexual organ
(0)
  seed/fruit/grain
(0)
  pooled
(0)
  unclassified
(2,569)
  all
(8,762)
 
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Sample ID Title Number of Data Institute Submission date Platform Sample type Species Organ class Reasoning of the classification
Keywords used for the classification are shown with bold font.
1 GSM1031977 Tot2, MSCV-IRF8, Day3, anti-PU.1 0 Yokohama City University 2012-11-06 [HT Sequencing] Illumina Genome Analyzer IIx (Mus musculus) (GPL11002) SRA Mus musculus
Mus musculus
unclassified source_name:Tot2 cells, MSCV-IRF8 transduced, Day3 title:Tot2, MSCV-IRF8, Day3, anti-PU.1
2 GSM950321 Tot2, MSCV, Day3, input DNA 0 Yokohama City University 2012-06-20 [HT Sequencing] Illumina Genome Analyzer IIx (Mus musculus) (GPL11002) SRA Mus musculus
Mus musculus
unclassified source_name:Tot2 cells, MSCV transuced, Day3 title:Tot2, MSCV, Day3, input DNA
3 GSM950322 Tot2, MSCV, Day3, anti-H3K4me1 0 Yokohama City University 2012-06-20 [HT Sequencing] Illumina Genome Analyzer IIx (Mus musculus) (GPL11002) SRA Mus musculus
Mus musculus
unclassified source_name:Tot2 cells, MSCV transuced, Day3 title:Tot2, MSCV, Day3, anti-H3K4me1
4 GSM950323 Tot2, MSCV-IRF8, Day3, input DNA 0 Yokohama City University 2012-06-20 [HT Sequencing] Illumina Genome Analyzer IIx (Mus musculus) (GPL11002) SRA Mus musculus
Mus musculus
unclassified source_name:Tot2 cells, MSCV-IRF8 transuced, Day3 title:Tot2, MSCV-IRF8, Day3, input DNA
5 GSM950324 Tot2, MSCV-IRF8, Day3, anti-H3K4me1 0 Yokohama City University 2012-06-20 [HT Sequencing] Illumina Genome Analyzer IIx (Mus musculus) (GPL11002) SRA Mus musculus
Mus musculus
unclassified source_name:Tot2 cells, MSCV-IRF8 transuced, Day3 title:Tot2, MSCV-IRF8, Day3, anti-H3K4me1
6 GSM950325 Tot2, MSCV-IRF8, Day3, anti-IRF8 0 Yokohama City University 2012-06-20 [HT Sequencing] Illumina Genome Analyzer IIx (Mus musculus) (GPL11002) SRA Mus musculus
Mus musculus
unclassified source_name:Tot2 cells, MSCV-IRF8 transuced, Day3 title:Tot2, MSCV-IRF8, Day3, anti-IRF8
7 GSM759858 E10.5_forelimb_ChIP_input_rep1 0 Yale University School of Medicine 2011-07-13 [HT Sequencing] Illumina Genome Analyzer IIx (Mus musculus) (GPL11002) SRA Mus musculus
Mus musculus
embryo embryonic forelimb bud, ChIP input
8 GSM759859 E10.5_forelimb_ChIP_input_rep2 0 Yale University School of Medicine 2011-07-13 [HT Sequencing] Illumina Genome Analyzer IIx (Mus musculus) (GPL11002) SRA Mus musculus
Mus musculus
embryo embryonic forelimb bud, ChIP input
9 GSM759860 E10.5_forelimb_ChIP_input_rep3 0 Yale University School of Medicine 2011-07-13 [HT Sequencing] Illumina Genome Analyzer IIx (Mus musculus) (GPL11002) SRA Mus musculus
Mus musculus
embryo embryonic forelimb bud, ChIP input
10 GSM759861 E10.5_forelimb_ChIP_input_rep4_index4 0 Yale University School of Medicine 2011-07-13 [HT Sequencing] Illumina HiSeq 2000 (Mus musculus) (GPL13112) SRA Mus musculus
Mus musculus
embryo embryonic forelimb bud, ChIP input
11 GSM759864 E10.5_forelimb_H3K27ac_ChIP_seq_rep1_index_6 0 Yale University School of Medicine 2011-07-13 [HT Sequencing] Illumina HiSeq 2000 (Mus musculus) (GPL13112) SRA Mus musculus
Mus musculus
embryo embryonic forelimb bud, H3K27ac ChIP
12 GSM759865 E10.5_forelimb_H3K27ac_ChIP_seq_rep2_index12 0 Yale University School of Medicine 2011-07-13 [HT Sequencing] Illumina HiSeq 2000 (Mus musculus) (GPL13112) SRA Mus musculus
Mus musculus
embryo embryonic forelimb bud, H3K27ac ChIP
13 GSM759866 E10.5_forelimb_H3K27me3_ChIP_seq_rep1 0 Yale University School of Medicine 2011-07-13 [HT Sequencing] Illumina Genome Analyzer IIx (Mus musculus) (GPL11002) SRA Mus musculus
Mus musculus
embryo embryonic forelimb bud, H3K27me3 ChIP
14 GSM759867 E10.5_forelimb_H3K27me3_ChIP_seq_rep2 0 Yale University School of Medicine 2011-07-13 [HT Sequencing] Illumina Genome Analyzer IIx (Mus musculus) (GPL11002) SRA Mus musculus
Mus musculus
embryo embryonic forelimb bud, H3K27me3 ChIP
15 GSM759868 E10.5_forelimb_mRNA_seq_rep1 0 Yale University School of Medicine 2011-07-13 [HT Sequencing] Illumina Genome Analyzer IIx (Mus musculus) (GPL11002) SRA Mus musculus
Mus musculus
embryo embryonic forelimb bud, RNA-Seq
16 GSM759869 E10.5_forelimb_mRNA_seq_rep2 0 Yale University School of Medicine 2011-07-13 [HT Sequencing] Illumina Genome Analyzer IIx (Mus musculus) (GPL11002) SRA Mus musculus
Mus musculus
embryo embryonic forelimb bud, RNA-Seq
17 GSM759870 E10.5_hindlimb_ChIP_input_rep1 0 Yale University School of Medicine 2011-07-13 [HT Sequencing] Illumina Genome Analyzer IIx (Mus musculus) (GPL11002) SRA Mus musculus
Mus musculus
embryo embryonic hindlimb bud, ChIP input
18 GSM759871 E10.5_hindlimb_ChIP_input_rep2 0 Yale University School of Medicine 2011-07-13 [HT Sequencing] Illumina Genome Analyzer IIx (Mus musculus) (GPL11002) SRA Mus musculus
Mus musculus
embryo embryonic hindlimb bud, ChIP input
19 GSM759872 E10.5_hindlimb_ChIP_input_rep3 0 Yale University School of Medicine 2011-07-13 [HT Sequencing] Illumina Genome Analyzer IIx (Mus musculus) (GPL11002) SRA Mus musculus
Mus musculus
embryo embryonic hindlimb bud, ChIP input
20 GSM759873 E10.5_hindlimb_ChIP_input_rep4_index4 0 Yale University School of Medicine 2011-07-13 [HT Sequencing] Illumina HiSeq 2000 (Mus musculus) (GPL13112) SRA Mus musculus
Mus musculus
embryo embryonic hindlimb bud, ChIP input
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