Gene Expression Omnibus (GEO) Overview Version:2014-04-12Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.

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Data Unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(3,985)
  Primates
(80)
  Rodents
(1,907)
  Mammals
(359)
  Vertebrates
(450)
  Invertebrates
(1,139)
  Plants
(2,490)
  Bacteria
(1,901)
  Viruses
(90)
  Phages
(11)
  Unclassified
(542)
  All
(13,032)
 
  SAGE NlaIII
(6)
  SAGE RsaI
(1)
  SAGE Sau3A
(2)
  MPSS
(4)
  GeneChip
(0)
  Tiling Array
(0)
  cDNA Array
(0)
  Oligo Array
(928)
  Bead Array
(63)
  Protein Array
(0)
  Antibody
(4)
  RT-PCR
(68)
  HT-Seq
(0)
  Other
(20)
  All
(1,907)
 
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Platform ID Title Number of the probes Institute Submission date Manufacturer Species Platform class Reasoning of the classification
Keywords used for the classification are shown with bold font.
1 GPL18466 3D-Gene Mouse miRNA V19_1.0.0 1,265 Toray Industries,Inc. 2014-03-25 TORAY Industries, Inc. Mus musculus
Mus musculus
Oligo Array spotted oligonucleotide, 3D-Gene Mouse miRNA V19_1.0.0,
2 GPL18431 MRA-1002_miRMouse_17 1,144 CCMB 2014-03-17 LC Sciences Mus musculus
Mus musculus
Oligo Array in situ oligonucleotide, MRA-1002_miRMouse_17,
3 GPL18406 Agilent-026986 Custom Whole Genome Mouse 8x60k designed by Genotypic Technology Pvt. Ltd. Feature Number 62,976 Thrombosis Research Institute 2014-03-11 www.chem.agilent.com Mus musculus
Mus musculus
Oligo Array in situ oligonucleotide, Agilent-026986 Custom Whole Genome Mouse 8x60k designed by Genotypic Technology Pvt. Ltd. Feature Number,
4 GPL18398 Exiqon Mouse miRCURY 6th generation LNA microRNA array [Condensed ProbeID Version] 1,175 NCBI/NLM/NIH 2014-03-10 Exiqon, Vedbaek, Denmark Mus musculus
Mus musculus
Oligo Array spotted oligonucleotide, Exiqon Mouse miRCURY 6th generation LNA microRNA array [Condensed ProbeID Version], miRCURY 6th generation LNAâ„¢ microRNA array
5 GPL18360 NimbleGen Mouse DNA Methylation 385K CpG Island Plus RefSeq Promoter Array [2007-02-27_MM8_CpG_Island_Pro] 373,683 Imperial College 2014-02-28 NimbleGen Mus musculus
Mus musculus
Oligo Array in situ oligonucleotide, NimbleGen Mouse DNA Methylation 385K CpG Island Plus RefSeq Promoter Array [2007-02-27_MM8_CpG_Island_Pro], Build MM8 Design 5313
6 GPL18312 Phalanx Mouse miRNA OneArray Ver 5 (miRBase Release 19) 1,253 Phalanx Biotech Inc 2014-02-20 Phalanx Biotech Inc Mus musculus
Mus musculus
Oligo Array spotted oligonucleotide, Phalanx Mouse miRNA OneArray Ver 5 (miRBase Release 19),
7 GPL18311 Phalanx Rat miRNA OneArray Ver 5 (miRBase Release 19) 721 Phalanx Biotech Inc 2014-02-20 Phalanx Biotech Inc Rattus norvegicus
Rattus norvegicus
Oligo Array spotted oligonucleotide, Phalanx Rat miRNA OneArray Ver 5 (miRBase Release 19),
8 GPL18163 NimbleGen Mouse DNA Methylation 3x720K CpG Island Plus RefSeq Promoter Array [090618_MM9_CpG_Refseq_Prom_MeDIP] 0 University of Zurich 2014-01-13 NimbleGen Mus musculus
Mus musculus
Oligo Array in situ oligonucleotide, NimbleGen Mouse DNA Methylation 3x720K CpG Island Plus RefSeq Promoter Array [090618_MM9_CpG_Refseq_Prom_MeDIP], Format:3x720K Source: UCSC Build: Hg18, NCBI 36 Probe Length: 50-75mer Median Probe Spacing: 2509bp
9 GPL18145 NimbleGen Mouse 385K RefSeq Promoter Array [2006-06-06_MM8_RefSeq_promoter] 380,409 University of Cambridge 2014-01-07 NimbleGen Systems, Inc. Mus musculus
Mus musculus
Oligo Array in situ oligonucleotide, NimbleGen Mouse 385K RefSeq Promoter Array [2006-06-06_MM8_RefSeq_promoter], Based on mouse genome build mm8 (NCBI Build 36).
10 GPL18140 Agilent-030493 SurePrint G3 Mouse Exon 4x180K Microarray 180,880 Shinshu University School of Medicine 2014-01-07 Agilent Technologies Mus musculus
Mus musculus
Oligo Array in situ oligonucleotide, Agilent-030493 SurePrint G3 Mouse Exon 4x180K Microarray, Mouse4x180KExon Arrays of this design have barcodes that begin with 16030493 or 2530493. Orientation: Features are numbered numbered Left-to-Right, Top-to-Bottom as scanned by an Agilent scanner (barcode on the left, DNA on the back surface, scanned through the glass), matching the FeatureNum output from Agilent's Feature Extraction software. The ID column represents the Agilent Feature Extraction feature number. Rows and columns are numbered as scanned by an Axon Scanner (barcode on the bottom, DNA on the front surface). To match data scanned on an Axon scanner, use the RefNumber column contained in the Agilent-provided GAL file as the ID_REF column in sample submissions.
11 GPL18141 NimbleGen Cavia porcellus 13K 13,269 Shinshu University School of Medicine 2014-01-07 NimbleGen Cavia porcellus
Cavia porcellus
Oligo Array in situ oligonucleotide, NimbleGen Cavia porcellus 13K,
12 GPL18132 NimbleGen Mouse 3X720K [100727_GT_MM9_Ag_recep_ChIP] 690,279 Washington Univeristy in St.Louis 2014-01-02 NimbleGen Mus musculus
Mus musculus
Oligo Array in situ oligonucleotide, NimbleGen Mouse 3X720K [100727_GT_MM9_Ag_recep_ChIP], mm9 DESIGN_ID: 532181 designname: 100727_GT_MM9_Ag_recep_ChIP native array description file: 100727_GT_MM9_Ag_recep_ChIP.ndf native array description file: 100727_GT_MM9_Ag_recep_ChIP.pos
13 GPL18099 IFC UNAM Mouse 22K v1 23,232 Instituto de Fisiología Celular UNAM 2013-12-20 Unidad de Microarreglos, IFC UNAM, México Mus musculus
Mus musculus
Oligo Array spotted oligonucleotide, IFC UNAM Mouse 22K v1,
14 GPL18089 Agilent-019647 Kogan-custom-mouse1 014868 array (Feature Number version) 45,220 UCSF Sandler Center Functional Genomics Core Facility 2013-12-19 Agilent Technologies Mus musculus
Mus musculus
Oligo Array in situ oligonucleotide, Agilent-019647 Kogan-custom-mouse1 014868 array (Feature Number version), Kogan custom mouse array v1 Arrays of this design have barcodes that begin with 16019647 or 2519647. Orientation: Features are numbered numbered Left-to-Right, Top-to-Bottom as scanned by an Agilent scanner (barcode on the left, DNA on the back surface, scanned through the glass), matching the FeatureNum output from Agilent's Feature Extraction software. The ID column represents the Agilent Feature Extraction feature number. Rows and columns are numbered as scanned by an Axon Scanner (barcode on the bottom, DNA on the front surface). To match data scanned on an Axon scanner, use the RefNumber column contained in the Agilent-provided GAL file as the ID_REF column in sample submissions.
15 GPL18090 Agilent-019647 Kogan-custom-mouse1 014868 array (Probe Name version) 41,249 UCSF Sandler Center Functional Genomics Core Facility 2013-12-19 Agilent Technologies Mus musculus
Mus musculus
Oligo Array in situ oligonucleotide, Agilent-019647 Kogan-custom-mouse1 014868 array (Probe Name version), Kogan custom mouse array v1 Arrays of this design have barcodes that begin with 16019647 or 2519647. Orientation: Features are numbered numbered Left-to-Right, Top-to-Bottom as scanned by an Agilent scanner (barcode on the left, DNA on the back surface, scanned through the glass), matching the FeatureNum output from Agilent's Feature Extraction software. The ID column represents the Agilent Feature Extraction feature number. Rows and columns are numbered as scanned by an Axon Scanner (barcode on the bottom, DNA on the front surface). To match data scanned on an Axon scanner, use the RefNumber column contained in the Agilent-provided GAL file as the ID_REF column in sample submissions.
16 GPL17982 Agilent-031931 TGP_Rat_miRBase16and15 (miRNA_IDs) 738 Ono pharmaceutical 2013-11-22 Agilent Technologies Rattus norvegicus
Rattus norvegicus
Oligo Array in situ oligonucleotide, Agilent-031931 TGP_Rat_miRBase16and15 (miRNA_IDs), TGP_Rat_miRBase16and15 Arrays of this design have barcodes that begin with 16031931 or 2531931. Orientation: Features are numbered numbered Left-to-Right, Top-to-Bottom as scanned by an Agilent scanner (barcode on the left, DNA on the back surface, scanned through the glass), matching the FeatureNum output from Agilent's Feature Extraction software. The ID column represents the Agilent Feature Extraction feature number. Rows and columns are numbered as scanned by an Axon Scanner (barcode on the bottom, DNA on the front surface). To match data scanned on an Axon scanner, use the RefNumber column contained in the Agilent-provided GAL file as the ID_REF column in sample submissions.
17 GPL17953 Agilent-028384 SurePrint G3 Mouse Promoter Microarray 2x400K 420,288 Agilent Technologies 2013-11-19 Agilent Technologies Mus musculus
Mus musculus
Oligo Array in situ oligonucleotide, Agilent-028384 SurePrint G3 Mouse Promoter Microarray 2x400K, SurePrint G3 Mouse Promoter Microarray 2x400K Arrays of this design have barcodes that begin with 16028384 or 2528384. Orientation: Features are numbered numbered Left-to-Right, Top-to-Bottom as scanned by an Agilent scanner (barcode on the left, DNA on the back surface, scanned through the glass), matching the FeatureNum output from Agilent's Feature Extraction software. The ID column represents the Agilent Feature Extraction feature number. Rows and columns are numbered as scanned by an Axon Scanner (barcode on the bottom, DNA on the front surface). To match data scanned on an Axon scanner, use the RefNumber column contained in the Agilent-provided GAL file as the ID_REF column in sample submissions.
18 GPL17937 Agilent-022273 MM_repeat 45,220 Johns Hopkins University School of Medicine 2013-11-15 Agilent Technologies Mus musculus
Mus musculus
Oligo Array in situ oligonucleotide, Agilent-022273 MM_repeat, Mouse repeat class probes Arrays of this design have barcodes that begin with 16022273 or 2522273. Orientation: Features are numbered numbered Left-to-Right, Top-to-Bottom as scanned by an Agilent scanner (barcode on the left, DNA on the back surface, scanned through the glass), matching the FeatureNum output from Agilent's Feature Extraction software. The ID column represents the Agilent Feature Extraction feature number. Rows and columns are numbered as scanned by an Axon Scanner (barcode on the bottom, DNA on the front surface). To match data scanned on an Axon scanner, use the RefNumber column contained in the Agilent-provided GAL file as the ID_REF column in sample submissions.
19 GPL17922 Agilent-025450 Mm_bwtie_as 45,220 Johns Hopkins University School of Medicine 2013-11-13 Agilent Technologies Mus musculus
Mus musculus
Oligo Array in situ oligonucleotide, Agilent-025450 Mm_bwtie_as, Mouse repeat probes designed for antisense strand Arrays of this design have barcodes that begin with 16025450 or 2525450. Orientation: Features are numbered numbered Left-to-Right, Top-to-Bottom as scanned by an Agilent scanner (barcode on the left, DNA on the back surface, scanned through the glass), matching the FeatureNum output from Agilent's Feature Extraction software. The ID column represents the Agilent Feature Extraction feature number. Rows and columns are numbered as scanned by an Axon Scanner (barcode on the bottom, DNA on the front surface). To match data scanned on an Axon scanner, use the RefNumber column contained in the Agilent-provided GAL file as the ID_REF column in sample submissions.
20 GPL17923 Agilent-025451 Mm_bwtie_ss 45,220 Johns Hopkins University School of Medicine 2013-11-13 Agilent Technologies Mus musculus
Mus musculus
Oligo Array in situ oligonucleotide, Agilent-025451 Mm_bwtie_ss, Mouse repeat probes for sense strand Arrays of this design have barcodes that begin with 16025451 or 2525451. Orientation: Features are numbered numbered Left-to-Right, Top-to-Bottom as scanned by an Agilent scanner (barcode on the left, DNA on the back surface, scanned through the glass), matching the FeatureNum output from Agilent's Feature Extraction software. The ID column represents the Agilent Feature Extraction feature number. Rows and columns are numbered as scanned by an Axon Scanner (barcode on the bottom, DNA on the front surface). To match data scanned on an Axon scanner, use the RefNumber column contained in the Agilent-provided GAL file as the ID_REF column in sample submissions.
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