Gene Expression Omnibus (GEO) Overview Version:2014-04-12Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(836)
  Primates
(10)
  Rodents
(586)
  Mammals
(39)
  Vertebrates
(49)
  Invertebrates
(184)
  Plants
(231)
  Bacteria
(113)
  Viruses
(2)
  Phages
(0)
  Unclassified
(8)
  All
(2,065)
 
  SAGE NlaIII
(0)
  SAGE RsaI
(0)
  SAGE Sau3A
(0)
  MPSS
(0)
  GeneChip
(280)
  Tiling Array
(40)
  cDNA Array
(4)
  Oligo Array
(104)
  Bead Array
(62)
  Protein Array
(0)
  Antibody
(0)
  RT-PCR
(9)
  HT-Seq
(85)
  Other
(2)
  All
(586)
 
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Title Platform Institute Submission date Species Data size
(probes x samples)
Sample NCBI
FTP
site
Animal Plant  
brain blood connective reproductive muscular digestive liver lung urinary endo/exo-crine embryo adult aerial structure young aerial structure root meristem/growing tissue flower/sexual organ seed/fruit/grain pooled unclassified
1 Lgr4/5/6 family members reside in Frizzled-Lrp complexes and mediate signaling by the Wnt agonist Rspondin1 (GSE28265) [Oligo Array] Agilent-014868 Whole Mouse Genome Microarray 4x44K G4122F (Feature Number version) (GPL4134) University Clinic Dresden 2011-03-30 Mus musculus
Mus musculus
452,200
(45,220 x 10)
10 by_platform
by_series
2 Alternative splicing changes in A. fumigatus sensitized mice (GSE28258) [Oligo Array] Mouse alternative splice junctions array (GPL13166) Columbia University 2011-03-29 Mus musculus
Mus musculus
16,096
(1,006 x 16)
16 by_platform
by_series
3 A molecular and phenotypic integrative approach to identify a no effect dose level for anti-androgen induced testicular toxicity (GSE28202) [Oligo Array] Agilent-014879 Whole Rat Genome Microarray 4x44K G4131F (Probe Name version) (GPL7294) Bayer Cropscience 2011-03-28 Rattus norvegicus
Rattus norvegicus
1,727,040
(41,120 x 42)
42 by_platform
by_series
4 Gene Expression Analysis of Transgenic Myc-Driven Liver Tumor Formation and Regression (GSE28198) [Oligo Array] Agilent-014868 Whole Mouse Genome Microarray 4x44K G4122F (Probe Name version) (GPL7202) UCSF 2011-03-28 Mus musculus
Mus musculus
619,170
(41,278 x 15)
15 by_platform
by_series
5 Altered gene expression in the mouse heart after 2-day fasting (GSE28226) [Oligo Array] Agilent-014868 Whole Mouse Genome Microarray 4x44K G4122F (Probe Name version) (GPL7202) Keio Univ School of Medicine 2011-03-28 Mus musculus
Mus musculus
330,224
(41,278 x 8)
8 by_platform
by_series
6 DNA Microarray Analysis Approach for Unraveling the Ischemic Mouse Brain Transcriptome (GSE28201) [Oligo Array] Agilent-014868 Whole Mouse Genome Microarray 4x44K G4122F (Feature Number version) (GPL4134) University of Tsukuba 2011-03-28 Mus musculus
Mus musculus
180,880
(45,220 x 4)
4 by_platform
by_series
7 Seeking Gene Candidates Responsible for Developmental Origins of Health and Disease (DOHaD) (GSE28175) [Oligo Array] Agilent-014868 Whole Mouse Genome Microarray 4x44K G4122F (Feature Number version) (GPL4134) University of Tsukuba 2011-03-25 Mus musculus
Mus musculus
180,880
(45,220 x 4)
4 by_platform
by_series
8 Alteration of gene expression patterns in the liver and spleen following exposure to nucleoprotein diet in the mouse LPS injection model (GSE28176) [Oligo Array] Agilent-014868 Whole Mouse Genome Microarray 4x44K G4122F (Feature Number version) (GPL4134) University of Tsukuba 2011-03-25 Mus musculus
Mus musculus
180,880
(45,220 x 4)
2 2 by_platform
by_series
9 Novel age related alterations revealed by a comparative kinetic transcriptome analysis of naïve CD4+ and CD8+ T cells from young and old animals. (GSE28165) [Oligo Array] Agilent-014868 Whole Mouse Genome Microarray 4x44K G4122F (Probe Name version) (GPL7202) Mayo Clinic College of Medicine 2011-03-24 Mus musculus
Mus musculus
1,155,784
(41,278 x 28)
28 by_platform
by_series
10 Differential gene expression in the airway epithelium of beta6 ko mice chronically challenged with OVA (GSE28168) [Oligo Array] Agilent-014868 Whole Mouse Genome Microarray 4x44K G4122F (Probe Name version) (GPL7202) UCSF 2011-03-24 Mus musculus
Mus musculus
660,448
(41,278 x 16)
16 by_platform
by_series
11 Effect of ECAT11 disruption in mouse ESCs (GSE28145) [Oligo Array] Agilent-014868 Whole Mouse Genome Microarray 4x44K G4122F (Probe Name version) (GPL7202) Center for iPS Cell Research and Applicaton (CiRA), Kyoto University 2011-03-24 Mus musculus
Mus musculus
206,390
(41,278 x 5)
5 by_platform
by_series
12 Loss of p53 in enterocytes generates an inflammatory microenvironment enabling invasion and metastasis of carcinogen-induced colorectal tumors (GSE28129) [Oligo Array] Agilent-027411 SurePrint G3 Mouse CGH Microarray 4x180K (Feature Number version) (GPL10449) University of Ulm 2011-03-23 Mus musculus
Mus musculus
723,520
(180,880 x 4)
4 by_platform
by_series
13 Development and Preclinical Efficacy of Novel Transforming Growth Factor-β1 (TGFβ1) siRNAs for Pulmonary Fibrosis (GSE28122) [Oligo Array] 3D-Gene Mouse miRNA Oligo chip V14.1.0.1 (GPL13285) Toray Industries,Inc. 2011-03-23 Mus musculus
Mus musculus
6,651
(739 x 9)
9 by_platform
by_series
14 Glucosylceramide fed mice skin before SDS treatment (0d), after SDS treatment (2d) (GSE28086) [Oligo Array] Agilent-014868 Whole Mouse Genome Microarray 4x44K G4122F (Probe Name version) (GPL7202) Shiseido Research Center 2011-03-22 Mus musculus
Mus musculus
288,946
(41,278 x 7)
7 by_platform
by_series
15 DNA methylation data from AML12 cells during EMT (GSE27968) [Oligo Array] NimbleGen Mouse 2.1M array [Feinberg_MM8_Me_HX1] (GPL10680) Johns Hopkins University School of Medicine 2011-03-15 Mus musculus
Mus musculus
25,974,144
(2,164,512 x 12)
12 by_platform
by_series
16 Insulin biosynthesis in neuronal progenitors derived from adult hippocampus and the olfactory bulb (GSE27956) [Oligo Array] Agilent-014879 Whole Rat Genome Microarray 4x44K G4131F (Feature Number version) (GPL4135) National Institute of Advanced Industrial Science Technology (AIST) 2011-03-14 Rattus norvegicus
Rattus norvegicus
180,880
(45,220 x 4)
4 by_platform
by_series
17 Gene-chip studies of adipogenesis-regulated microRNAs in mouse primary adipocytes and human obesity (GSE27951) [Oligo Array] EXIQON miRCURYâ„¢ V8.1 LNA array (GPL13273) Edinburgh University 2011-03-14 Mus musculus
Mus musculus
80,640
(6,720 x 12)
12 by_platform
by_series
18 Lgr4 is required for Paneth cell differentiation and maintenance of intestinal stem cells (GSE27904) [Oligo Array] ULB MEEBO Mouse 39K array version 1 (GPL6943) ULB 2011-03-11 Mus musculus
Mus musculus
310,272
(38,784 x 8)
8 by_platform
by_series
19 Gene-chip studies of adipogenesis-regulated microRNAs in mouse primary adipocytes and human obesity (Exiqon) (GSE27912) [Oligo Array] EXIQON miRCURYâ„¢ V8.1 LNA array (GPL13273) Edinburgh University 2011-03-11 Mus musculus
Mus musculus
80,640
(6,720 x 12)
12 by_platform
by_series
20 MAP3K4/CBP Regulated H2B acetylation Controls Epithelial-Mesenchymal Transition in Trophoblast Stem Cells (GSE27883) [Oligo Array] Agilent-014868 Whole Mouse Genome Microarray 4x44K G4122F (Feature Number version) (GPL4134) UNC-Chapel Hill 2011-03-10 Mus musculus
Mus musculus
452,200
(45,220 x 10)
10 by_platform
by_series
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