Gene Expression Omnibus (GEO) Overview Version:2014-04-12Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(22,139)
  Primates
(288)
  Rodents
(15,364)
  Mammals
(970)
  Vertebrates
(1,364)
  Invertebrates
(4,819)
  Plants
(7,611)
  Bacteria
(3,409)
  Viruses
(59)
  Phages
(8)
  Unclassified
(433)
  All
(56,529)
 
  SAGE NlaIII
(76)
  SAGE RsaI
(1)
  SAGE Sau3A
(10)
  MPSS
(5)
  GeneChip
(7,316)
  Tiling Array
(312)
  cDNA Array
(732)
  Oligo Array
(3,361)
  Bead Array
(1,268)
  Protein Array
(0)
  Antibody
(5)
  RT-PCR
(117)
  HT-Seq
(2,116)
  Other
(45)
  All
(15,364)
 
1   |   2   |   3   |   4   |   5      »      [169]
Title Platform Institute Submission date Species Data size
(probes x samples)
Sample NCBI
FTP
site
Animal Plant  
brain blood connective reproductive muscular digestive liver lung urinary endo/exo-crine embryo adult aerial structure young aerial structure root meristem/growing tissue flower/sexual organ seed/fruit/grain pooled unclassified
1 Downregulation of microRNA expression in the lungs of rats exposed to cigarette smoke (GSE13260) [Oligo Array] OSU-CCC/miRNACHIPv2 (GPL7500) University of Genoa 2008-10-17 Rattus sp.
Rattus sp.
23,040
(11,520 x 2)
2 by_platform
by_series
2 Rat MeDIP Array, naïve, epileptic, and adenosine treated (GSE45932) [Oligo Array] NimbleGen Rat CpG Island Plus RefSeq Promoter 720k array [100718_RN34_CpG_Refseq_Prom_MeDIP] (GPL16994) Legacy Research Institute 2013-04-10 Rattus rattus
Rattus rattus
2,141,010
(713,670 x 3)
3 by_platform
by_series
3 Profiling of copy-number variation between DNA isolation from different tissues of BN and ACI rats (GSE45308) [Oligo Array] Hubrecht Rat 2.1M HX1 (GPL9991) Hubrecht Institute 2013-03-19 Rattus norvegicus
Rattus norvegicus
51,410,304
(2,142,096 x 24)
24 by_platform
by_series
4 Liver Pharmacology and Xenobiotic Response Repertoire (GSE8858) [Oligo Array] GE Healthcare/Amersham Biosciences CodeLink UniSet Rat I Bioarray, layout EXP5280X2-584 (GPL5424) Iconix Biosciences 2007-08-23 Rattus norvegicus
Rattus norvegicus
24,767,895
(10,455 x 2,369)
2,369 by_platform
by_series
5 Identification of biomarkers that distinguish chemical contaminants using a gradient feature selection method (GSE19662) [Oligo Array] Agilent-014879 Whole Rat Genome Microarray 4x44K G4131F (Feature Number version) (GPL4135) USACE-ERDC 2009-12-27 Rattus norvegicus
Rattus norvegicus
24,011,820
(45,220 x 531)
531 by_platform
by_series
6 Liver Pharmacology and Xenobiotic Response Repertoire (GSE8858) [Oligo Array] GE Healthcare/Amersham Biosciences CodeLinkâ„¢ UniSet Rat I Bioarray, layout EXP5280X2-648 (GPL5426) Iconix Biosciences 2007-08-23 Rattus norvegicus
Rattus norvegicus
19,747,701
(10,399 x 1,899)
1,899 by_platform
by_series
7 Profiling of the response of genes in the rat liver to hepatotoxicants (GSE15785) [Oligo Array] Agilent-011868_D_WithSGCtrls_20030627 Rat Oligo Microarray (GPL8466) NIEHS 2009-04-22 Rattus norvegicus
Rattus norvegicus
14,039,700
(22,075 x 636)
72 564 by_platform
by_series
8 PPARalpha Agonists Induce a Fiber-Type Selective Transcriptional Response in Rat Skeletal Muscle (GSE5100) [Oligo Array] Rosetta/Merck Rat 50k v2.1 Array 1 microarray (GPL3631) Merck & Co. 2006-06-19 Rattus norvegicus
Rattus norvegicus
11,448,052
(23,653 x 484)
132 147 205 by_platform
by_series
9 Liver Pharmacology and Xenobiotic Response Repertoire (GSE8858) [Oligo Array] GE Healthcare/Amersham Biosciences CodeLink UniSet Rat I Bioarray, layout EXP5280X2-613 (GPL5425) Iconix Biosciences 2007-08-23 Rattus norvegicus
Rattus norvegicus
10,915,020
(10,455 x 1,044)
1,044 by_platform
by_series
10 Liver toxicity induced by munitions compounds TNT, 2,6-DNT, 2,4-DNT, 4A-DNT, and 2A-DNT (GSE19628) [Oligo Array] Agilent-014879 Whole Rat Genome Microarray 4x44K G4131F (Feature Number version) (GPL4135) USACE-ERDC 2009-12-23 Rattus norvegicus
Rattus norvegicus
8,998,780
(45,220 x 199)
159 40 by_platform
by_series
11 Effects of an antipsychotic (Olanzapine) involves alterations in gene specific DNA methylation (GSE52615) [Oligo Array] NimbleGen Rat CpG Island Plus RefSeq Promoter 720k array [100718_RN34_CpG_Refseq_Prom_MeDIP] (GPL16994) University of Western Ontario 2013-11-21 Rattus norvegicus
Rattus norvegicus
8,564,040
(713,670 x 12)
8 4 by_platform
by_series
12 Blood and liver exposed to acetaminophen (APAP) (GSE5652) [Oligo Array] Agilent-011868 Rat Oligo Microarray G4130A (Feature Number version) (GPL890) NIEHS 2006-08-28 Rattus norvegicus
Rattus norvegicus
8,036,700
(22,575 x 356)
212 144 by_platform
by_series
13 Genome-wide DNA methylation in normal and IUGR pancreatic islets (GSE16839) [Oligo Array] Albert Einstein College of Medicine RN4_HELP_HD2 array (GPL8770) Albert Einstein College of Medicine 2009-06-25 Rattus norvegicus
Rattus norvegicus
7,338,408
(917,301 x 8)
8 by_platform
by_series
14 Rat liver. Control vs. Chemical treated: time course (GSE16752) [Oligo Array] CERI Rat 6.7K ToxArrayIII (GPL8576) Chemicals Evaluation and Research Institute, Japan 2009-06-23 Rattus norvegicus
Rattus norvegicus
6,984,069
(6,709 x 1,041)
1,041 by_platform
by_series
15 Chromosomal aberration of asbestos-induced malignant mesothelioma in rats (GSE36577) [Oligo Array] Agilent-015223 Rat Genome CGH Microarray 244A (GPL15358) Nagoya University 2012-03-16 Rattus norvegicus
Rattus norvegicus
6,574,608
(243,504 x 27)
27 by_platform
by_series
16 Non-genotoxic Hepatocarcinogens (GSE8251) [Oligo Array] GE Healthcare/Amersham Biosciences CodeLinkâ„¢ UniSet Rat I Bioarray, layout EXP5280X2-648 (GPL5426) Iconix Biosciences 2007-06-22 Rattus norvegicus
Rattus norvegicus
5,209,899
(10,399 x 501)
501 by_platform
by_series
17 Gene Expression Profiling In Rat Smooth Muscle Cells Modulated by Rapamycin and Paclitaxel. (GSE5337) [Oligo Array] Agilent-011868 Rat Oligo Microarray G4130A (Feature Number version) (GPL890) UNC 2006-07-18 Rattus norvegicus
Rattus norvegicus
5,056,800
(22,575 x 224)
224 by_platform
by_series
18 Classification of a large micro-array dataset. Algorithm comparison and analysis of drug signatures. (GSE2187) [Oligo Array] Rat Uniset 10K (GPL1820) Iconix Biosciences 2005-01-25 Rattus norvegicus
Rattus norvegicus
5,027,655
(8,565 x 587)
587 by_platform
by_series
19 A Genomics-Based Analysis of Relative Potencies of Dioxin-Like Compounds in Primary Rat Hepatocytes (GSE49473) [Oligo Array] Agilent-014879 Whole Rat Genome Microarray 4x44K G4131F (Probe Name version) (GPL7294) The Dow Chemical Company 2013-08-01 Rattus norvegicus
Rattus norvegicus
4,728,800
(41,120 x 115)
115 by_platform
by_series
20 A Gene Expression Signature that Predicts the Future Onset of Drug-Induced Renal Tubular Toxicity (GSE3210) [Oligo Array] Rat Uniset 10K (GPL1820) Iconix Biosciences 2005-08-26 Rattus norvegicus
Rattus norvegicus
4,625,100
(8,565 x 540)
540 by_platform
by_series
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