Gene Expression Omnibus (GEO) Overview Version:2013-04-06Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.

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Data Unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(502,421)
  Primates
(4,928)
  Rodents
(181,106)
  Mammals
(16,260)
  Vertebrates
(18,263)
  Invertebrates
(37,338)
  Plants
(91,454)
  Bacteria
(39,082)
  Viruses
(1,266)
  Phages
(101)
  Unclassified
(5,242)
  All
(898,944)
 
  SAGE NlaIII
(718)
  SAGE RsaI
(3)
  SAGE Sau3A
(37)
  MPSS
(100)
  GeneChip
(89,973)
  Tiling Array
(2,000)
  cDNA Array
(11,116)
  Oligo Array
(53,181)
  Bead Array
(13,914)
  Protein Array
(0)
  Antibody
(22)
  RT-PCR
(885)
  HT-Seq
(8,762)
  Other
(395)
  All
(181,106)
 
  brain
(0)
  blood
(0)
  connective
(3,218)
  reproductive
(1,285)
  muscular
(2,414)
  digestive
(1,063)
  liver
(16,402)
  lung
(2,207)
  urinary
(1,338)
  endo/exo-crine
(0)
  embryo
(1,217)
  adult aerial structure
(0)
  young aerial structure
(0)
  root
(0)
  meristem/growing tissue
(0)
  flower/sexual organ
(0)
  seed/fruit/grain
(0)
  pooled
(3,312)
  unclassified
(0)
  all
(53,181)
 
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Sample ID Title Number of Data Institute Submission date Platform Sample type Species Organ class Reasoning of the classification
Keywords used for the classification are shown with bold font.
1 GSM564433 E3.5-Rep1 2,137,504 CNRS 2010-07-08 [Oligo Array] NimbleGen Mouse MM8 Deluxe Promoter Array (GPL9485) genomic Mus musculus
Mus musculus
embryo MeDIP in E3.5 blastocysts
2 GSM564434 E3.5-Rep2 2,137,504 CNRS 2010-07-08 [Oligo Array] NimbleGen Mouse MM8 Deluxe Promoter Array (GPL9485) genomic Mus musculus
Mus musculus
embryo MeDIP in E3.5 blastocysts
3 GSM564435 E6.5Epiblast-Rep1 2,137,504 CNRS 2010-07-08 [Oligo Array] NimbleGen Mouse MM8 Deluxe Promoter Array (GPL9485) genomic Mus musculus
Mus musculus
embryo MeDIP DNA from epiblast Input DNA from epiblast
4 GSM564436 E6.5Epiblast-Rep2 2,137,504 CNRS 2010-07-08 [Oligo Array] NimbleGen Mouse MM8 Deluxe Promoter Array (GPL9485) genomic Mus musculus
Mus musculus
embryo MeDIP DNA from epiblast Input DNA from epiblast
5 GSM564437 E6.5Epiblast-Rep3 2,137,504 CNRS 2010-07-08 [Oligo Array] NimbleGen Mouse MM8 Deluxe Promoter Array (GPL9485) genomic Mus musculus
Mus musculus
embryo MeDIP DNA from epiblast Input DNA from epiblast
6 GSM564438 E9.5-Rep1 2,137,504 CNRS 2010-07-08 [Oligo Array] NimbleGen Mouse MM8 Deluxe Promoter Array (GPL9485) genomic Mus musculus
Mus musculus
embryo MeDIP in whole E9.5 embryos
7 GSM564439 E9.5-Rep2 2,137,504 CNRS 2010-07-08 [Oligo Array] NimbleGen Mouse MM8 Deluxe Promoter Array (GPL9485) genomic Mus musculus
Mus musculus
embryo MeDIP in whole E9.5 embryos
8 GSM564440 E9.5-Rep3 2,137,504 CNRS 2010-07-08 [Oligo Array] NimbleGen Mouse MM8 Deluxe Promoter Array (GPL9485) genomic Mus musculus
Mus musculus
embryo MeDIP in whole E9.5 embryos
9 GSM783855 E7.5Epiblast_rep1 2,137,504 CNRS 2011-08-22 [Oligo Array] NimbleGen Mouse MM8 Deluxe Promoter Array (GPL9485) genomic Mus musculus
Mus musculus
embryo MeDIP DNA from E7.5 epiblasts Input DNA from E7.5 epiblasts
10 GSM783856 E7.5Epiblast_rep2 2,137,504 CNRS 2011-08-22 [Oligo Array] NimbleGen Mouse MM8 Deluxe Promoter Array (GPL9485) genomic Mus musculus
Mus musculus
embryo MeDIP DNA from E7.5 epiblasts Input DNA from E7.5 epiblasts
11 GSM783857 maleE13.5PGC_rep1 2,137,504 CNRS 2011-08-22 [Oligo Array] NimbleGen Mouse MM8 Deluxe Promoter Array (GPL9485) genomic Mus musculus
Mus musculus
embryo MeDIP in PGCs isolated from male E13.5 embryos
12 GSM783858 maleE13.5PGC_rep2 2,137,504 CNRS 2011-08-22 [Oligo Array] NimbleGen Mouse MM8 Deluxe Promoter Array (GPL9485) genomic Mus musculus
Mus musculus
embryo MeDIP in PGCs isolated from male E13.5 embryos
13 GSM783859 maleE13.5PGC_rep3 2,137,504 CNRS 2011-08-22 [Oligo Array] NimbleGen Mouse MM8 Deluxe Promoter Array (GPL9485) genomic Mus musculus
Mus musculus
embryo MeDIP in PGCs isolated from male E13.5 embryos
14 GSM783860 femaleE13.5PGC_rep1 2,137,504 CNRS 2011-08-22 [Oligo Array] NimbleGen Mouse MM8 Deluxe Promoter Array (GPL9485) genomic Mus musculus
Mus musculus
embryo MeDIP in PGCs isolated from female E13.5 embryos
15 GSM783861 femaleE13.5PGC_rep2 2,137,504 CNRS 2011-08-22 [Oligo Array] NimbleGen Mouse MM8 Deluxe Promoter Array (GPL9485) genomic Mus musculus
Mus musculus
embryo MeDIP in PGCs isolated from female E13.5 embryos
16 GSM783862 femaleE13.5PGC_rep3 2,137,504 CNRS 2011-08-22 [Oligo Array] NimbleGen Mouse MM8 Deluxe Promoter Array (GPL9485) genomic Mus musculus
Mus musculus
embryo MeDIP in PGCs isolated from female E13.5 embryos
17 GSM426758 Embryonic Stem Cell LaminB1 1 2,121,749 Netherlands Cancer Institute 2009-07-10 [Oligo Array] Nimblegen Mouse HD2 whole genome (GPL8840) genomic Mus musculus
Mus musculus
embryo Dam-LaminB1 DamID DNA from Embryonic Stemm Cells Dam DamID DNA from Embryonic Stemm Cells
18 GSM426759 Embryonic Stem Cell LaminB1 2 2,121,749 Netherlands Cancer Institute 2009-07-10 [Oligo Array] Nimblegen Mouse HD2 whole genome (GPL8840) genomic Mus musculus
Mus musculus
embryo Dam DamID DNA from Embryonic Stemm Cells Dam-LaminB1 DamID DNA from Embryonic Stemm Cells
19 GSM1092229 PGK12.1ES_Control RNAi_H2AZac_promoter 2,082,810 University of Washington 2013-03-04 [Oligo Array] NimbleGen Mouse 2.1M deluxe promoter array (ver. 2) (GPL16143) genomic Mus musculus
Mus musculus
embryo H2AZac ChIP DNA from mouse female PGK12.1 ES cells treated by negative control siRNAs ChIP input DNA
20 GSM1092230 PGK12.1ES_MOFRNAi_H2AZac_promoter 2,082,810 University of Washington 2013-03-04 [Oligo Array] NimbleGen Mouse 2.1M deluxe promoter array (ver. 2) (GPL16143) genomic Mus musculus
Mus musculus
embryo H2AZac ChIP DNA from mouse female PGK12.1 ES cells treated by MOF siRNAs ChIP input DNA
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