Gene Expression Omnibus (GEO) Overview Version´╝Ü2014-04-12Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.

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Data Unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(615,734)
  Primates
(5,814)
  Rodents
(225,055)
  Mammals
(20,968)
  Vertebrates
(22,581)
  Invertebrates
(46,584)
  Plants
(107,706)
  Bacteria
(45,091)
  Viruses
(1,432)
  Phages
(112)
  Unclassified
(6,986)
  All
(1,101,311)
 
  SAGE NlaIII
(718)
  SAGE RsaI
(3)
  SAGE Sau3A
(37)
  MPSS
(100)
  GeneChip
(108,928)
  Tiling Array
(2,164)
  cDNA Array
(11,311)
  Oligo Array
(60,928)
  Bead Array
(21,037)
  Protein Array
(0)
  Antibody
(28)
  RT-PCR
(1,166)
  HT-Seq
(17,667)
  Other
(968)
  All
(225,055)
 
  brain
(0)
  blood
(0)
  connective
(3,587)
  reproductive
(1,615)
  muscular
(2,806)
  digestive
(1,202)
  liver
(17,372)
  lung
(3,009)
  urinary
(1,616)
  endo/exo-crine
(1,409)
  embryo
(1,499)
  adult aerial structure
(0)
  young aerial structure
(0)
  root
(0)
  meristem/growing tissue
(0)
  flower/sexual organ
(0)
  seed/fruit/grain
(0)
  pooled
(3,629)
  unclassified
(0)
  all
(60,928)
 
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Sample ID Title Number of Data Institute Submission date Platform Sample type Species Organ class Reasoning of the classification
Keywords used for the classification are shown with bold font.
1 GSM1248684 mouse 1 HmeDIP liver 5hmC profile 2,171,066 University of Edinburgh 2013-10-23 [Oligo Array] Nimblegen Mouse 2M Tiled Array_2o4 [100205_MM9_Economy_MeDIP_02_HX] (GPL17802) genomic Mus musculus
Mus musculus
liver/hepato normal whole liver
2 GSM1248685 mouse 2 HmeDIP liver 5hmC profile 2,171,066 University of Edinburgh 2013-10-23 [Oligo Array] Nimblegen Mouse 2M Tiled Array_2o4 [100205_MM9_Economy_MeDIP_02_HX] (GPL17802) genomic Mus musculus
Mus musculus
liver/hepato normal whole liver
3 GSM1248686 mouse 1 hMeSeal liver 5hmC profile 2,171,066 University of Edinburgh 2013-10-23 [Oligo Array] Nimblegen Mouse 2M Tiled Array_2o4 [100205_MM9_Economy_MeDIP_02_HX] (GPL17802) genomic Mus musculus
Mus musculus
liver/hepato normal whole liver
4 GSM1248687 mouse 2 hMeSeal liver 5hmC profile 2,171,066 University of Edinburgh 2013-10-23 [Oligo Array] Nimblegen Mouse 2M Tiled Array_2o4 [100205_MM9_Economy_MeDIP_02_HX] (GPL17802) genomic Mus musculus
Mus musculus
liver/hepato normal whole liver
5 GSM269606 C57BL/6J Liver 135500_SOM01KY1 2,149,887 Children's Hospital, Boston 2008-02-27 [Oligo Array] NimbleGen Mouse 2.1M NCBI36 (GPL6436) genomic Mus musculus
Mus musculus
liver/hepato C57BL/6J Liver 135500_SOM01KY1
6 GSM1016353 control mouse 1 liver 5hmC profile (7d) 2,085,858 University of Edinburgh 2012-10-05 [Oligo Array] NimbleGen Mouse 2.1M deluxe promoter array (ver. 2) (GPL16143) genomic Mus musculus
Mus musculus
liver/hepato normal whole liver
7 GSM1016354 control mouse 2 liver 5hmC profile (7d) 2,085,858 University of Edinburgh 2012-10-05 [Oligo Array] NimbleGen Mouse 2.1M deluxe promoter array (ver. 2) (GPL16143) genomic Mus musculus
Mus musculus
liver/hepato normal whole liver
8 GSM1016355 control mouse 3 liver 5hmC profile (7d) 2,085,858 University of Edinburgh 2012-10-05 [Oligo Array] NimbleGen Mouse 2.1M deluxe promoter array (ver. 2) (GPL16143) genomic Mus musculus
Mus musculus
liver/hepato normal whole liver
9 GSM1016356 control mouse 4 liver 5hmC profile (7d) 2,085,858 University of Edinburgh 2012-10-05 [Oligo Array] NimbleGen Mouse 2.1M deluxe promoter array (ver. 2) (GPL16143) genomic Mus musculus
Mus musculus
liver/hepato normal whole liver
10 GSM1016357 control mouse 5 liver 5hmC profile (7d) 2,085,858 University of Edinburgh 2012-10-05 [Oligo Array] NimbleGen Mouse 2.1M deluxe promoter array (ver. 2) (GPL16143) genomic Mus musculus
Mus musculus
liver/hepato normal whole liver
11 GSM1016358 pb treated mouse 1 liver 5hmC profile (7d) 2,085,858 University of Edinburgh 2012-10-05 [Oligo Array] NimbleGen Mouse 2.1M deluxe promoter array (ver. 2) (GPL16143) genomic Mus musculus
Mus musculus
liver/hepato 7 day PB exposed whole liver PB exposed mouse liver tissue
12 GSM1016359 pb treated mouse 2 liver 5hmC profile (7d) 2,085,858 University of Edinburgh 2012-10-05 [Oligo Array] NimbleGen Mouse 2.1M deluxe promoter array (ver. 2) (GPL16143) genomic Mus musculus
Mus musculus
liver/hepato 7 day PB exposed whole liver PB exposed mouse liver tissue
13 GSM1016360 pb treated mouse 3 liver 5hmC profile (7d) 2,085,858 University of Edinburgh 2012-10-05 [Oligo Array] NimbleGen Mouse 2.1M deluxe promoter array (ver. 2) (GPL16143) genomic Mus musculus
Mus musculus
liver/hepato 7 day PB exposed whole liver PB exposed mouse liver tissue
14 GSM1016361 pb treated mouse 4 liver 5hmC profile (7d) 2,085,858 University of Edinburgh 2012-10-05 [Oligo Array] NimbleGen Mouse 2.1M deluxe promoter array (ver. 2) (GPL16143) genomic Mus musculus
Mus musculus
liver/hepato 7 day PB exposed whole liver PB exposed mouse liver tissue
15 GSM1016362 pb treated mouse 5 liver 5hmC profile (7d) 2,085,858 University of Edinburgh 2012-10-05 [Oligo Array] NimbleGen Mouse 2.1M deluxe promoter array (ver. 2) (GPL16143) genomic Mus musculus
Mus musculus
liver/hepato 7 day PB exposed whole liver PB exposed mouse liver tissue
16 GSM1016379 control mouse 1 liver 5hmC profile (1d) 2,085,858 University of Edinburgh 2012-10-05 [Oligo Array] NimbleGen Mouse 2.1M deluxe promoter array (ver. 2) (GPL16143) genomic Mus musculus
Mus musculus
liver/hepato normal whole liver
17 GSM1016380 control mouse 2 liver 5hmC profile (1d) 2,085,858 University of Edinburgh 2012-10-05 [Oligo Array] NimbleGen Mouse 2.1M deluxe promoter array (ver. 2) (GPL16143) genomic Mus musculus
Mus musculus
liver/hepato normal whole liver
18 GSM1016381 control mouse 3 liver 5hmC profile (1d) 2,085,858 University of Edinburgh 2012-10-05 [Oligo Array] NimbleGen Mouse 2.1M deluxe promoter array (ver. 2) (GPL16143) genomic Mus musculus
Mus musculus
liver/hepato normal whole liver
19 GSM1016382 control mouse 4 liver 5hmC profile (1d) 2,085,858 University of Edinburgh 2012-10-05 [Oligo Array] NimbleGen Mouse 2.1M deluxe promoter array (ver. 2) (GPL16143) genomic Mus musculus
Mus musculus
liver/hepato normal whole liver
20 GSM1016383 control mouse 5 liver 5hmC profile (1d) 2,085,858 University of Edinburgh 2012-10-05 [Oligo Array] NimbleGen Mouse 2.1M deluxe promoter array (ver. 2) (GPL16143) genomic Mus musculus
Mus musculus
liver/hepato normal whole liver
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