Gene Expression Omnibus (GEO) Overview Version´╝Ü2014-04-12Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data Unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(615,734)
  Primates
(5,814)
  Rodents
(225,055)
  Mammals
(20,968)
  Vertebrates
(22,581)
  Invertebrates
(46,584)
  Plants
(107,706)
  Bacteria
(45,091)
  Viruses
(1,432)
  Phages
(112)
  Unclassified
(6,986)
  All
(1,101,311)
 
  SAGE NlaIII
(718)
  SAGE RsaI
(3)
  SAGE Sau3A
(37)
  MPSS
(100)
  GeneChip
(108,928)
  Tiling Array
(2,164)
  cDNA Array
(11,311)
  Oligo Array
(60,928)
  Bead Array
(21,037)
  Protein Array
(0)
  Antibody
(28)
  RT-PCR
(1,166)
  HT-Seq
(17,667)
  Other
(968)
  All
(225,055)
 
  brain
(6,190)
  blood
(4,759)
  connective
(3,587)
  reproductive
(1,615)
  muscular
(2,806)
  digestive
(1,202)
  liver
(17,372)
  lung
(3,009)
  urinary
(1,616)
  endo/exo-crine
(1,409)
  embryo
(1,499)
  adult aerial structure
(0)
  young aerial structure
(0)
  root
(0)
  meristem/growing tissue
(0)
  flower/sexual organ
(0)
  seed/fruit/grain
(0)
  pooled
(3,629)
  unclassified
(12,235)
  all
(60,928)
 
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Sample ID Title Number of Data Institute Submission date Platform Sample type Species Organ class Reasoning of the classification
Keywords used for the classification are shown with bold font.
1 GSM1272703 Control Liver 1 713,670 University of Western Ontario 2013-11-21 [Oligo Array] NimbleGen Rat CpG Island Plus RefSeq Promoter 720k array [100718_RN34_CpG_Refseq_Prom_MeDIP] (GPL16994) genomic Rattus norvegicus
Rattus norvegicus
liver/hepato Input DNA from Liver ChIP DNA from Liver
2 GSM1272704 Control Liver 2 713,670 University of Western Ontario 2013-11-21 [Oligo Array] NimbleGen Rat CpG Island Plus RefSeq Promoter 720k array [100718_RN34_CpG_Refseq_Prom_MeDIP] (GPL16994) genomic Rattus norvegicus
Rattus norvegicus
liver/hepato Input DNA from Liver ChIP DNA from Liver
3 GSM1272709 Experimental Liver 1 713,670 University of Western Ontario 2013-11-21 [Oligo Array] NimbleGen Rat CpG Island Plus RefSeq Promoter 720k array [100718_RN34_CpG_Refseq_Prom_MeDIP] (GPL16994) genomic Rattus norvegicus
Rattus norvegicus
liver/hepato Input DNA from Liver ChIP DNA from Liver
4 GSM1272710 Experimental Liver 2 713,670 University of Western Ontario 2013-11-21 [Oligo Array] NimbleGen Rat CpG Island Plus RefSeq Promoter 720k array [100718_RN34_CpG_Refseq_Prom_MeDIP] (GPL16994) genomic Rattus norvegicus
Rattus norvegicus
liver/hepato Input DNA from Liver ChIP DNA from Liver
5 GSM489390 RatL24DNT24h_4.98_1 45,220 USACE-ERDC 2009-12-23 [Oligo Array] Agilent-014879 Whole Rat Genome Microarray 4x44K G4131F (Feature Number version) (GPL4135) RNA Rattus norvegicus
Rattus norvegicus
liver/hepato Gene Expression after 24hexposed to24DNT_4.98mg/kgin rat liver
6 GSM489391 RatL24DNT24h_49.8_1 45,220 USACE-ERDC 2009-12-23 [Oligo Array] Agilent-014879 Whole Rat Genome Microarray 4x44K G4131F (Feature Number version) (GPL4135) RNA Rattus norvegicus
Rattus norvegicus
liver/hepato Gene Expression after 24hexposed to24DNT_49.8mg/kgin rat liver
7 GSM489392 RatL24DNT24h_99_1 45,220 USACE-ERDC 2009-12-23 [Oligo Array] Agilent-014879 Whole Rat Genome Microarray 4x44K G4131F (Feature Number version) (GPL4135) RNA Rattus norvegicus
Rattus norvegicus
liver/hepato Gene Expression after 24hexposed to24DNT_99.5mg/kgin rat liver
8 GSM489393 RatL24DNT24h_199_1 45,220 USACE-ERDC 2009-12-23 [Oligo Array] Agilent-014879 Whole Rat Genome Microarray 4x44K G4131F (Feature Number version) (GPL4135) RNA Rattus norvegicus
Rattus norvegicus
liver/hepato Gene Expression after 24hexposed to24DNT_199mg/kgin rat liver
9 GSM489395 RatL24DNT24h_4.98_2 45,220 USACE-ERDC 2009-12-23 [Oligo Array] Agilent-014879 Whole Rat Genome Microarray 4x44K G4131F (Feature Number version) (GPL4135) RNA Rattus norvegicus
Rattus norvegicus
liver/hepato Gene Expression after 24hexposed to24DNT_4.98mg/kgin rat liver
10 GSM489396 RatL24DNT24h_49.8_3 45,220 USACE-ERDC 2009-12-23 [Oligo Array] Agilent-014879 Whole Rat Genome Microarray 4x44K G4131F (Feature Number version) (GPL4135) RNA Rattus norvegicus
Rattus norvegicus
liver/hepato Gene Expression after 24hexposed to24DNT_49.8mg/kgin rat liver
11 GSM489397 RatL24DNT24h_99_2 45,220 USACE-ERDC 2009-12-23 [Oligo Array] Agilent-014879 Whole Rat Genome Microarray 4x44K G4131F (Feature Number version) (GPL4135) RNA Rattus norvegicus
Rattus norvegicus
liver/hepato Gene Expression after 24hexposed to24DNT_99.5mg/kgin rat liver
12 GSM489398 RatL24DNT24h_199_2 45,220 USACE-ERDC 2009-12-23 [Oligo Array] Agilent-014879 Whole Rat Genome Microarray 4x44K G4131F (Feature Number version) (GPL4135) RNA Rattus norvegicus
Rattus norvegicus
liver/hepato Gene Expression after 24hexposed to24DNT_199mg/kgin rat liver
13 GSM489400 RatL24DNT24h_4.98_3 45,220 USACE-ERDC 2009-12-23 [Oligo Array] Agilent-014879 Whole Rat Genome Microarray 4x44K G4131F (Feature Number version) (GPL4135) RNA Rattus norvegicus
Rattus norvegicus
liver/hepato Gene Expression after 24hexposed to24DNT_4.98mg/kgin rat liver
14 GSM489401 RatL24DNT24h_49.8_4 45,220 USACE-ERDC 2009-12-23 [Oligo Array] Agilent-014879 Whole Rat Genome Microarray 4x44K G4131F (Feature Number version) (GPL4135) RNA Rattus norvegicus
Rattus norvegicus
liver/hepato Gene Expression after 24hexposed to24DNT_49.8mg/kgin rat liver
15 GSM489402 RatL24DNT24h_99_3 45,220 USACE-ERDC 2009-12-23 [Oligo Array] Agilent-014879 Whole Rat Genome Microarray 4x44K G4131F (Feature Number version) (GPL4135) RNA Rattus norvegicus
Rattus norvegicus
liver/hepato Gene Expression after 24hexposed to24DNT_99.5mg/kgin rat liver
16 GSM489403 RatL24DNT24h_199_3 45,220 USACE-ERDC 2009-12-23 [Oligo Array] Agilent-014879 Whole Rat Genome Microarray 4x44K G4131F (Feature Number version) (GPL4135) RNA Rattus norvegicus
Rattus norvegicus
liver/hepato Gene Expression after 24hexposed to24DNT_199mg/kgin rat liver
17 GSM489405 RatL24DNT24h_4.98_5 45,220 USACE-ERDC 2009-12-23 [Oligo Array] Agilent-014879 Whole Rat Genome Microarray 4x44K G4131F (Feature Number version) (GPL4135) RNA Rattus norvegicus
Rattus norvegicus
liver/hepato Gene Expression after 24hexposed to24DNT_4.98mg/kgin rat liver
18 GSM489406 RatL24DNT24h_49.8_5 45,220 USACE-ERDC 2009-12-23 [Oligo Array] Agilent-014879 Whole Rat Genome Microarray 4x44K G4131F (Feature Number version) (GPL4135) RNA Rattus norvegicus
Rattus norvegicus
liver/hepato Gene Expression after 24hexposed to24DNT_49.8mg/kgin rat liver
19 GSM489407 RatL24DNT24h_99_5 45,220 USACE-ERDC 2009-12-23 [Oligo Array] Agilent-014879 Whole Rat Genome Microarray 4x44K G4131F (Feature Number version) (GPL4135) RNA Rattus norvegicus
Rattus norvegicus
liver/hepato Gene Expression after 24hexposed to24DNT_99.5mg/kgin rat liver
20 GSM489408 RatL24DNT24h_199_4 45,220 USACE-ERDC 2009-12-23 [Oligo Array] Agilent-014879 Whole Rat Genome Microarray 4x44K G4131F (Feature Number version) (GPL4135) RNA Rattus norvegicus
Rattus norvegicus
liver/hepato Gene Expression after 24hexposed to24DNT_199mg/kgin rat liver
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