Gene Expression Omnibus (GEO) Overview Version:2014-04-12Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(22,139)
  Primates
(288)
  Rodents
(15,364)
  Mammals
(970)
  Vertebrates
(1,364)
  Invertebrates
(4,819)
  Plants
(7,611)
  Bacteria
(3,409)
  Viruses
(59)
  Phages
(8)
  Unclassified
(433)
  All
(56,529)
 
  SAGE NlaIII
(76)
  SAGE RsaI
(1)
  SAGE Sau3A
(10)
  MPSS
(5)
  GeneChip
(7,316)
  Tiling Array
(312)
  cDNA Array
(732)
  Oligo Array
(3,361)
  Bead Array
(1,268)
  Protein Array
(0)
  Antibody
(5)
  RT-PCR
(117)
  HT-Seq
(2,116)
  Other
(45)
  All
(15,364)
 
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Title Platform Institute Submission date Species Data size
(probes x samples)
Sample NCBI
FTP
site
Animal Plant  
brain blood connective reproductive muscular digestive liver lung urinary endo/exo-crine embryo adult aerial structure young aerial structure root meristem/growing tissue flower/sexual organ seed/fruit/grain pooled unclassified
1 In situ synthesis of peptide microarrays - shadow mask design [3] (GSE50571) [Other] 330K random-sequence peptide microarrays (GPL17679) Arizona State University 2013-09-04 Mus musculus
Mus musculus
2,640,272
(330,034 x 8)
8 by_platform
by_series
2 CSMA mouse transcriptome analysis project (GSE8324) [Other] CSMA [DpnII: Mus musculus] signature list (GPL5449) Solexa 2007-06-28 Mus musculus
Mus musculus
1,449,210
(103,515 x 14)
4 2 2 2 4 by_platform
by_series
3 Immunosignatures can predict vaccine efficacy (GSE51623) [Other] CIM10Kv3 (GPL17830) The Biodesign Institute at Arizona State University 2013-10-23 Mus musculus
Mus musculus
1,017,500
(10,175 x 100)
100 by_platform
by_series
4 A Gene Expression Signature for Insulin Resistance (GSE18103) [Other] DUMRU Mouse 12K v1.0 (GPL9191) Deakin University 2009-09-14 Mus musculus
Mus musculus
445,632
(6,963 x 64)
64 by_platform
by_series
5 proteomic survey of lung development and nmyc function in the lung (GSE6108) [Other] lung_development_Nmyc_mouse (GPL4477) University of Toronto 2006-10-23 Mus musculus
Mus musculus
187,013
(3,979 x 47)
47 by_platform
by_series
6 Profiling of antibodies against prostate cancer xenograft-released proteins (GSE16220) [Other] Invitrogen ProtoArray v4 human protein microarray lot HA20085 (GPL8590) Erasmus MC 2009-05-25 Mus musculus
Mus musculus
172,800
(19,200 x 9)
9 by_platform
by_series
7 In situ synthesis of peptide microarrays - shadow mask design [1] (GSE49217) [Other] MASK design peptide microarray (GPL17490) Arizona State University 2013-07-25 Mus musculus
Mus musculus
161,280
(1,536 x 105)
1 104 by_platform
by_series
8 In situ synthesis of peptide microarrays - shadow mask design (GSE50045) [Other] MASK design peptide microarray (GPL17490) Arizona State University 2013-08-20 Mus musculus
Mus musculus
161,280
(1,536 x 105)
1 104 by_platform
by_series
9 In situ synthesis of peptide microarrays - shadow mask design [2] (GSE50044) [Other] 10K immunosignaturing peptide microarray version 2 (GPL17600) Arizona State University 2013-08-20 Mus musculus
Mus musculus
83,200
(10,400 x 8)
8 by_platform
by_series
10 In situ synthesis of peptide microarrays - shadow mask design (GSE50045) [Other] 10K immunosignaturing peptide microarray version 2 (GPL17600) Arizona State University 2013-08-20 Mus musculus
Mus musculus
83,200
(10,400 x 8)
8 by_platform
by_series
11 Characterization of the piRNA Complex from Rat Testes (GSE5026) [Other] piRNA sequences in mouse (GPL3862) Brandeis University 2006-06-08 Mus musculus
Mus musculus
65,535
(65,535 x 1)
1 by_platform
by_series
12 Characterization of the piRNA Complex from Rat Testes (GSE5026) [Other] piRNA sequences in rat (GPL3858) Brandeis University 2006-06-08 Rattus norvegicus
Rattus norvegicus
61,293
(61,293 x 1)
1 by_platform
by_series
13 Deep sequencing-based expression transcriptional profiling of RAW264.7 infected with Brucella 16M (GSE28190) [Other] Jilin University Illumina DGE system (GPL13332) Jilin University 2011-03-25 Mus musculus
Mus musculus
52,809
(17,603 x 3)
3 by_platform
by_series
14 MaPTOL on MmREST (GSE9268) [Other] MaPTOL for REST (GPL5955) The Scripps Research Institute 2007-10-09 Mus musculus
Mus musculus
49,833
(49,833 x 1)
1 by_platform
by_series
15 Identification of a Unique TGF-β Dependent Molecular and Functional Signature in Microglia (GSE48579) [Other] NanoString nCounter Mouse miRNA expression chip (mirBase 15) (GPL17873) Brigham and Women's Hospital, Harvard Medical School 2013-07-08 Mus musculus
Mus musculus
21,708
(603 x 36)
14 7 1 12 2 by_platform
by_series
16 Statistical analysis of differential gene expression relative to a fold change threshold on NanoString data of mouse odorant receptor genes (GSE53876) [Other] NanoString nCounter Analysis System [Gorilla and Century CodeSets] (GPL18144) Max Planck Research Unit for Neurogenetics 2014-01-07 Mus musculus
Mus musculus
16,920
(564 x 30)
30 by_platform
by_series
17 microRNA-135b promotes cancer progression acting as a downstream effector of oncogenic pathways in colon cancer (mouse) (GSE54177) [Other] NanoString nCounter Mouse miRNA expression chip (mirBase 15) (GPL17873) The Ohio State University 2014-01-16 Mus musculus
Mus musculus
14,472
(603 x 24)
24 by_platform
by_series
18 Identification of a Unique TGF-β Dependent Molecular and Functional Signature in Microglia (GSE48579) [Other] NanoString nCounter Mouse Gene Expression Custom Chip_MG400 (GPL17871) Brigham and Women's Hospital, Harvard Medical School 2013-07-08 Mus musculus
Mus musculus
14,000
(400 x 35)
14 6 1 12 2 by_platform
by_series
19 NanoString analysis of a rat liver mRNA panel following TCDD treatment (GSE43251) [Other] NanoString nCounter rat mRNA Custom CodeSet (GPL16444) Ontario Institute for Cancer Research 2013-01-02 Rattus norvegicus
Rattus norvegicus
7,238
(47 x 154)
154 by_platform
by_series
20 Mice with fibrinogen-induced arthritis (FIA) (GSE18073) [Other] Synovial protein array 0.5K v2.0 (GPL9165) Stanford University 2009-09-11 Mus musculus
Mus musculus
7,085
(545 x 13)
5 8 by_platform
by_series
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