Gene Expression Omnibus (GEO) Overview

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DataSet	:	Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample	:	Biological materials.
platform	:	Methods or instruments used for the gene expression profilings.

Human
(17,392)

Primates
(665)

Rodents
(7,771)

Mammals
(399)

Vertebrates
(719)

Invertebrates
(1,567)

Phages
(0)

SAGE RsaI
(0)

SAGE Sau3A
(0)

MPSS
(0)

Protein Array
(0)

Antibody
(0)

RT-PCR
(19)

HT-Seq
(85)

Other
(9)

All
(7,771)

brain
(0)

blood
(0)

connective
(0)

reproductive
(0)

muscular
(7)

digestive
(0)

liver
(0)

lung
(0)

urinary
(0)

endo/exo-crine
(0)

embryo
(4)

adult aerial structure
(0)

young aerial structure
(0)

root
(0)

meristem/growing tissue
(0)

flower/sexual organ
(0)

seed/fruit/grain
(0)

pooled
(0)

unclassified
(8)

all
(19)

	Sample ID	Title	Number of Data	Institute	Submission date	Platform	Sample type	Species	Organ class	Reasoning of the classification Keywords used for the classification are shown with bold font.
1	GSM400513	Day1-RT1-ArrayA	381	UT Health Science Ctr San Antonio	2009-05-06	[RT-PCR] Applied_Biosystems_Taqman_miRNA_Expression Assays_A (Mouse) (GPL8527)	RNA	Mus musculus	unclassified	source_name:Proliferating C2C12 cells title:Day1-RT1-ArrayA description:Standard Taqman Assay: Quantitative real-time PCR was performed using Applied Biosystems 7900HT system and universal cycling conditions (10 min. at 95C; 15 sec. at 95C; 1 min. at 60C for 40 cycles).
2	GSM400676	Day1-RT2-ArrayA	381	UT Health Science Ctr San Antonio	2009-05-07	[RT-PCR] Applied_Biosystems_Taqman_miRNA_Expression Assays_A (Mouse) (GPL8527)	RNA	Mus musculus	unclassified	source_name:Proliferating C2C12 cells title:Day1-RT2-ArrayA description:Standard Taqman Assay: Quantitative real-time PCR was performed using Applied Biosystems 7900HT system and universal cycling conditions (10 min. at 95C; 15 sec. at 95C; 1 min. at 60C for 40 cycles).
3	GSM400677	Day2-RT1-ArrayA	381	UT Health Science Ctr San Antonio	2009-05-07	[RT-PCR] Applied_Biosystems_Taqman_miRNA_Expression Assays_A (Mouse) (GPL8527)	RNA	Mus musculus	unclassified	source_name:Proliferating C2C12 cells title:Day2-RT1-ArrayA description:Standard Taqman Assay: Quantitative real-time PCR was performed using Applied Biosystems 7900HT system and universal cycling conditions (10 min. at 95C; 15 sec. at 95C; 1 min. at 60C for 40 cycles).
4	GSM400678	Day2-RT2-ArrayA	381	UT Health Science Ctr San Antonio	2009-05-07	[RT-PCR] Applied_Biosystems_Taqman_miRNA_Expression Assays_A (Mouse) (GPL8527)	RNA	Mus musculus	unclassified	source_name:Proliferating C2C12 cells title:Day2-RT2-ArrayA description:Standard Taqman Assay: Quantitative real-time PCR was performed using Applied Biosystems 7900HT system and universal cycling conditions (10 min. at 95C; 15 sec. at 95C; 1 min. at 60C for 40 cycles).
5	GSM414898	WT whole embryo 1	381	university of tokyo	2009-06-09	[RT-PCR] Applied_Biosystems_Taqman_miRNA_Expression Assays_A (Mouse) (GPL8527)	RNA	Mus musculus	embryo	WT whole embryo
6	GSM414901	WT whole embryo 2	381	university of tokyo	2009-06-09	[RT-PCR] Applied_Biosystems_Taqman_miRNA_Expression Assays_A (Mouse) (GPL8527)	RNA	Mus musculus	embryo	WT whole embryo
7	GSM414902	ERaKO whole embryo 1	381	university of tokyo	2009-06-09	[RT-PCR] Applied_Biosystems_Taqman_miRNA_Expression Assays_A (Mouse) (GPL8527)	RNA	Mus musculus	embryo	ERalpha KO mice whole embryo
8	GSM414904	ERaKO whole embryo 2	381	university of tokyo	2009-06-09	[RT-PCR] Applied_Biosystems_Taqman_miRNA_Expression Assays_A (Mouse) (GPL8527)	RNA	Mus musculus	embryo	ERalpha KO mice whole embryo
9	GSM413952	Relative miRNA expression_Differentiation day1 vesus day0	231	University of Texas Health Science Center at San Antonio	2009-06-06	[RT-PCR] Applied_Biosystems_Taqman_miRNA_Expression Assays_A (Mouse) (GPL8527)	RNA	Mus musculus	muscle	Primary myogenic progenitor cells (MPC)
10	GSM413953	Relative miRNA expression_Differentiation day2 vesus day0	231	University of Texas Health Science Center at San Antonio	2009-06-06	[RT-PCR] Applied_Biosystems_Taqman_miRNA_Expression Assays_A (Mouse) (GPL8527)	RNA	Mus musculus	muscle	myogenic progenitor cells (MPC)
11	GSM413954	Relative miRNA expression_Differentiation day2 vesus day1	231	University of Texas Health Science Center at San Antonio	2009-06-06	[RT-PCR] Applied_Biosystems_Taqman_miRNA_Expression Assays_A (Mouse) (GPL8527)	RNA	Mus musculus	muscle	myogenic progenitor cells (MPC)
12	GSM413955	Relative miRNA expression_Differentiation day5 vesus day0	231	University of Texas Health Science Center at San Antonio	2009-06-06	[RT-PCR] Applied_Biosystems_Taqman_miRNA_Expression Assays_A (Mouse) (GPL8527)	RNA	Mus musculus	muscle	myogenic progenitor cells (MPC)
13	GSM413956	Relative miRNA expression_Differentiation day5 vesus day1	231	University of Texas Health Science Center at San Antonio	2009-06-06	[RT-PCR] Applied_Biosystems_Taqman_miRNA_Expression Assays_A (Mouse) (GPL8527)	RNA	Mus musculus	muscle	myogenic progenitor cells (MPC)
14	GSM413957	Relative miRNA expression_Differentiation day5 vesus day2	231	University of Texas Health Science Center at San Antonio	2009-06-06	[RT-PCR] Applied_Biosystems_Taqman_miRNA_Expression Assays_A (Mouse) (GPL8527)	RNA	Mus musculus	muscle	myogenic progenitor cells (MPC)
15	GSM413958	Relative miRNA expression_Proliferation day2 vesus day5	231	University of Texas Health Science Center at San Antonio	2009-06-06	[RT-PCR] Applied_Biosystems_Taqman_miRNA_Expression Assays_A (Mouse) (GPL8527)	RNA	Mus musculus	muscle	myogenic progenitor cells (MPC)
16	GSM400510	NonAmp1_ArrayB	216	UT Health Science Ctr San Antonio	2009-05-06	[RT-PCR] Applied_Biosystems_Taqman_miRNA_Expression Assays_B (Mouse) (GPL8526)	RNA	Mus musculus	unclassified	source_name:Proliferating C2C12 cells title:NonAmp1_ArrayB description:Standard Taqman Assay: Quantitative real-time PCR was performed using Applied Biosystems 7900HT system and universal cycling conditions (10 min. at 95C; 15 sec. at 95C; 1 min. at 60C for 40 cycles).
17	GSM400679	Amp1_ArrayB	216	UT Health Science Ctr San Antonio	2009-05-07	[RT-PCR] Applied_Biosystems_Taqman_miRNA_Expression Assays_B (Mouse) (GPL8526)	RNA	Mus musculus	unclassified	source_name:Proliferating C2C12 cells title:Amp1_ArrayB description:Standard Taqman Assay: Quantitative real-time PCR was performed using Applied Biosystems 7900HT system and universal cycling conditions (10 min. at 95C; 15 sec. at 95C; 1 min. at 60C for 40 cycles).
18	GSM400680	NonAmp2_ArrayB	216	UT Health Science Ctr San Antonio	2009-05-07	[RT-PCR] Applied_Biosystems_Taqman_miRNA_Expression Assays_B (Mouse) (GPL8526)	RNA	Mus musculus	unclassified	source_name:Proliferating C2C12 cells title:NonAmp2_ArrayB description:Standard Taqman Assay: Quantitative real-time PCR was performed using Applied Biosystems 7900HT system and universal cycling conditions (10 min. at 95C; 15 sec. at 95C; 1 min. at 60C for 40 cycles).
19	GSM400681	Amp2_ArrayB	216	UT Health Science Ctr San Antonio	2009-05-07	[RT-PCR] Applied_Biosystems_Taqman_miRNA_Expression Assays_B (Mouse) (GPL8526)	RNA	Mus musculus	unclassified	source_name:Proliferating C2C12 cells title:Amp2_ArrayB description:Standard Taqman Assay: Quantitative real-time PCR was performed using Applied Biosystems 7900HT system and universal cycling conditions (10 min. at 95C; 15 sec. at 95C; 1 min. at 60C for 40 cycles).