Gene Expression Omnibus (GEO) Overview Version´╝Ü2014-04-12Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data Unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(17,432)
  Primates
(665)
  Rodents
(7,826)
  Mammals
(399)
  Vertebrates
(731)
  Invertebrates
(1,567)
  Plants
(3,435)
  Bacteria
(998)
  Viruses
(14)
  Phages
(0)
  Unclassified
(76)
  All
(33,163)
 
  SAGE NlaIII
(1)
  SAGE RsaI
(0)
  SAGE Sau3A
(0)
  MPSS
(0)
  GeneChip
(2,864)
  Tiling Array
(48)
  cDNA Array
(80)
  Oligo Array
(4,122)
  Bead Array
(598)
  Protein Array
(0)
  Antibody
(0)
  RT-PCR
(19)
  HT-Seq
(85)
  Other
(9)
  All
(7,826)
 
  brain
(0)
  blood
(0)
  connective
(0)
  reproductive
(0)
  muscular
(7)
  digestive
(0)
  liver
(0)
  lung
(0)
  urinary
(0)
  endo/exo-crine
(0)
  embryo
(4)
  adult aerial structure
(0)
  young aerial structure
(0)
  root
(0)
  meristem/growing tissue
(0)
  flower/sexual organ
(0)
  seed/fruit/grain
(0)
  pooled
(0)
  unclassified
(8)
  all
(19)
 
Sample ID Title Number of Data Institute Submission date Platform Sample type Species Organ class Reasoning of the classification
Keywords used for the classification are shown with bold font.
1 GSM400513 Day1-RT1-ArrayA 381 UT Health Science Ctr San Antonio 2009-05-06 [RT-PCR] Applied_Biosystems_Taqman_miRNA_Expression Assays_A (Mouse) (GPL8527) RNA Mus musculus
Mus musculus
unclassified source_name:Proliferating C2C12 cells title:Day1-RT1-ArrayA description:Standard Taqman Assay: Quantitative real-time PCR was performed using Applied Biosystems 7900HT system and universal cycling conditions (10 min. at 95C; 15 sec. at 95C; 1 min. at 60C for 40 cycles).
2 GSM400676 Day1-RT2-ArrayA 381 UT Health Science Ctr San Antonio 2009-05-07 [RT-PCR] Applied_Biosystems_Taqman_miRNA_Expression Assays_A (Mouse) (GPL8527) RNA Mus musculus
Mus musculus
unclassified source_name:Proliferating C2C12 cells title:Day1-RT2-ArrayA description:Standard Taqman Assay: Quantitative real-time PCR was performed using Applied Biosystems 7900HT system and universal cycling conditions (10 min. at 95C; 15 sec. at 95C; 1 min. at 60C for 40 cycles).
3 GSM400677 Day2-RT1-ArrayA 381 UT Health Science Ctr San Antonio 2009-05-07 [RT-PCR] Applied_Biosystems_Taqman_miRNA_Expression Assays_A (Mouse) (GPL8527) RNA Mus musculus
Mus musculus
unclassified source_name:Proliferating C2C12 cells title:Day2-RT1-ArrayA description:Standard Taqman Assay: Quantitative real-time PCR was performed using Applied Biosystems 7900HT system and universal cycling conditions (10 min. at 95C; 15 sec. at 95C; 1 min. at 60C for 40 cycles).
4 GSM400678 Day2-RT2-ArrayA 381 UT Health Science Ctr San Antonio 2009-05-07 [RT-PCR] Applied_Biosystems_Taqman_miRNA_Expression Assays_A (Mouse) (GPL8527) RNA Mus musculus
Mus musculus
unclassified source_name:Proliferating C2C12 cells title:Day2-RT2-ArrayA description:Standard Taqman Assay: Quantitative real-time PCR was performed using Applied Biosystems 7900HT system and universal cycling conditions (10 min. at 95C; 15 sec. at 95C; 1 min. at 60C for 40 cycles).
5 GSM414898 WT whole embryo 1 381 university of tokyo 2009-06-09 [RT-PCR] Applied_Biosystems_Taqman_miRNA_Expression Assays_A (Mouse) (GPL8527) RNA Mus musculus
Mus musculus
embryo WT whole embryo
6 GSM414901 WT whole embryo 2 381 university of tokyo 2009-06-09 [RT-PCR] Applied_Biosystems_Taqman_miRNA_Expression Assays_A (Mouse) (GPL8527) RNA Mus musculus
Mus musculus
embryo WT whole embryo
7 GSM414902 ERaKO whole embryo 1 381 university of tokyo 2009-06-09 [RT-PCR] Applied_Biosystems_Taqman_miRNA_Expression Assays_A (Mouse) (GPL8527) RNA Mus musculus
Mus musculus
embryo ERalpha KO mice whole embryo
8 GSM414904 ERaKO whole embryo 2 381 university of tokyo 2009-06-09 [RT-PCR] Applied_Biosystems_Taqman_miRNA_Expression Assays_A (Mouse) (GPL8527) RNA Mus musculus
Mus musculus
embryo ERalpha KO mice whole embryo
9 GSM413952 Relative miRNA expression_Differentiation day1 vesus day0 231 University of Texas Health Science Center at San Antonio 2009-06-06 [RT-PCR] Applied_Biosystems_Taqman_miRNA_Expression Assays_A (Mouse) (GPL8527) RNA Mus musculus
Mus musculus
muscle Primary myogenic progenitor cells (MPC)
10 GSM413953 Relative miRNA expression_Differentiation day2 vesus day0 231 University of Texas Health Science Center at San Antonio 2009-06-06 [RT-PCR] Applied_Biosystems_Taqman_miRNA_Expression Assays_A (Mouse) (GPL8527) RNA Mus musculus
Mus musculus
muscle myogenic progenitor cells (MPC)
11 GSM413954 Relative miRNA expression_Differentiation day2 vesus day1 231 University of Texas Health Science Center at San Antonio 2009-06-06 [RT-PCR] Applied_Biosystems_Taqman_miRNA_Expression Assays_A (Mouse) (GPL8527) RNA Mus musculus
Mus musculus
muscle myogenic progenitor cells (MPC)
12 GSM413955 Relative miRNA expression_Differentiation day5 vesus day0 231 University of Texas Health Science Center at San Antonio 2009-06-06 [RT-PCR] Applied_Biosystems_Taqman_miRNA_Expression Assays_A (Mouse) (GPL8527) RNA Mus musculus
Mus musculus
muscle myogenic progenitor cells (MPC)
13 GSM413956 Relative miRNA expression_Differentiation day5 vesus day1 231 University of Texas Health Science Center at San Antonio 2009-06-06 [RT-PCR] Applied_Biosystems_Taqman_miRNA_Expression Assays_A (Mouse) (GPL8527) RNA Mus musculus
Mus musculus
muscle myogenic progenitor cells (MPC)
14 GSM413957 Relative miRNA expression_Differentiation day5 vesus day2 231 University of Texas Health Science Center at San Antonio 2009-06-06 [RT-PCR] Applied_Biosystems_Taqman_miRNA_Expression Assays_A (Mouse) (GPL8527) RNA Mus musculus
Mus musculus
muscle myogenic progenitor cells (MPC)
15 GSM413958 Relative miRNA expression_Proliferation day2 vesus day5 231 University of Texas Health Science Center at San Antonio 2009-06-06 [RT-PCR] Applied_Biosystems_Taqman_miRNA_Expression Assays_A (Mouse) (GPL8527) RNA Mus musculus
Mus musculus
muscle myogenic progenitor cells (MPC)
16 GSM400510 NonAmp1_ArrayB 216 UT Health Science Ctr San Antonio 2009-05-06 [RT-PCR] Applied_Biosystems_Taqman_miRNA_Expression Assays_B (Mouse) (GPL8526) RNA Mus musculus
Mus musculus
unclassified source_name:Proliferating C2C12 cells title:NonAmp1_ArrayB description:Standard Taqman Assay: Quantitative real-time PCR was performed using Applied Biosystems 7900HT system and universal cycling conditions (10 min. at 95C; 15 sec. at 95C; 1 min. at 60C for 40 cycles).
17 GSM400679 Amp1_ArrayB 216 UT Health Science Ctr San Antonio 2009-05-07 [RT-PCR] Applied_Biosystems_Taqman_miRNA_Expression Assays_B (Mouse) (GPL8526) RNA Mus musculus
Mus musculus
unclassified source_name:Proliferating C2C12 cells title:Amp1_ArrayB description:Standard Taqman Assay: Quantitative real-time PCR was performed using Applied Biosystems 7900HT system and universal cycling conditions (10 min. at 95C; 15 sec. at 95C; 1 min. at 60C for 40 cycles).
18 GSM400680 NonAmp2_ArrayB 216 UT Health Science Ctr San Antonio 2009-05-07 [RT-PCR] Applied_Biosystems_Taqman_miRNA_Expression Assays_B (Mouse) (GPL8526) RNA Mus musculus
Mus musculus
unclassified source_name:Proliferating C2C12 cells title:NonAmp2_ArrayB description:Standard Taqman Assay: Quantitative real-time PCR was performed using Applied Biosystems 7900HT system and universal cycling conditions (10 min. at 95C; 15 sec. at 95C; 1 min. at 60C for 40 cycles).
19 GSM400681 Amp2_ArrayB 216 UT Health Science Ctr San Antonio 2009-05-07 [RT-PCR] Applied_Biosystems_Taqman_miRNA_Expression Assays_B (Mouse) (GPL8526) RNA Mus musculus
Mus musculus
unclassified source_name:Proliferating C2C12 cells title:Amp2_ArrayB description:Standard Taqman Assay: Quantitative real-time PCR was performed using Applied Biosystems 7900HT system and universal cycling conditions (10 min. at 95C; 15 sec. at 95C; 1 min. at 60C for 40 cycles).