Gene Expression Omnibus (GEO) Overview Version:2014-04-12Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data Unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(28,971)
  Primates
(89)
  Rodents
(7,954)
  Mammals
(744)
  Vertebrates
(774)
  Invertebrates
(2,181)
  Plants
(2,767)
  Bacteria
(1,374)
  Viruses
(236)
  Phages
(0)
  Unclassified
(665)
  All
(45,839)
 
  SAGE NlaIII
(0)
  SAGE RsaI
(0)
  SAGE Sau3A
(0)
  MPSS
(0)
  GeneChip
(3,832)
  Tiling Array
(212)
  cDNA Array
(35)
  Oligo Array
(1,979)
  Bead Array
(1,413)
  Protein Array
(0)
  Antibody
(0)
  RT-PCR
(96)
  HT-Seq
(375)
  Other
(12)
  All
(7,954)
 
  brain
(6)
  blood
(48)
  connective
(0)
  reproductive
(0)
  muscular
(28)
  digestive
(0)
  liver
(0)
  lung
(0)
  urinary
(0)
  endo/exo-crine
(0)
  embryo
(0)
  adult aerial structure
(0)
  young aerial structure
(0)
  root
(0)
  meristem/growing tissue
(0)
  flower/sexual organ
(0)
  seed/fruit/grain
(0)
  pooled
(4)
  unclassified
(10)
  all
(96)
 
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Sample ID Title Number of Data Institute Submission date Platform Sample type Species Organ class Reasoning of the classification
Keywords used for the classification are shown with bold font.
1 GSM662748 Peptide vs naïve expt 1 778 Imperial College London 2011-01-27 [RT-PCR] Mouse Immunology 384 StellARray™ qPCR Array plates (# 00188202) (GPL11665) RNA Mus musculus
Mus musculus
lymphnode TCR transgenic CD4 T cells, naïve TCR transgenic CD4 T cells, from adoptive transfer peptide treated mice
2 GSM662749 Peptide vs naïve expt 2 778 Imperial College London 2011-01-27 [RT-PCR] Mouse Immunology 384 StellARray™ qPCR Array plates (# 00188202) (GPL11665) RNA Mus musculus
Mus musculus
lymphnode TCR transgenic CD4 T cells, naïve TCR transgenic CD4 T cells, from adoptive transfer peptide treated mice
3 GSM662750 Peptide+LPS vs naïve expt 1 778 Imperial College London 2011-01-27 [RT-PCR] Mouse Immunology 384 StellARray™ qPCR Array plates (# 00188202) (GPL11665) RNA Mus musculus
Mus musculus
lymphnode TCR transgenic CD4 T cells, naïve TCR transgenic CD4 T cells, from adoptive transfer peptide+LPS treated mice
4 GSM662751 Peptide+LPS vs naïve expt 2 778 Imperial College London 2011-01-27 [RT-PCR] Mouse Immunology 384 StellARray™ qPCR Array plates (# 00188202) (GPL11665) RNA Mus musculus
Mus musculus
lymphnode TCR transgenic CD4 T cells, naïve TCR transgenic CD4 T cells, from adoptive transfer peptide+LPS treated mice
5 GSM662752 Peptide+LPS vs naïve expt 3 778 Imperial College London 2011-01-27 [RT-PCR] Mouse Immunology 384 StellARray™ qPCR Array plates (# 00188202) (GPL11665) RNA Mus musculus
Mus musculus
lymphnode TCR transgenic CD4 T cells, naïve TCR transgenic CD4 T cells, from adoptive transfer peptide+LPS treated mice
6 GSM662753 CD8 tolerant vs naive 778 Imperial College London 2011-01-27 [RT-PCR] Mouse Immunology 384 StellARrayâ„¢ qPCR Array plates (# 00188202) (GPL11665) RNA Mus musculus
Mus musculus
lymphnode CD8 T cells, naïve CD8 T cells, HY tetramer positive from tolerant mice
7 GSM662754 CD8 rejecting vs naive 778 Imperial College London 2011-01-27 [RT-PCR] Mouse Immunology 384 StellARrayâ„¢ qPCR Array plates (# 00188202) (GPL11665) RNA Mus musculus
Mus musculus
lymphnode CD8 T cells, naïve CD8 T cells, HY tetramer positive from rejecting mice
8 GSM652889 Control untreated Aorta Replicate 1 519 Ludwig-Maximilians-University 2011-01-11 [RT-PCR] Applied Biosystems Taqman miRNA Expression Assays A and B (GPL11419) RNA Mus musculus
Mus musculus
artery/aorta Mouse Aorta
9 GSM652890 Control untreated Aorta Replicate 2 519 Ludwig-Maximilians-University 2011-01-11 [RT-PCR] Applied Biosystems Taqman miRNA Expression Assays A and B (GPL11419) RNA Mus musculus
Mus musculus
artery/aorta Mouse Aorta
10 GSM652891 Control untreated Aorta Replicate 3 519 Ludwig-Maximilians-University 2011-01-11 [RT-PCR] Applied Biosystems Taqman miRNA Expression Assays A and B (GPL11419) RNA Mus musculus
Mus musculus
artery/aorta Mouse Aorta
11 GSM652892 Control untreated Aorta Replicate 4 519 Ludwig-Maximilians-University 2011-01-11 [RT-PCR] Applied Biosystems Taqman miRNA Expression Assays A and B (GPL11419) RNA Mus musculus
Mus musculus
artery/aorta Mouse Aorta
12 GSM652893 M1-type bone marrow derived macrophage Replicate 1 519 Ludwig-Maximilians-University 2011-01-11 [RT-PCR] Applied Biosystems Taqman miRNA Expression Assays A and B (GPL11419) RNA Mus musculus
Mus musculus
bone marrow Mouse bone marrow cells
13 GSM652894 M1-type bone marrow derived macrophage Replicate 2 519 Ludwig-Maximilians-University 2011-01-11 [RT-PCR] Applied Biosystems Taqman miRNA Expression Assays A and B (GPL11419) RNA Mus musculus
Mus musculus
bone marrow Mouse bone marrow cells
14 GSM652895 M1-type bone marrow derived macrophage Replicate 3 519 Ludwig-Maximilians-University 2011-01-11 [RT-PCR] Applied Biosystems Taqman miRNA Expression Assays A and B (GPL11419) RNA Mus musculus
Mus musculus
bone marrow Mouse bone marrow cells
15 GSM652896 Control Normal Diet Replicate 1 519 Ludwig-Maximilians-University 2011-01-11 [RT-PCR] Applied Biosystems Taqman miRNA Expression Assays A and B (GPL11419) RNA Mus musculus
Mus musculus
artery/aorta Mouse Aorta
16 GSM652897 Control Normal Diet Replicate 2 519 Ludwig-Maximilians-University 2011-01-11 [RT-PCR] Applied Biosystems Taqman miRNA Expression Assays A and B (GPL11419) RNA Mus musculus
Mus musculus
artery/aorta Mouse Aorta
17 GSM652898 Control Normal Diet Replicate 3 519 Ludwig-Maximilians-University 2011-01-11 [RT-PCR] Applied Biosystems Taqman miRNA Expression Assays A and B (GPL11419) RNA Mus musculus
Mus musculus
artery/aorta Mouse Aorta
18 GSM652899 Control Normal Diet Replicate 4 519 Ludwig-Maximilians-University 2011-01-11 [RT-PCR] Applied Biosystems Taqman miRNA Expression Assays A and B (GPL11419) RNA Mus musculus
Mus musculus
artery/aorta Mouse Aorta
19 GSM652900 3 months of High Fat Diet Replicate 1 519 Ludwig-Maximilians-University 2011-01-11 [RT-PCR] Applied Biosystems Taqman miRNA Expression Assays A and B (GPL11419) RNA Mus musculus
Mus musculus
artery/aorta Mouse Aorta
20 GSM652901 3 months of High Fat Diet Replicate 2 519 Ludwig-Maximilians-University 2011-01-11 [RT-PCR] Applied Biosystems Taqman miRNA Expression Assays A and B (GPL11419) RNA Mus musculus
Mus musculus
artery/aorta Mouse Aorta
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