Gene Expression Omnibus (GEO) Overview Version：2013-04-06Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data Unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(502,421)		   Primates
(4,928)		   Rodents
(181,106)		   Mammals
(16,260)		   Vertebrates
(18,263)		   Invertebrates
(37,338)		   Plants
(91,454)		   Bacteria
(39,082)		   Viruses
(1,266)		   Phages
(101)		   Unclassified
(5,242)		   All
(898,944)		  
  SAGE NlaIII
(718)		   SAGE RsaI
(3)		   SAGE Sau3A
(37)		   MPSS
(100)		   GeneChip
(89,973)		   Tiling Array
(2,000)		   cDNA Array
(11,116)		   Oligo Array
(53,181)		   Bead Array
(13,914)		   Protein Array
(0)		   Antibody
(22)		   RT-PCR
(885)		   HT-Seq
(8,762)		   Other
(395)		   All
(181,106)		  
  brain
(221)		   blood
(81)		   connective
(35)		   reproductive
(45)		   muscular
(44)		   digestive
(24)		   liver
(12)		   lung
(24)		   urinary
(31)		   endo/exo-crine
(76)		   embryo
(78)		   adult aerial structure
(0)		   young aerial structure
(0)		   root
(0)		   meristem/growing tissue
(0)		   flower/sexual organ
(0)		   seed/fruit/grain
(0)		   pooled
(25)		   unclassified
(22)		   all
(718)		  
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Sample ID Title Number of Data Institute Submission date Platform Sample type Species Organ class Reasoning of the classification
Keywords used for the classification are shown with bold font.
1 GSM5050 P10 cerebellum 370 The Ohio State University 2003-03-24 [SAGE NlaIII] SAGE:10:NlaIII:Mus musculus (GPL11) SAGE Mus musculus
Mus musculus		 cerebellum cerebellum of P10 mouse; wild type littermate to lurcher
2 GSM5051 P10 Lurcher Cerebellum 668 The Ohio State University 2003-03-24 [SAGE NlaIII] SAGE:10:NlaIII:Mus musculus (GPL11) SAGE Mus musculus
Mus musculus		 cerebellum cerebellum of P10 mouse
3 GSM24257 UN-chronic exposure 969 INSERM 2004-05-27 [SAGE NlaIII] SAGE:10:NlaIII:Mus musculus (GPL11) SAGE Mus musculus
Mus musculus		 kidney kidney mouse
4 GSM24256 normal kidney 1,246 INSERM 2004-05-27 [SAGE NlaIII] SAGE:10:NlaIII:Mus musculus (GPL11) SAGE Mus musculus
Mus musculus		 kidney control mouse kidney
5 GSM24251 control Kidney 1,938 INSERM 2004-05-27 [SAGE NlaIII] SAGE:10:NlaIII:Mus musculus (GPL11) SAGE Mus musculus
Mus musculus		 kidney control mouse Kidney
6 GSM24255 UN-acute exposure 2,188 INSERM 2004-05-27 [SAGE NlaIII] SAGE:10:NlaIII:Mus musculus (GPL11) SAGE Mus musculus
Mus musculus		 kidney kidney mouse
7 GSM344585 SAGE_sympathetic neuron axons 2,389 University College London 2008-11-21 [SAGE NlaIII] SAGE:17:NlaIII:Rattus norvegicus (GPL5330) SAGE Rattus norvegicus
Rattus norvegicus		 cerebrum Axon mRNA from 12 DIV sympathetic neurons
8 GSM12513 P840 cerebellum 3,714 The Ohio State Universiy 2003-10-28 [SAGE NlaIII] SAGE:10:NlaIII:Mus musculus (GPL11) SAGE Mus musculus
Mus musculus		 cerebellum P840 C57BL6/J mouse cerebellum
9 GSM3687 Skin graft draining nodes (CBA) 4,048 University of Oxford 2003-01-16 [SAGE NlaIII] SAGE:10:NlaIII:Mus musculus (GPL11) SAGE Mus musculus
Mus musculus		 pooled Normal CBA/Ca Lymph nodes draining B10.BR skin graft
10 GSM128917 minusDRB_mouse_COC_cultured_25min_(no transcriptional_inhibitor) 4,819 North Carolina State University 2006-08-15 [SAGE NlaIII] SAGE:10:NlaIII:Mus musculus (GPL11) SAGE Mus musculus
Mus musculus		 ovary minusDRB SAGE library used to compare with plusDRB SAGE library. See following reference: Rodriguez et al., 2006. Identification of candidate mRNAs associated with gonadotropin-induced maturation of murine cumulus oocyte complexes using serial analysis of gene expression. Physiological Genomics (in press).
11 GSM61483 P300 Ethanol treated mouse cerebellum 4,850 The Ohio State Universiy 2005-06-16 [SAGE NlaIII] SAGE:10:NlaIII:Mus musculus (GPL11) SAGE Mus musculus
Mus musculus		 cerebellum P300 C57BL6/J male mouse cerebellum
12 GSM3837 Splenic B cells (mouse) 4,942 University of Oxford 2003-02-04 [SAGE NlaIII] SAGE:10:NlaIII:Mus musculus (GPL11) SAGE Mus musculus
Mus musculus		 lymphnode Mouse splenic B cells (unstimulated)
13 GSM16635 P810 cerebellum #2 4,987 The Ohio State Universiy 2004-02-06 [SAGE NlaIII] SAGE:10:NlaIII:Mus musculus (GPL11) SAGE Mus musculus
Mus musculus		 cerebellum P810 C57BL6/J male mouse cerebellum
14 GSM128919 plusDRB_mouse_COC_cultured_25min_(with_transcriptional_inhibitor) 5,024 North Carolina State University 2006-08-15 [SAGE NlaIII] SAGE:10:NlaIII:Mus musculus (GPL11) SAGE Mus musculus
Mus musculus		 ovary plusDRB (treatment) SAGE library used to compare with minusDRB (control) SAGE library. See following reference: Rodriguez et al., 2006. Identification of candidate mRNAs associated with gonadotropin-induced maturation of murine cumulus oocyte complexes using serial analysis of gene expression. Physiological Genomics (in press).
15 GSM12533 rat hippocampus: status epilepticus group 5,040 Leiden University 2003-10-30 [SAGE NlaIII] SAGE:10:NlaIII:Rattus norvegicus (GPL23) SAGE Rattus norvegicus
Rattus norvegicus		 cerebrum rat hippocampus (Sprague Dawley)
16 GSM3681 Treg clone Tr1D1 pure 5,044 University of Oxford 2003-01-15 [SAGE NlaIII] SAGE:10:NlaIII:Mus musculus (GPL11) SAGE Mus musculus
Mus musculus		 lymphnode CD4+ Tr1-like clone H-Y specific (resting)
17 GSM3826 Th2 clone R2.4(CD3 activated) 5,503 University of Oxford 2003-02-04 [SAGE NlaIII] SAGE:10:NlaIII:Mus musculus (GPL11) SAGE Mus musculus
Mus musculus		 pooled CD4+ Th2 clone (R2.4): overnight with anti-CD3
18 GSM9194 FSCHW_CONTROL 5,577 Boston University School of Medicine 2003-08-21 [SAGE NlaIII] SAGE:10:NlaIII:Mus musculus (GPL11) SAGE Mus musculus
Mus musculus		 kidney whole kidney
19 GSM12757 mouse liver: apoE3L transgenics 5,687 Leiden University 2003-11-06 [SAGE NlaIII] SAGE:10:NlaIII:Mus musculus (GPL11) SAGE Mus musculus
Mus musculus		 liver/hepato mouse liver
20 GSM9195 FSCHW_ANGII7DK 5,719 Boston University School of Medicine 2003-08-21 [SAGE NlaIII] SAGE:10:NlaIII:Mus musculus (GPL11) SAGE Mus musculus
Mus musculus		 kidney whole kidney
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