Gene Expression Omnibus (GEO) Overview Version:2013-04-06Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.

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Data Unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(502,421)
  Primates
(4,928)
  Rodents
(181,106)
  Mammals
(16,260)
  Vertebrates
(18,263)
  Invertebrates
(37,338)
  Plants
(91,454)
  Bacteria
(39,082)
  Viruses
(1,266)
  Phages
(101)
  Unclassified
(5,242)
  All
(898,944)
 
  SAGE NlaIII
(718)
  SAGE RsaI
(3)
  SAGE Sau3A
(37)
  MPSS
(100)
  GeneChip
(89,973)
  Tiling Array
(2,000)
  cDNA Array
(11,116)
  Oligo Array
(53,181)
  Bead Array
(13,914)
  Protein Array
(0)
  Antibody
(22)
  RT-PCR
(885)
  HT-Seq
(8,762)
  Other
(395)
  All
(181,106)
 
  brain
(221)
  blood
(81)
  connective
(35)
  reproductive
(45)
  muscular
(44)
  digestive
(24)
  liver
(12)
  lung
(24)
  urinary
(31)
  endo/exo-crine
(76)
  embryo
(78)
  adult aerial structure
(0)
  young aerial structure
(0)
  root
(0)
  meristem/growing tissue
(0)
  flower/sexual organ
(0)
  seed/fruit/grain
(0)
  pooled
(25)
  unclassified
(22)
  all
(718)
 
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Sample ID Title Number of Data Institute Submission date Platform Sample type Species Organ class Reasoning of the classification
Keywords used for the classification are shown with bold font.
1 GSM106656 mLSAGE_Kidney_normal_P84_MMD_SM104 99,439 Canada's Michael Smith Genome Sciences Centre 2006-04-25 [SAGE NlaIII] SAGE:17:NlaIII:Mus musculus (GPL1349) SAGE Mus musculus
Mus musculus
kidney Kidney, normal
2 GSM384287 mSAGE_Kidney_normal_P84_MMD_SM104 95,734 National Cancer Institute 2009-03-19 [SAGE NlaIII] SAGE:10:NlaIII:Mus musculus (GPL11) SAGE Mus musculus
Mus musculus
kidney kidney, normal, microscope dissected, extracted short sage, 84 days post natal
3 GSM207535 mLSAGE Endoderm normal Theiler Stage 12 MMD SM247 88,598 Canada's Michael Smith Genome Sciences Centre 2007-07-04 [SAGE NlaIII] SAGE:17:NlaIII:Mus musculus (GPL1349) SAGE Mus musculus
Mus musculus
unclassified source_name:Mouse definitive endoderm TS12 title:mLSAGE Endoderm normal Theiler Stage 12 MMD SM247 description:Developmental Stage = Theiler Stage 12 This library is of the MORGEN project.
4 GSM207536 mLSAGE Endoderm normal Theiler Stage 13 MMD SM248 88,146 Canada's Michael Smith Genome Sciences Centre 2007-07-04 [SAGE NlaIII] SAGE:17:NlaIII:Mus musculus (GPL1349) SAGE Mus musculus
Mus musculus
unclassified source_name:Mouse Endoderm Hindgut TS13 title:mLSAGE Endoderm normal Theiler Stage 13 MMD SM248 description:Developmental Stage = Theiler Stage 13 This library is of the MORGEN project.
5 GSM207530 mLSAGE Heart normal Theiler Stage 19 MMD SM241 82,704 Canada's Michael Smith Genome Sciences Centre 2007-07-04 [SAGE NlaIII] SAGE:17:NlaIII:Mus musculus (GPL1349) SAGE Mus musculus
Mus musculus
heart Mouse Heart AV Canal TS19
6 GSM207368 mLSAGE Pancreas normal Theiler Stage 19 MMD SM231 82,083 Canada's Michael Smith Genome Sciences Centre 2007-07-03 [SAGE NlaIII] SAGE:17:NlaIII:Mus musculus (GPL1349) SAGE Mus musculus
Mus musculus
pancreas Mouse Pancreas TS19
7 GSM207537 mLSAGE Pancreas normal Theiler Stage 21 MMD SM249 80,460 Canada's Michael Smith Genome Sciences Centre 2007-07-04 [SAGE NlaIII] SAGE:17:NlaIII:Mus musculus (GPL1349) SAGE Mus musculus
Mus musculus
pancreas Mouse Pancreas TS21
8 GSM207531 mLSAGE Pancreas normal Theiler Stage 20 MMD SM243 76,287 Canada's Michael Smith Genome Sciences Centre 2007-07-04 [SAGE NlaIII] SAGE:17:NlaIII:Mus musculus (GPL1349) SAGE Mus musculus
Mus musculus
pancreas Mouse Pancreas TS20 N3N3-GFP+
9 GSM207370 mLSAGE Heart normal Theiler Stage 17 MMD SM234 75,375 Canada's Michael Smith Genome Sciences Centre 2007-07-03 [SAGE NlaIII] SAGE:17:NlaIII:Mus musculus (GPL1349) SAGE Mus musculus
Mus musculus
heart Mouse Heart TS17
10 GSM207532 mLSAGE Pancreas normal Theiler Stage 17 MMD SM244 74,348 Canada's Michael Smith Genome Sciences Centre 2007-07-04 [SAGE NlaIII] SAGE:17:NlaIII:Mus musculus (GPL1349) SAGE Mus musculus
Mus musculus
pancreas Mouse Pancreas TS17 PDX1-GFP+
11 GSM207533 mLSAGE Pancreas normal Theiler Stage 20 MMD SM245 73,221 Canada's Michael Smith Genome Sciences Centre 2007-07-04 [SAGE NlaIII] SAGE:17:NlaIII:Mus musculus (GPL1349) SAGE Mus musculus
Mus musculus
pancreas Mouse Pancreas TS20 N3N3-GFP-
12 GSM207373 mLSAGE Heart normal Theiler Stage 20 MMD SM238 71,385 Canada's Michael Smith Genome Sciences Centre 2007-07-03 [SAGE NlaIII] SAGE:17:NlaIII:Mus musculus (GPL1349) SAGE Mus musculus
Mus musculus
heart Mouse Heart AV Canal TS20
13 GSM207371 mLSAGE Heart normal Theiler Stage 17 MMD SM235 68,453 Canada's Michael Smith Genome Sciences Centre 2007-07-03 [SAGE NlaIII] SAGE:17:NlaIII:Mus musculus (GPL1349) SAGE Mus musculus
Mus musculus
heart Mouse Heart AV Canal TS17
14 GSM207534 mLSAGE Heart normal Theiler Stage 15 MMD SM246 65,103 Canada's Michael Smith Genome Sciences Centre 2007-07-04 [SAGE NlaIII] SAGE:17:NlaIII:Mus musculus (GPL1349) SAGE Mus musculus
Mus musculus
heart Mouse Heart AV Canal TS15
15 GSM207369 mLSAGE Pancreas normal Theiler Stage 22 MMD SM232 63,461 Canada's Michael Smith Genome Sciences Centre 2007-07-03 [SAGE NlaIII] SAGE:17:NlaIII:Mus musculus (GPL1349) SAGE Mus musculus
Mus musculus
pancreas Mouse Pancreas TS22
16 GSM207372 mLSAGE Heart normal Theiler Stage 15 MMD SM236 62,263 Canada's Michael Smith Genome Sciences Centre 2007-07-03 [SAGE NlaIII] SAGE:17:NlaIII:Mus musculus (GPL1349) SAGE Mus musculus
Mus musculus
heart Mouse Heart TS15
17 GSM137116 SAGE_uterus_intact female mice 58,565 Laval University 2006-09-21 [SAGE NlaIII] SAGE:10:NlaIII:Mus musculus (GPL11) SAGE Mus musculus
Mus musculus
uterus uterus
18 GSM384641 mLSAGE Vascular endothelium 48hr regenerating liver associated AP 48hrRLiEC 58,002 National Cancer Institute 2009-03-19 [SAGE NlaIII] SAGE:17:NlaIII:Mus musculus (GPL1349) SAGE Mus musculus
Mus musculus
vein vascular, normal, endothelium, antibody purified, long sage, adult
19 GSM38890 SAGE_hypothalamus_intact female mice 57,914 Penn State College of Medicine 2005-01-13 [SAGE NlaIII] SAGE:10:NlaIII:Mus musculus (GPL11) SAGE Mus musculus
Mus musculus
cerebrum hypothalamus
20 GSM38894 SAGE_cortex_intact female mice 56,784 Penn State College of Medicine 2005-01-13 [SAGE NlaIII] SAGE:10:NlaIII:Mus musculus (GPL11) SAGE Mus musculus
Mus musculus
cerebrum parietal cortex
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