Gene Expression Omnibus (GEO) Overview Version:2013-04-06Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.

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Data unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(17,885)
  Primates
(199)
  Rodents
(12,016)
  Mammals
(754)
  Vertebrates
(1,115)
  Invertebrates
(3,796)
  Plants
(6,479)
  Bacteria
(2,920)
  Viruses
(51)
  Phages
(4)
  Unclassified
(249)
  All
(45,516)
 
  SAGE NlaIII
(76)
  SAGE RsaI
(1)
  SAGE Sau3A
(10)
  MPSS
(5)
  GeneChip
(0)
  Tiling Array
(0)
  cDNA Array
(717)
  Oligo Array
(0)
  Bead Array
(888)
  Protein Array
(0)
  Antibody
(3)
  RT-PCR
(82)
  HT-Seq
(1,149)
  Other
(30)
  All
(12,016)
 
Title Platform Institute Submission date Species Data size
(probes x samples)
Sample NCBI
FTP
site
Animal Plant  
brain blood connective reproductive muscular digestive liver lung urinary endo/exo-crine embryo adult aerial structure young aerial structure root meristem/growing tissue flower/sexual organ seed/fruit/grain pooled unclassified
1 Global transcriptional activity in pluripotent embryonic stem cells. (GSE10834) [Tiling Array] Affymetrix non-commercial Mouse Tiling 1.0 Array 16 (GPL6628) Affymetrix, Inc. 2008-03-14 Mus musculus
Mus musculus
55,759,416
(13,939,854 x 4)
4 by_platform
by_series
2 aCGH data from mouse APL tumors (GSE26130) [Tiling Array] NimbleGen Mouse CGH Whole-Genome Tiling Array [080411_MM9_CGH_HX1] (GPL11368) Washington University in St.Louis 2010-12-16 Mus musculus
Mus musculus
33,447,520
(2,090,470 x 16)
16 by_platform
by_series
3 Conserved progression mutations revealed by sequencing a mouse acute promyelocytic leukemia genome (GSE26131) [Tiling Array] NimbleGen Mouse CGH Whole-Genome Tiling Array [080411_MM9_CGH_HX1] (GPL11368) Washington University in St.Louis 2010-12-16 Mus musculus
Mus musculus
33,447,520
(2,090,470 x 16)
16 by_platform
by_series
4 Phenobarbital mediates an epigenetic switch at the constitutive androstane receptor (CAR) target gene Cyp2b10 in the liver of B6C3F1 mice [MeDIP array]. (GSE34462) [Tiling Array] NimbleGen MM8 Mouse Promoter plus CpG Island 374K Tiling Array (GPL7060) Novartis Pharma 2011-12-15 Mus musculus
Mus musculus
29,894,640
(373,683 x 80)
40 40 by_platform
by_series
5 Phenobarbital mediates an epigenetic switch at the constitutive androstane receptor (CAR) target gene Cyp2b10 in the liver of B6C3F1 mice. (GSE34463) [Tiling Array] NimbleGen MM8 Mouse Promoter plus CpG Island 374K Tiling Array (GPL7060) Novartis Pharma 2011-12-15 Mus musculus
Mus musculus
29,894,640
(373,683 x 80)
40 40 by_platform
by_series
6 Recurrent DNA copy number variation in the laboratory mouse (GSE8885) [Tiling Array] tiling-mouse-385K-v1.0 (GPL5777) Cold Spring Harbor Laboratory 2007-08-27 Mus musculus
Mus musculus
26,194,484
(385,213 x 68)
53 15 by_platform
by_series
7 Copy number variation in inbred and wild mice (GSE24424) [Tiling Array] MM6 385K Whole Genome Tiling array (GPL10992) University of Lausanne 2010-09-28 Mus musculus
Mus musculus
24,854,528
(388,352 x 64)
64 by_platform
by_series
8 Validation and copy number variation in inbred and wild mice (GSE24643) [Tiling Array] MM6 385K Whole Genome Tiling array (GPL10992) University of Lausanne 2010-10-12 Mus musculus
Mus musculus
24,854,528
(388,352 x 64)
64 by_platform
by_series
9 Mammalian X upregulation (GSE30761) [Tiling Array] NimbleGen Mus musculus 2.1M 2007-09-21_MM8_Deluxe_Promoter_HX1 tiling design (GPL16733) University of Washington 2011-07-18 Mus musculus
Mus musculus
23,518,253
(2,138,023 x 11)
11 by_platform
by_series
10 Upregulation of the mammalian X chromosome is associated with enhanced transcription initiation, MOF-mediated H4K16 acetylation, and longer RNA half-life (GSE44835) [Tiling Array] NimbleGen Mus musculus 2.1M 2007-09-21_MM8_Deluxe_Promoter_HX1 tiling design (GPL16733) University of Washington 2013-03-04 Mus musculus
Mus musculus
23,518,253
(2,138,023 x 11)
11 by_platform
by_series
11 Changes in H2A.Z occupancy and DNA methylation during B-cell lymphomagenesis (GSE19884) [Tiling Array] NimbleGen Mus musculus 2.1M 2007-09-21_MM8_Deluxe_Promoter_HX1 tiling design (GPL9833) Fred Hutchinson Cancer Research Center 2010-01-13 Mus musculus
Mus musculus
23,512,544
(2,137,504 x 11)
11 by_platform
by_series
12 Dynamics of 5-hydroxymethylcytosine and chromatin marks in mammalian neurogenesis (GSE38118) [Tiling Array] NimbleGen Mouse DNA Methylation 2.1M Economy Whole-Genome Tiling Arrays (1/4) (GPL15588) City of Hope National Medical Center 2012-05-22 Mus musculus
Mus musculus
21,784,470
(2,178,447 x 10)
10 by_platform
by_series
13 Dynamics of 5-hydroxymethylcytosine and chromatin marks in mammalian neurogenesis (GSE38118) [Tiling Array] NimbleGen Mouse DNA Methylation 2.1M Economy Whole-Genome Tiling Arrays (2/4) (GPL15589) City of Hope National Medical Center 2012-05-22 Mus musculus
Mus musculus
21,784,470
(2,178,447 x 10)
10 by_platform
by_series
14 Dynamics of 5-hydroxymethylcytosine and chromatin marks in mammalian neurogenesis (GSE38118) [Tiling Array] NimbleGen Mouse DNA Methylation 2.1M Economy Whole-Genome Tiling Arrays (3/4) (GPL15590) City of Hope National Medical Center 2012-05-22 Mus musculus
Mus musculus
21,784,470
(2,178,447 x 10)
10 by_platform
by_series
15 Dynamics of 5-hydroxymethylcytosine and chromatin marks in mammalian neurogenesis (GSE38118) [Tiling Array] NimbleGen Mouse DNA Methylation 2.1M Economy Whole-Genome Tiling Arrays (4/4) (GPL15591) City of Hope National Medical Center 2012-05-22 Mus musculus
Mus musculus
21,784,310
(2,178,431 x 10)
10 by_platform
by_series
16 Mammalian X upregulation (GSE30761) [Tiling Array] NimbleGen Mouse 2.1 M array 10 of 10 (GPL10129) University of Washington 2011-07-18 Mus musculus
Mus musculus
18,917,757
(2,101,973 x 9)
9 by_platform
by_series
17 Upregulation of the mammalian X chromosome is associated with enhanced transcription initiation, MOF-mediated H4K16 acetylation, and longer RNA half-life (GSE44835) [Tiling Array] NimbleGen Mouse 2.1 M array 10 of 10 (GPL10129) University of Washington 2013-03-04 Mus musculus
Mus musculus
18,917,757
(2,101,973 x 9)
9 by_platform
by_series
18 Study on the genomic changes in ColIa2 Cre x RBP-Jkappa loxp/loxp mice (GSE36464) [Tiling Array] NimbleGen Mouse CGH Whole-Genome Tiling Array [080411_MM9_CGH_HX1] (GPL11368) University of Lausanne 2012-03-13 Mus musculus
Mus musculus
18,814,230
(2,090,470 x 9)
9 by_platform
by_series
19 High resolution analysis of epigenetic changes associated with X inactivation, ChIP-chip (GSE15883) [Tiling Array] Radboud University Mus musculus 385K Tiling array [2006-07-17_MM8Tiling_Set38] (GPL8656) Radboud University 2009-04-29 Mus musculus
Mus musculus
18,502,416
(385,467 x 48)
48 by_platform
by_series
20 High resolution analysis of epigenetic changes associated with X inactivation (GSE15884) [Tiling Array] Radboud University Mus musculus 385K Tiling array [2006-07-17_MM8Tiling_Set38] (GPL8656) Radboud University 2009-04-29 Mus musculus
Mus musculus
18,502,416
(385,467 x 48)
48 by_platform
by_series