Gene Expression Omnibus (GEO) Overview Version：2013-06-15Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(813)		   Primates
(7)		   Rodents
(808)		   Mammals
(22)		   Vertebrates
(41)		   Invertebrates
(88)		   Plants
(473)		   Bacteria
(149)		   Viruses
(1)		   Phages
(0)		   Unclassified
(6)		   All
(2,408)		  
  SAGE NlaIII
(3)		   SAGE RsaI
(1)		   SAGE Sau3A
(0)		   MPSS
(0)		   GeneChip
(396)		   Tiling Array
(10)		   cDNA Array
(22)		   Oligo Array
(343)		   Bead Array
(12)		   Protein Array
(0)		   Antibody
(0)		   RT-PCR
(2)		   HT-Seq
(18)		   Other
(1)		   All
(808)		  
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Title Platform Institute Submission date Species Data size
(probes x samples)		 Sample NCBI
FTP
site
Animal Plant  
brain blood connective reproductive muscular digestive liver lung urinary endo/exo-crine embryo adult aerial structure young aerial structure root meristem/growing tissue flower/sexual organ seed/fruit/grain pooled unclassified
1 Expression profiles of primary motor neurons after knocking down Fus (GSE42421) [GeneChip] [MoEx-1_0-st] Affymetrix Mouse Exon 1.0 ST Array [probe set (exon) version] (GPL6193) Nagoya University School of Medicine 2012-11-20 Mus musculus
Mus musculus		 33,934,437
(1,256,831 x 27) 		27 by_platform
by_series
2 Expression profiles of primary cortical neurons after knocking down Tdp-43 and Cugbp1 (GSE46148) [GeneChip] [MoEx-1_0-st] Affymetrix Mouse Exon 1.0 ST Array [probe set (exon) version] (GPL6193) Nagoya University School of Medicine 2013-04-17 Mus musculus
Mus musculus		 13,825,141
(1,256,831 x 11) 		11 by_platform
by_series
3 Exon array analysis in the mouse myoblast cell line, C2C12 cells treated with control-, Cugbp1- or Mbnl1-siRNA (GSE29990) [GeneChip] [MoEx-1_0-st] Affymetrix Mouse Exon 1.0 ST Array [probe set (exon) version] (GPL6193) Nagoya University Graduate School of Medicine 2011-06-15 Mus musculus
Mus musculus		 11,311,479
(1,256,831 x 9) 		9 by_platform
by_series
4 Expression profiles of primary cortical neurons after knocking down Fus (GSE36153) [GeneChip] [MoEx-1_0-st] Affymetrix Mouse Exon 1.0 ST Array [probe set (exon) version] (GPL6193) Nagoya University Graduate School of Medicine 2012-02-29 Mus musculus
Mus musculus		 11,311,479
(1,256,831 x 9) 		9 by_platform
by_series
5 Expression profiles of primary cortical neurons after knocking down Tdp-43 (GSE46146) [GeneChip] [MoEx-1_0-st] Affymetrix Mouse Exon 1.0 ST Array [probe set (exon) version] (GPL6193) Nagoya University School of Medicine 2013-04-17 Mus musculus
Mus musculus		 11,311,479
(1,256,831 x 9) 		9 by_platform
by_series
6 P19 neuronal cell differentiation (GSE23710) [GeneChip] [MoEx-1_0-st] Affymetrix Mouse Exon 1.0 ST Array [probe set (exon) version] (GPL6193) JAIST 2010-08-19 Mus musculus
Mus musculus		 7,540,986
(1,256,831 x 6) 		4 2 by_platform
by_series
7 Rat liver. Control vs. Chemical treated: time course (GSE16752) [Oligo Array] CERI Rat 6.7K ToxArrayIII (GPL8576) Chemicals Evaluation and Research Institute, Japan 2009-06-23 Rattus norvegicus
Rattus norvegicus		 6,984,069
(6,709 x 1,041) 		1,041 by_platform
by_series
8 Chromosomal aberration of asbestos-induced malignant mesothelioma in rats (GSE36577) [Oligo Array] Agilent-015223 Rat Genome CGH Microarray 244A (GPL15358) Nagoya University 2012-03-16 Rattus norvegicus
Rattus norvegicus		 6,574,608
(243,504 x 27) 		27 by_platform
by_series
9 Expression data from single cells from mouse primordial germ cell lineage (E6.25-E8.25, wild type and Blimp1KO) (GSE11128) [GeneChip] [Mouse430_2] Affymetrix Mouse Genome 430 2.0 Array (GPL1261) Kyoto University 2008-04-10 Mus musculus
Mus musculus		 4,780,706
(45,101 x 106) 		10 24 8 64 by_platform
by_series
10 Expression profile of adult mouse 51 CNS regions (GSE16496) [GeneChip] [Mouse430_2] Affymetrix Mouse Genome 430 2.0 Array (GPL1261) RIKEN 2009-06-08 Mus musculus
Mus musculus		 4,600,302
(45,101 x 102) 		66 6 4 2 24 by_platform
by_series
11 Gene expression profiles of four murine tumors after carbon-ion (C-ion) or gamma irradiation. (GSE11629) [Oligo Array] GE Healthcare/Amersham Biosciences CodeLinkâ„¢ Mouse Whole Genome Bioarray (GPL2897) National Institute of Radiological Sciences 2008-06-02 Mus musculus
Mus musculus		 4,040,960
(45,920 x 88) 		44 44 by_platform
by_series
12 Expression data from P7 mouse cerebral cortex and hippocampus -CTCF Nex-Cre mediated conditional knockout (GSE38673) [GeneChip] [MoEx-1_0-st] Affymetrix Mouse Exon 1.0 ST Array [transcript (gene) version] (GPL6096) osaka university 2012-06-12 Mus musculus
Mus musculus		 3,975,328
(283,952 x 14) 		14 by_platform
by_series
13 Genome-wide analysis of expression and DNA methylation at CpG-island-associated sense-antisense transcript loci in mouse (GSE14392) [Oligo Array] Agilent Mouse 244k CpG-island-associated SAT promoter array (GPL8065) RIKEN Tsukuba Institute 2009-01-13 Mus musculus
Mus musculus		 3,882,670
(176,485 x 22) 		2 4 3 2 4 2 2 3 by_platform
by_series
14 ChIP-on-chip analysis of Ring1B, Ring1A, H2AK119u1 and H3K27me3 in mouse ES cells (GSE38504) [Oligo Array] Agilent-014716 Mouse Promoter ChIP-on-Chip Set 244K, Microarray 1 of 2 (G4490A) (Probe Name version) (GPL14573) RIKEN 2012-06-05 Mus musculus
Mus musculus		 3,367,154
(240,511 x 14) 		13 1 by_platform
by_series
15 Histone H2A mono-ubiquitination is a crucial step to mediate PRC1 dependent repression of developmental genes to maintain ES cell identity. (GSE38650) [Oligo Array] Agilent-014716 Mouse Promoter ChIP-on-Chip Set 244K, Microarray 1 of 2 (G4490A) (Probe Name version) (GPL14573) RIKEN 2012-06-11 Mus musculus
Mus musculus		 3,367,154
(240,511 x 14) 		13 1 by_platform
by_series
16 ChIP-on-chip analysis of Ring1B, Ring1A, H2AK119u1 and H3K27me3 in mouse ES cells (GSE38504) [Oligo Array] Agilent-014717 Mouse Promoter ChIP-on-Chip Set 244K, Microarray 2 of 2 (G4490A) (Probe Name version) (GPL14597) RIKEN 2012-06-05 Mus musculus
Mus musculus		 3,367,014
(240,501 x 14) 		13 1 by_platform
by_series
17 Histone H2A mono-ubiquitination is a crucial step to mediate PRC1 dependent repression of developmental genes to maintain ES cell identity. (GSE38650) [Oligo Array] Agilent-014717 Mouse Promoter ChIP-on-Chip Set 244K, Microarray 2 of 2 (G4490A) (Probe Name version) (GPL14597) RIKEN 2012-06-11 Mus musculus
Mus musculus		 3,367,014
(240,501 x 14) 		13 1 by_platform
by_series
18 Properties of mammalian neural progenitor cells as revealed by genome-wide single cell gene expression profiles (GSE10881) [GeneChip] [Mouse430_2] Affymetrix Mouse Genome 430 2.0 Array (GPL1261) RIKEN 2008-03-18 Mus musculus
Mus musculus		 3,157,070
(45,101 x 70) 		70 by_platform
by_series
19 Protective efficacy of orally administered, heat-killed Lactobacillus pentosus b240 against influenza A virus (GSE43764) [Oligo Array] Agilent-028005 SurePrint G3 Mouse GE 8x60K Microarray (Feature Number version) (GPL13912) University of Tokyo, Institute of Medical Science 2013-01-25 Mus musculus
Mus musculus		 3,022,848
(62,976 x 48) 		48 by_platform
by_series
20 Genomic profiles of oxidative stress-induced rat renal cell carcinomas (GSE36101) [Oligo Array] Agilent-014339 Rat genome CGH 185K microarray (GPL15255) Nagoya University 2012-02-27 Rattus norvegicus
Rattus norvegicus		 2,949,328
(184,333 x 16) 		16 by_platform
by_series
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