Gene Expression Omnibus (GEO) Overview Version´╝Ü2014-04-12Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(72)
  Primates
(0)
  Rodents
(114)
  Mammals
(3)
  Vertebrates
(1)
  Invertebrates
(5)
  Plants
(44)
  Bacteria
(15)
  Viruses
(1)
  Phages
(0)
  Unclassified
(0)
  All
(255)
 
  SAGE NlaIII
(3)
  SAGE RsaI
(0)
  SAGE Sau3A
(0)
  MPSS
(1)
  GeneChip
(63)
  Tiling Array
(1)
  cDNA Array
(33)
  Oligo Array
(13)
  Bead Array
(0)
  Protein Array
(0)
  Antibody
(0)
  RT-PCR
(0)
  HT-Seq
(0)
  Other
(0)
  All
(114)
 
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Title Platform Institute Submission date Species Data size
(probes x samples)
Sample NCBI
FTP
site
Animal Plant  
brain blood connective reproductive muscular digestive liver lung urinary endo/exo-crine embryo adult aerial structure young aerial structure root meristem/growing tissue flower/sexual organ seed/fruit/grain pooled unclassified
1 MPSS mouse transcriptome analysis project (GSE1581) [MPSS] MPSS [DpnII: Mus musculus] signature list (GPL1010) Solexa 2004-07-21 Mus musculus
Mus musculus
6,242,424
(71,752 x 87)
22 6 10 6 6 7 3 2 3 7 3 12 by_platform
by_series
2 Normal and injured liver sinusoidal endothelial cells (GSE1689) [SAGE NlaIII] SAGE:10:NlaIII:Mus musculus (GPL11) University of Tokyo 2004-08-18 Mus musculus
Mus musculus
1,579,064
(789,532 x 2)
2 by_platform
by_series
3 Luteinisation genes (GSE1771) [SAGE NlaIII] SAGE:10:NlaIII:Mus musculus (GPL11) University of Glasgow Veterinary School 2004-09-16 Mus musculus
Mus musculus
1,579,064
(789,532 x 2)
2 by_platform
by_series
4 Mouse Expression Database (GSE1701) [cDNA Array] IncyteMouseGEM1 (GPL1406) Cincinnati Children's Hospital Medical Center 2004-08-24 Mus musculus
Mus musculus
1,493,514
(8,734 x 171)
16 11 20 8 16 39 12 16 8 7 8 10 by_platform
by_series
5 Aortas of mice on high fat diet (GSE1560) [Oligo Array] Agilent-011978 Mouse Microarray G4121A (Feature Number version) (GPL891) Stanford 2004-07-13 Mus musculus
Mus musculus
1,219,050
(22,575 x 54)
54 by_platform
by_series
6 Skeletal muscle allotypes (GSE1806) [GeneChip] [Mouse430_2] Affymetrix Mouse Genome 430 2.0 Array (GPL1261) Case Western Reserve University 2004-09-28 Mus musculus
Mus musculus
992,222
(45,101 x 22)
3 13 6 by_platform
by_series
7 Rat Kidney Methylprednisolone (GSE1721) [GeneChip] [RAE230A] Affymetrix Rat Expression 230A Array (GPL341) Children's National Medical Center 2004-09-01 Rattus norvegicus
Rattus norvegicus
843,919
(15,923 x 53)
53 by_platform
by_series
8 A Bioinformatics Analysis of Memory Consolidation Reveals Involvement of the Transcription Factor c-Rel (GSE1782) [GeneChip] [MG_U74Av2] Affymetrix Murine Genome U74A Version 2 Array (GPL81) California Institute of Technology 2004-09-20 Mus musculus
Mus musculus
799,232
(12,488 x 64)
64 by_platform
by_series
9 Time-course of mdx and wild type mice (GSE1574) [Oligo Array] LGTCmuOLIs1 (GPL485) Leiden University Medical Center 2004-07-20 Mus musculus
Mus musculus
559,872
(15,552 x 36)
36 by_platform
by_series
10 Effect of Isoflurane and LTM on basolateral amygdala (GSE1779) [GeneChip] [RAE230A] Affymetrix Rat Expression 230A Array (GPL341) University at Stony Brook 2004-09-17 Rattus norvegicus
Rattus norvegicus
461,767
(15,923 x 29)
29 by_platform
by_series
11 Preimplantation mouse embryo development MOE430A (GSE1744) [GeneChip] [MOE430A] Affymetrix Mouse Expression 430A Array (GPL339) University of Pennsylvania 2004-09-10 Mus musculus
Mus musculus
453,800
(22,690 x 20)
20 by_platform
by_series
12 Preimplantation mouse embryo development (GSE1749) [GeneChip] [MOE430A] Affymetrix Mouse Expression 430A Array (GPL339) University of Pennsylvania 2004-09-13 Mus musculus
Mus musculus
453,800
(22,690 x 20)
20 by_platform
by_series
13 Preimplantation mouse embryo development MOE430B (GSE1745) [GeneChip] [MOE430B] Affymetrix Mouse Expression 430B Array (GPL340) University of Pennsylvania 2004-09-10 Mus musculus
Mus musculus
451,500
(22,575 x 20)
20 by_platform
by_series
14 Preimplantation mouse embryo development (GSE1749) [GeneChip] [MOE430B] Affymetrix Mouse Expression 430B Array (GPL340) University of Pennsylvania 2004-09-13 Mus musculus
Mus musculus
451,500
(22,575 x 20)
20 by_platform
by_series
15 Effect of Neuromedin U on gene expression in murine T cells (GSE1791) [GeneChip] [MG_U74Av2] Affymetrix Murine Genome U74A Version 2 Array (GPL81) GLAXOSMITHKLINE 2004-09-21 Mus musculus
Mus musculus
387,128
(12,488 x 31)
31 by_platform
by_series
16 Striatum from rats treated with methamphetamine (GSE1711) [SAGE NlaIII] SAGE:10:NlaIII:Rattus norvegicus (GPL23) National Institute on Drug Abuse 2004-08-27 Rattus norvegicus
Rattus norvegicus
381,770
(190,885 x 2)
2 by_platform
by_series
17 Conditional activation of B-catenin in adult mouse epidermis for 0, 1, or 7 days (GSE1579) [GeneChip] [MOE430A] Affymetrix Mouse Expression 430A Array (GPL339) Cancer Research UK 2004-07-21 Mus musculus
Mus musculus
363,040
(22,690 x 16)
16 by_platform
by_series
18 Probing miRNAs with microarrays: tissue specificity and functional inference (GSE1738) [Tiling Array] Mouse miRNA chip (GPL1437) Best Institute 2004-09-07 Mus musculus
Mus musculus
351,024
(21,939 x 16)
1 1 2 2 2 1 1 1 4 1 by_platform
by_series
19 27_RA_RMA_Jan04_time_course (GSE1588) [GeneChip] [MG_U74Av2] Affymetrix Murine Genome U74A Version 2 Array (GPL81) Cincinnati Children's Hopital Medical Center 2004-07-23 Mus musculus
Mus musculus
337,176
(12,488 x 27)
27 by_platform
by_series
20 Transcriptional profiling with a Blood Pressure QTL interval-specific oligonucleotide array (GSE1622) [cDNA Array] Rat 27K cDNA array (GPL1350) The Institute for Genomic Research 2004-07-28 Rattus norvegicus
Rattus norvegicus
331,776
(27,648 x 12)
12 by_platform
by_series
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