Gene Expression Omnibus (GEO) Overview Version：2013-04-06Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data Unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(0)		   Primates
(0)		   Rodents
(3)		   Mammals
(0)		   Vertebrates
(0)		   Invertebrates
(0)		   Plants
(1)		   Bacteria
(1)		   Viruses
(0)		   Phages
(0)		   Unclassified
(0)		   All
(5)		  
  SAGE NlaIII
(0)		   SAGE RsaI
(0)		   SAGE Sau3A
(0)		   MPSS
(0)		   GeneChip
(0)		   Tiling Array
(0)		   cDNA Array
(1)		   Oligo Array
(2)		   Bead Array
(0)		   Protein Array
(0)		   Antibody
(0)		   RT-PCR
(0)		   HT-Seq
(0)		   Other
(0)		   All
(3)		  
Platform ID Title Number of the probes Institute Submission date Manufacturer Species Platform class Reasoning of the classification
Keywords used for the classification are shown with bold font.
1 GPL1537 Mouse XM microarray set 39,309 University of Toronto 2004-10-27 Mus musculus
Mus musculus		 Oligo Array spotted oligonucleotide, Mouse XM microarray set, Agilent custom 60-mer oligonucleotide arrays
2 GPL1738 Agilent Custom Mouse Alternative Splicing Oligo Microarray 21,882 University of Toronto 2004-12-08 Mus musculus
Mus musculus		 Oligo Array spotted oligonucleotide, Agilent Custom Mouse Alternative Splicing Oligo Microarray, A new quantitative alternative splicing microarray platform. We describe the application of a new microarray platform, which combines information from exon body and splice-junction probes, to analyze the regulation of 3126 alternative splicing events in ten mouse tissues. The details of the methods and algorithms are described in this paper: Revealing global regulatory features of mammalian alternative splicing using a quantitative microarray platform (Molecular Cell, Dec., 2004) Keywords = A new quantitative alternative splicing microarray platform
3 GPL1487 BMAP_HGPD 11,136 Canadian Science Centre for Human and Animal Health 2004-10-09 Mus musculus
Mus musculus		 cDNA Array spotted DNA/cDNA, BMAP_HGPD, Libraries and clones derived from brain regions of adult mouse (strain c57BL6) were obtained from Research Genetics, Inc. The 11,136 clones represent expressed sequence tags (ESTs) from some 5,471 unique known genes and 5,665 mRNAs as yet uncharacterised, and form part of a library created as part of the Brain Molecular Anatomy Project (BMAP). Each insert from this BMAP 3 EST library was amplified by PCR. The cDNA was purified using Millipore multiwell purification plates (Millipore Inc.), and lyophilised PCR products were resuspended in 1 X Micro Spotting Solution Plus (TeleChem International, Inc.) at a concentration of 0.25-0.75 µg/µl. DNA was spotted onto CMT-GAPS coated glass slides (Corning) using Stealth micro-spotting pins (TeleChem International, Inc.).
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