Gene Expression Omnibus (GEO) Overview Version´╝Ü2014-04-12Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(204)
  Primates
(1)
  Rodents
(191)
  Mammals
(6)
  Vertebrates
(19)
  Invertebrates
(50)
  Plants
(84)
  Bacteria
(74)
  Viruses
(1)
  Phages
(0)
  Unclassified
(2)
  All
(632)
 
  SAGE NlaIII
(3)
  SAGE RsaI
(0)
  SAGE Sau3A
(1)
  MPSS
(1)
  GeneChip
(115)
  Tiling Array
(0)
  cDNA Array
(18)
  Oligo Array
(51)
  Bead Array
(0)
  Protein Array
(0)
  Antibody
(0)
  RT-PCR
(0)
  HT-Seq
(0)
  Other
(2)
  All
(191)
 
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Title Platform Institute Submission date Species Data size
(probes x samples)
Sample NCBI
FTP
site
Animal Plant  
brain blood connective reproductive muscular digestive liver lung urinary endo/exo-crine embryo adult aerial structure young aerial structure root meristem/growing tissue flower/sexual organ seed/fruit/grain pooled unclassified
1 Mouse Atlas of Gene Expression Project (GSE4726) [SAGE NlaIII] SAGE:17:NlaIII:Mus musculus (GPL1349) Canada's Michael Smith Genome Sciences Centre 2006-04-26 Mus musculus
Mus musculus
490,560,048
(2,477,576 x 198)
70 9 5 14 11 12 3 7 15 22 17 13 by_platform
by_series
2 PPARalpha Agonists Induce a Fiber-Type Selective Transcriptional Response in Rat Skeletal Muscle (GSE5100) [Oligo Array] Rosetta/Merck Rat 50k v2.1 Array 1 microarray (GPL3631) Merck & Co. 2006-06-19 Rattus norvegicus
Rattus norvegicus
11,448,052
(23,653 x 484)
132 147 205 by_platform
by_series
3 Embryonic and adult neural crest stem cells (GSE4680) [SAGE NlaIII] SAGE:17:NlaIII:Mus musculus (GPL1349) Newcastle University 2006-04-17 Mus musculus
Mus musculus
7,432,728
(2,477,576 x 3)
2 1 by_platform
by_series
4 Suz12, EZH2, EED1, H3me3K27, H3me3K9 and RNA Pol II target promoters in mouse F9 and mES cells (GSE4908) [Oligo Array] Nimblegen Mouse 1.5 kb promoter array [2006-11-16_MM5_min_promoter] (GPL3793) UC Davis Genome Center 2006-05-23 Mus musculus
Mus musculus
5,409,936
(386,424 x 14)
14 by_platform
by_series
5 10 Strain, 7 Brain Region (GSE5055) [Oligo Array] Agilent-011978 Mouse Microarray G4121A (Feature Number version) (GPL891) University of North Carolina 2006-06-12 Mus musculus
Mus musculus
4,808,475
(22,575 x 213)
182 31 by_platform
by_series
6 Mouse Atlas of Gene Expression Project (GSE4726) [SAGE NlaIII] SAGE:10:NlaIII:Mus musculus (GPL11) Canada's Michael Smith Genome Sciences Centre 2006-04-26 Mus musculus
Mus musculus
3,947,660
(789,532 x 5)
1 1 1 2 by_platform
by_series
7 Mouse brain region gene expression (430 2.0 Array) (GSE4734) [GeneChip] [Mouse430_2] Affymetrix Mouse Genome 430 2.0 Array (GPL1261) The Salk Institute for Biological Studies 2006-04-28 Mus musculus
Mus musculus
2,751,161
(45,101 x 61)
49 12 by_platform
by_series
8 Thrivikraman-5P50MH058922-050002 (GSE4776) [GeneChip] [Rat230_2] Affymetrix Rat Genome 230 2.0 Array (GPL1355) Translational Genomics 2006-05-04 Rattus norvegicus
Rattus norvegicus
2,550,118
(31,099 x 82)
82 by_platform
by_series
9 Accurate and precise transcriptional profiles from 50 pg of total RNA or 100 flow-sorted primary lymphocytes (GSE5130) [GeneChip] [MOE430A] Affymetrix Mouse Expression 430A Array (GPL339) Biogen Idec 2006-06-22 Mus musculus
Mus musculus
2,337,070
(22,690 x 103)
2 2 2 2 2 2 2 2 18 69 by_platform
by_series
10 Liver transcriptome (BXD) (GSE4640) [Oligo Array] RIKEN Mouse Neues microarray version 2 (GPL3437) Saitama Medical School 2006-04-09 Mus musculus
Mus musculus
1,799,244
(21,942 x 82)
82 by_platform
by_series
11 Mouse models of human colon cancer and mouse colon development (GSE5204) [cDNA Array] Vandy NIA Mouse 20k (GPL3899) Cincinnati Children's Hospital Medical Center 2006-06-30 Mus musculus
Mus musculus
1,605,201
(20,319 x 79)
79 by_platform
by_series
12 shRNAi induced differentiation time courses in mouse embrionic stem cells. (GSE4679) [GeneChip] [MOE430A] Affymetrix Mouse Expression 430A Array (GPL339) Princeton University 2006-04-17 Mus musculus
Mus musculus
1,588,300
(22,690 x 70)
70 by_platform
by_series
13 shRNAi induced differentiation time courses in mouse embrionic stem cells. (GSE4679) [GeneChip] [MOE430B] Affymetrix Mouse Expression 430B Array (GPL340) Princeton University 2006-04-17 Mus musculus
Mus musculus
1,580,250
(22,575 x 70)
70 by_platform
by_series
14 Suz12, EZH2 and H3me3K27 binding sites in F9 cells (GSE4907) [Oligo Array] Nimblegen Mouse custom array (GPL3794) UC Davis Genome Center 2006-05-23 Mus musculus
Mus musculus
1,527,504
(381,876 x 4)
4 by_platform
by_series
15 Gene expression of RAW 264.7 cells treated with LPS, IFG, 2MA, LPS PLUS IFG, and LPS PLUS 2MA (GSE4962) [Oligo Array] Caltech 16K Oligo Mouse Array (GPL254) California Institute of Technology 2006-06-01 Mus musculus
Mus musculus
1,465,290
(16,281 x 90)
90 by_platform
by_series
16 Gene expression of RAW 264.7 cells treated with LPS, ISO, PGE2, LPS PLUS ISO, and LPS PLUS PGE2 (GSE4964) [Oligo Array] Caltech 16K Oligo Mouse Array (GPL254) California Institute of Technology 2006-06-01 Mus musculus
Mus musculus
1,432,728
(16,281 x 88)
88 by_platform
by_series
17 Microarray Analysis of the Delipidation of White Adipose Tissue of Mice Fed Conjugated Linoleic Acid (GSE4671) [GeneChip] [Mouse430_2] Affymetrix Mouse Genome 430 2.0 Array (GPL1261) University of Nebraska, Lincoln 2006-04-13 Mus musculus
Mus musculus
1,262,828
(45,101 x 28)
28 by_platform
by_series
18 Identification of putative learning and memory genes in the dentate gyrus of aged rats following the Morris Water Maze (GSE4821) [GeneChip] [RAE230A] Affymetrix Rat Expression 230A Array (GPL341) University of Florida 2006-05-12 Rattus norvegicus
Rattus norvegicus
1,257,917
(15,923 x 79)
79 by_platform
by_series
19 wilso-affy-rat-132990 (GSE4753) [GeneChip] [Rat230_2] Affymetrix Rat Genome 230 2.0 Array (GPL1355) Translational Genomics 2006-05-01 Rattus norvegicus
Rattus norvegicus
1,243,960
(31,099 x 40)
40 by_platform
by_series
20 Comparison of linear and exponential amplification techniques for expression profiling at the single-cell level (GSE5136) [Oligo Array] FJL Mouse Compugen 22K Oligo (GPL2584) Queen Mary University London 2006-06-23 Mus musculus
Mus musculus
1,232,336
(22,006 x 56)
4 1 24 27 by_platform
by_series
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