Gene Expression Omnibus (GEO) Overview Version：2013-06-15Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data Unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(3,761)		   Primates
(39)		   Rodents
(1,779)		   Mammals
(312)		   Vertebrates
(411)		   Invertebrates
(1,032)		   Plants
(2,239)		   Bacteria
(1,690)		   Viruses
(78)		   Phages
(8)		   Unclassified
(430)		   All
(11,831)		  
  SAGE NlaIII
(6)		   SAGE RsaI
(1)		   SAGE Sau3A
(2)		   MPSS
(4)		   GeneChip
(139)		   Tiling Array
(142)		   cDNA Array
(403)		   Oligo Array
(869)		   Bead Array
(58)		   Protein Array
(0)		   Antibody
(3)		   RT-PCR
(54)		   HT-Seq
(85)		   Other
(13)		   All
(1,779)		  
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Platform ID Title Number of the probes Institute Submission date Manufacturer Species Platform class Reasoning of the classification
Keywords used for the classification are shown with bold font.
1 GPL6628 Affymetrix non-commercial Mouse Tiling 1.0 Array 16 13,939,854 Affymetrix, Inc. 2008-03-19 Affymetrix Mus musculus
Mus musculus		 Tiling Array in situ oligonucleotide, Affymetrix non-commercial Mouse Tiling 1.0 Array 16,
2 GPL7059 Whitehead-Young-Mouse-Solexa (small RNA sequences) 6,901,774 Whitehead Institute 2008-07-16 not applicable Mus musculus
Mus musculus		 HT Sequencing other, Whitehead-Young-Mouse-Solexa (small RNA sequences), Solexa sequencing Data generated at Center for Advanced Genome Technology at Whitehead Institute using Genome Analyzer manufactured by Solexa/Illumina (Sequencing by Synthesis)
3 GPL6627 Affymetrix non-commercial Mouse Tiling 1.0 Array 15 3,635,742 Affymetrix, Inc. 2008-03-19 Affymetrix Mus musculus
Mus musculus		 Tiling Array in situ oligonucleotide, Affymetrix non-commercial Mouse Tiling 1.0 Array 15,
4 GPL6621 Affymetrix non-commercial Mouse Tiling 1.0 Array 9 3,498,544 Affymetrix, Inc. 2008-03-19 Affymetrix Mus musculus
Mus musculus		 Tiling Array in situ oligonucleotide, Affymetrix non-commercial Mouse Tiling 1.0 Array 9,
5 GPL6616 Affymetrix non-commercial Mouse Tiling 1.0 Array 4 3,425,847 Affymetrix, Inc. 2008-03-19 Affymetrix Mus musculus
Mus musculus		 Tiling Array in situ oligonucleotide, Affymetrix non-commercial Mouse Tiling 1.0 Array 4,
6 GPL6620 Affymetrix non-commercial Mouse Tiling 1.0 Array 8 3,379,973 Affymetrix, Inc. 2008-03-19 Affymetrix Mus musculus
Mus musculus		 Tiling Array in situ oligonucleotide, Affymetrix non-commercial Mouse Tiling 1.0 Array 8,
7 GPL6618 Affymetrix non-commercial Mouse Tiling 1.0 Array 6 3,286,485 Affymetrix, Inc. 2008-03-19 Affymetrix Mus musculus
Mus musculus		 Tiling Array in situ oligonucleotide, Affymetrix non-commercial Mouse Tiling 1.0 Array 6,
8 GPL6623 Affymetrix non-commercial Mouse Tiling 1.0 Array 11 3,271,400 Affymetrix, Inc. 2008-03-19 Affymetrix Mus musculus
Mus musculus		 Tiling Array in situ oligonucleotide, Affymetrix non-commercial Mouse Tiling 1.0 Array 11,
9 GPL6622 Affymetrix non-commercial Mouse Tiling 1.0 Array 10 3,266,664 Affymetrix, Inc. 2008-03-19 Affymetrix Mus musculus
Mus musculus		 Tiling Array in situ oligonucleotide, Affymetrix non-commercial Mouse Tiling 1.0 Array 10,
10 GPL6625 Affymetrix non-commercial Mouse Tiling 1.0 Array 13 3,257,285 Affymetrix, Inc. 2008-03-19 Affymetrix Mus musculus
Mus musculus		 Tiling Array in situ oligonucleotide, Affymetrix non-commercial Mouse Tiling 1.0 Array 13,
11 GPL6626 Affymetrix non-commercial Mouse Tiling 1.0 Array 14 3,205,219 Affymetrix, Inc. 2008-03-19 Affymetrix Mus musculus
Mus musculus		 Tiling Array in situ oligonucleotide, Affymetrix non-commercial Mouse Tiling 1.0 Array 14,
12 GPL6619 Affymetrix non-commercial Mouse Tiling 1.0 Array 7 3,180,206 Affymetrix, Inc. 2008-03-19 Affymetrix Mus musculus
Mus musculus		 Tiling Array in situ oligonucleotide, Affymetrix non-commercial Mouse Tiling 1.0 Array 7,
13 GPL6614 Affymetrix non-commercial Mouse Tiling 1.0 Array 2 3,165,977 Affymetrix, Inc. 2008-03-19 Affymetrix Mus musculus
Mus musculus		 Tiling Array in situ oligonucleotide, Affymetrix non-commercial Mouse Tiling 1.0 Array 2,
14 GPL6624 Affymetrix non-commercial Mouse Tiling 1.0 Array 12 3,159,924 Affymetrix, Inc. 2008-03-19 Affymetrix Mus musculus
Mus musculus		 Tiling Array in situ oligonucleotide, Affymetrix non-commercial Mouse Tiling 1.0 Array 12,
15 GPL6617 Affymetrix non-commercial Mouse Tiling 1.0 Array 5 3,149,259 Affymetrix, Inc. 2008-03-19 Affymetrix Mus musculus
Mus musculus		 Tiling Array in situ oligonucleotide, Affymetrix non-commercial Mouse Tiling 1.0 Array 5,
16 GPL6615 Affymetrix non-commercial Mouse Tiling 1.0 Array 3 3,128,969 Affymetrix, Inc. 2008-03-19 Affymetrix Mus musculus
Mus musculus		 Tiling Array in situ oligonucleotide, Affymetrix non-commercial Mouse Tiling 1.0 Array 3,
17 GPL6613 Affymetrix non-commercial Mouse Tiling 1.0 Array 1 3,104,210 Affymetrix, Inc. 2008-03-19 Affymetrix Mus musculus
Mus musculus		 Tiling Array in situ oligonucleotide, Affymetrix non-commercial Mouse Tiling 1.0 Array 1,
18 GPL6363 NimbleGen Mouse 3.1M NCBI36 3,076,954 Children's Hospital, Boston 2008-01-10 NimbleGen Roche Mus musculus
Mus musculus		 Oligo Array in situ oligonucleotide, NimbleGen Mouse 3.1M NCBI36,
19 GPL1349 SAGE:17:NlaIII:Mus musculus 2,477,576 2004-07-15 Mus musculus
Mus musculus		 SAGE NlaIII SAGE NlaIII, SAGE:17:NlaIII:Mus musculus, This is a virtual platform for longSAGE 17 libraries generated for Mus musculus using NlaIII as an anchor enzyme. Platform_anchor: NlaIII
20 GPL13147 [MOUSEDIVm520650] Affymetrix Mouse Diversity Genotyping Array 2,458,697 Affymetrix, Inc. 2011-02-09 Affymetrix Mus musculus
Mus musculus		 GeneChip in situ oligonucleotide, [MOUSEDIVm520650] Affymetrix Mouse Diversity Genotyping Array, Affymetrix submissions are typically submitted to GEO using the GEOarchive method described at http://www.ncbi.nlm.nih.gov/projects/geo/info/geo_affy.html Below table was obtained after merging the corresponding CN or SNP annot.csv files provided by Affymetrix: MOUSEDIVm520650.cn.na32.annot.csv #%create_date=2011-09-20 GMT-08:00 14:37:53 #%chip_type=MOUSEDIVm520650 #%genome-species=Mus musculus #%genome-version=mm9 #%genome-version-ucsc=mm9 #%genome-version-ncbi=37 #%genome-version-create_date=2007-07-00 #%dbSNP_date=2010-09-23 #%dbSNP_version=132 #%netaffx-annotation-date=2011-06-22 #%netaffx-annotation-netaffx-build=32 MOUSEDIVm520650.na32.annot.csv #%create_date=2011-10-24 GMT-08:00 16:10:34 #%chip_type=MOUSEDIVm520650 #%genome-species=Mus musculus #%genome-version=mm9 #%genome-version-ucsc=mm9 #%genome-version-ncbi=37 #%genome-version-create_date=2007-07-00 #%dbSNP_date=2010-09-23 #%dbSNP_version=132 #%netaffx-annotation-date=2011-06-22 #%netaffx-annotation-netaffx-build=32
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