Gene Expression Omnibus (GEO) Overview Version：2013-04-06Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.

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Data Unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(502,421)		   Primates
(4,928)		   Rodents
(181,106)		   Mammals
(16,260)		   Vertebrates
(18,263)		   Invertebrates
(37,338)		   Plants
(91,454)		   Bacteria
(39,082)		   Viruses
(1,266)		   Phages
(101)		   Unclassified
(5,242)		   All
(898,944)		  
  SAGE NlaIII
(718)		   SAGE RsaI
(3)		   SAGE Sau3A
(37)		   MPSS
(100)		   GeneChip
(89,973)		   Tiling Array
(2,000)		   cDNA Array
(11,116)		   Oligo Array
(53,181)		   Bead Array
(13,914)		   Protein Array
(0)		   Antibody
(22)		   RT-PCR
(885)		   HT-Seq
(8,762)		   Other
(395)		   All
(181,106)		  
  brain
(0)		   blood
(0)		   connective
(0)		   reproductive
(6,618)		   muscular
(11,970)		   digestive
(4,585)		   liver
(0)		   lung
(8,052)		   urinary
(4,873)		   endo/exo-crine
(0)		   embryo
(7,581)		   adult aerial structure
(0)		   young aerial structure
(0)		   root
(0)		   meristem/growing tissue
(0)		   flower/sexual organ
(0)		   seed/fruit/grain
(0)		   pooled
(0)		   unclassified
(0)		   all
(181,106)		  
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Sample ID Title Number of Data Institute Submission date Platform Sample type Species Organ class Reasoning of the classification
Keywords used for the classification are shown with bold font.
1 GSM999549 MicroRNA expression profile in the large intestine of control mouse 662 Asahikawa Medical University 2012-09-07 [Oligo Array] mirVANA miRNA Bioarray V2 (GPL5106) RNA Mus musculus
Mus musculus		 intestine Large intestine, control
2 GSM999548 MicroRNA expression profile in the large intestine of IL-10-deficient mouse 662 Asahikawa Medical University 2012-09-07 [Oligo Array] mirVANA miRNA Bioarray V2 (GPL5106) RNA Mus musculus
Mus musculus		 intestine Large intestine, IL-10-deficient
3 GSM995710 Adamts12 KO 2%DSS 45,101 UNIVERSIDAD DE OVIEDO 2012-08-31 [GeneChip] [Mouse430_2] Affymetrix Mouse Genome 430 2.0 Array (GPL1261) RNA Mus musculus
Mus musculus		 colon distal colon from Adamts12 KO mouse after induction of ulcerative colitis with DSS
4 GSM995709 Adamts12 WT 2%DSS 45,101 UNIVERSIDAD DE OVIEDO 2012-08-31 [GeneChip] [Mouse430_2] Affymetrix Mouse Genome 430 2.0 Array (GPL1261) RNA Mus musculus
Mus musculus		 colon distal colon from Adamts12 WT mouse after induction of ulcerative colitis with DSS
5 GSM995708 Adamts12 KO untreated 45,101 UNIVERSIDAD DE OVIEDO 2012-08-31 [GeneChip] [Mouse430_2] Affymetrix Mouse Genome 430 2.0 Array (GPL1261) RNA Mus musculus
Mus musculus		 colon distal colon from Adamts12 KO mouse
6 GSM995707 Adamts12 WT untreated 45,101 UNIVERSIDAD DE OVIEDO 2012-08-31 [GeneChip] [Mouse430_2] Affymetrix Mouse Genome 430 2.0 Array (GPL1261) RNA Mus musculus
Mus musculus		 colon distal colon from Adamts12 WT mouse
7 GSM99419 MCE301 cells treated with SB for 24 h-2 22,690 University of Toyama 2006-03-08 [GeneChip] [MOE430A] Affymetrix Mouse Expression 430A Array (GPL339) RNA Mus musculus
Mus musculus		 colon Mouse colonic epithelial cell line MCE301
8 GSM99418 MCE301 cells treated with SB for 12 h-2 22,690 University of Toyama 2006-03-08 [GeneChip] [MOE430A] Affymetrix Mouse Expression 430A Array (GPL339) RNA Mus musculus
Mus musculus		 colon Mouse colonic epithelial cell line MCE301
9 GSM99417 MCE301 cells treated with SB for 6 h-2 22,690 University of Toyama 2006-03-08 [GeneChip] [MOE430A] Affymetrix Mouse Expression 430A Array (GPL339) RNA Mus musculus
Mus musculus		 colon Mouse colonic epithelial cell line MCE301
10 GSM99416 MCE301 cells treated with SB for 0 h-2 22,690 University of Toyama 2006-03-08 [GeneChip] [MOE430A] Affymetrix Mouse Expression 430A Array (GPL339) RNA Mus musculus
Mus musculus		 colon Mouse colonic epithelial cell line MCE301
11 GSM99415 MCE301 cells treated with SB for 24 h-1 22,690 University of Toyama 2006-03-08 [GeneChip] [MOE430A] Affymetrix Mouse Expression 430A Array (GPL339) RNA Mus musculus
Mus musculus		 colon Mouse colonic epithelial cell line MCE301
12 GSM99414 MCE301 cells treated with SB for 12 h-1 22,690 University of Toyama 2006-03-08 [GeneChip] [MOE430A] Affymetrix Mouse Expression 430A Array (GPL339) RNA Mus musculus
Mus musculus		 colon Mouse colonic epithelial cell line MCE301
13 GSM99413 MCE301 cells treated with SB for 6 h-1 22,690 University of Toyama 2006-03-08 [GeneChip] [MOE430A] Affymetrix Mouse Expression 430A Array (GPL339) RNA Mus musculus
Mus musculus		 colon Mouse colonic epithelial cell line MCE301
14 GSM99412 Duodenum_immobilized_2weeks 8,799 Department of Clinical Nutrition, Institute of Health Biosciences, The University of Tokushima Graduate School 2006-03-08 [GeneChip] [RG_U34A] Affymetrix Rat Genome U34 Array (GPL85) RNA Rattus norvegicus
Rattus norvegicus		 intestine duodenal epithelial cells
15 GSM99411 MCE301 cells treated with SB for 0 h-1 22,690 University of Toyama 2006-03-08 [GeneChip] [MOE430A] Affymetrix Mouse Expression 430A Array (GPL339) RNA Mus musculus
Mus musculus		 colon Mouse colonic epithelial cell line MCE301
16 GSM99410 Duodenum_control_2weeks 8,799 Department of Clinical Nutrition, Institute of Health Biosciences, The University of Tokushima Graduate School 2006-03-08 [GeneChip] [RG_U34A] Affymetrix Rat Genome U34 Array (GPL85) RNA Rattus norvegicus
Rattus norvegicus		 intestine duodenal epithelial cells
17 GSM984543 AGR2 null 25,697 Stanford University 2012-08-13 [Bead Array] Illumina Mouse-8 Expression BeadChip (GPL8389) RNA Mus musculus
Mus musculus		 stomach stomach
18 GSM984542 AGR2 wild-type 25,697 Stanford University 2012-08-13 [Bead Array] Illumina Mouse-8 Expression BeadChip (GPL8389) RNA Mus musculus
Mus musculus		 stomach stomach
19 GSM981273 Dll1 GFP high/CD24low 2 45,018 Hubrecht Institute 2012-08-06 [Oligo Array] Agilent-014868 Whole Mouse Genome Microarray 4x44K G4122F (Feature Number version) (GPL4134) RNA Mus musculus
Mus musculus		 intestine FACS sorted epithelial intestinal cells from Dll1-EGFP-ires-CreERT2 mice Total RNA from mouse small intestine
20 GSM981272 Dll1 GFP high/CD24medium 2 45,018 Hubrecht Institute 2012-08-06 [Oligo Array] Agilent-014868 Whole Mouse Genome Microarray 4x44K G4122F (Feature Number version) (GPL4134) RNA Mus musculus
Mus musculus		 intestine FACS sorted epithelial intestinal cells from Dll1-EGFP-ires-CreERT2 mice Total RNA from mouse small intestine
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