Gene Expression Omnibus (GEO) Overview Version：2013-04-06Japanese page

An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.

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Human (502,421)   Primates (4,928)   Rodents (181,106)   Mammals (16,260)   Vertebrates (18,263)   Invertebrates (37,338)   Plants (91,454)   Bacteria (39,082)   Viruses (1,266)   Phages (101)   Unclassified (5,242)   All (898,944)

SAGE NlaIII (718)   SAGE RsaI (3)   SAGE Sau3A (37)   MPSS (100)   GeneChip (89,973)   Tiling Array (2,000)   cDNA Array (11,116)   Oligo Array (53,181)   Bead Array (13,914)   Protein Array (0)   Antibody (22)   RT-PCR (885)   HT-Seq (8,762)   Other (395)   All (181,106)     brain (0)   blood (0)   connective (0)   reproductive (6,618)   muscular (11,970)   digestive (4,585)   liver (30,267)   lung (8,052)   urinary (4,873)   endo/exo-crine (5,381)   embryo (7,581)   adult aerial structure (0)   young aerial structure (0)   root (0)   meristem/growing tissue (0)   flower/sexual organ (0)   seed/fruit/grain (0)   pooled (9,138)   unclassified (32,485)   all (181,106)   1   |   2   |   3   |   4   |   5      »      [230] Sample ID Title Number of Data Institute Submission date Platform Sample type Species Organ class Reasoning of the classification Keywords used for the classification are shown with bold font. 1 GSM1018828 Lgr5(hi) H3K79me2_ChIPSeq 0 Dana-Farber Cancer Institute 2012-10-12 [HT Sequencing] Illumina Genome Analyzer (Mus musculus) (GPL9185) SRA Mus musculus intestine intestinal Lgr5(hi) stem cells 2 GSM1018829 Lgr5(hi) input DNA 0 Dana-Farber Cancer Institute 2012-10-12 [HT Sequencing] Illumina Genome Analyzer (Mus musculus) (GPL9185) SRA Mus musculus intestine intestinal Lgr5(hi) stem cells 3 GSM1018830 villus H3K79me2_ChIPSeq 0 Dana-Farber Cancer Institute 2012-10-12 [HT Sequencing] Illumina Genome Analyzer (Mus musculus) (GPL9185) SRA Mus musculus intestine intestinal villus cells 4 GSM1018831 viillus input DNA 0 Dana-Farber Cancer Institute 2012-10-12 [HT Sequencing] Illumina Genome Analyzer (Mus musculus) (GPL9185) SRA Mus musculus intestine intestinal villus cells 5 GSM1020641 mouse_a_colon 0 MIT 2012-10-17 [HT Sequencing] Illumina HiSeq 2000 (Mus musculus) (GPL13112) SRA Mus musculus colon mouse_colon 6 GSM1020650 mouse_b_colon 0 MIT 2012-10-17 [HT Sequencing] Illumina HiSeq 2000 (Mus musculus) (GPL13112) SRA Mus musculus colon mouse_colon 7 GSM1020658 mouse_c_colon 0 MIT 2012-10-17 [HT Sequencing] Illumina HiSeq 2000 (Mus musculus) (GPL13112) SRA Mus musculus colon mouse_colon 8 GSM1020667 rat_a_colon 0 MIT 2012-10-17 [HT Sequencing] Illumina HiSeq 2000 (Rattus norvegicus) (GPL14844) SRA Rattus norvegicus colon rat_colon 9 GSM1020676 rat_b_colon 0 MIT 2012-10-17 [HT Sequencing] Illumina HiSeq 2000 (Rattus norvegicus) (GPL14844) SRA Rattus norvegicus colon rat_colon 10 GSM1020685 rat_c_colon 0 MIT 2012-10-17 [HT Sequencing] Illumina HiSeq 2000 (Rattus norvegicus) (GPL14844) SRA Rattus norvegicus colon rat_colon 11 GSM1023015 Dot1l_wildtype 0 Dana-Farber Cancer Institute 2012-10-19 [HT Sequencing] Illumina HiSeq 2000 (Mus musculus) (GPL13112) SRA Mus musculus intestine intestinal villus epithelium, wildtype 12 GSM1023016 Dot1l_mutant 0 Dana-Farber Cancer Institute 2012-10-19 [HT Sequencing] Illumina HiSeq 2000 (Mus musculus) (GPL13112) SRA Mus musculus intestine intestinal villus epithelium, Dot1l mutant 13 GSM541604 small_intestine_polyadenylated_RNA-Seq 0 University Clinic of Schleswig Holstein 2010-05-05 [HT Sequencing] AB SOLiD System 2.0 (Mus musculus) (GPL10279) SRA Mus musculus intestine small_intestine_total_tissue 14 GSM541605 colon_polyadenylated_RNA-Seq 0 University Clinic of Schleswig Holstein 2010-05-05 [HT Sequencing] AB SOLiD System 2.0 (Mus musculus) (GPL10279) SRA Mus musculus colon colon_total_tissue 15 GSM541606 small-intestine_ribosomal_RNA_depleted_RNA-Seq 0 University Clinic of Schleswig Holstein 2010-05-05 [HT Sequencing] AB SOLiD System 2.0 (Mus musculus) (GPL10279) SRA Mus musculus intestine small_intestine_total_tissue 16 GSM541607 colon_ribosomal_RNA_depleted_RNA-Seq 0 University Clinic of Schleswig Holstein 2010-05-05 [HT Sequencing] AB SOLiD System 2.0 (Mus musculus) (GPL10279) SRA Mus musculus colon colon_total_tissue 17 GSM607495 CDX2 ChIP-seq in mouse jejunum villus cells 0 Dana Farber Cancer Institute 2010-10-12 [HT Sequencing] Illumina Genome Analyzer II (Mus musculus) (GPL9250) SRA Mus musculus intestine CDX2 ChIP-seq in mouse jejunum villus cells 18 GSM613387 IntestineEpi_WT 0 The Rockefeller University 2010-10-27 [HT Sequencing] Illumina Genome Analyzer II (Mus musculus) (GPL9250) SRA Mus musculus intestine Small Intestine Epithelium 19 GSM613388 IntestineEpi_APOBEC1 0 The Rockefeller University 2010-10-27 [HT Sequencing] Illumina Genome Analyzer II (Mus musculus) (GPL9250) SRA Mus musculus intestine Small Intestine Epithelium 20 GSM658400 mouse_colon_control_short_1 0 Whitehead Institute 2011-01-20 [HT Sequencing] Illumina Genome Analyzer II (Mus musculus) (GPL9250) SRA Mus musculus colon colon 1   |   2   |   3   |   4   |   5      »      [230]