Gene Expression Omnibus (GEO) Overview Version:2014-04-12Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.

Warning: mysqli_query() [function.mysqli-query]: (HY000/5): Out of memory (Needed 324696 bytes) in /opt/services/nig/geo/www-e/webapp/lib/DataAccessMysql.php on line 53

Warning: mysqli_fetch_array() expects parameter 1 to be mysqli_result, boolean given in /opt/services/nig/geo/www-e/webapp/lib/DataAccessMysql.php on line 57

Warning: mysqli_query() [function.mysqli-query]: (HY000/5): Out of memory (Needed 324696 bytes) in /opt/services/nig/geo/www-e/webapp/lib/DataAccessMysql.php on line 53

Warning: mysqli_fetch_array() expects parameter 1 to be mysqli_result, boolean given in /opt/services/nig/geo/www-e/webapp/lib/DataAccessMysql.php on line 57

Warning: mysqli_query() [function.mysqli-query]: (HY000/5): Out of memory (Needed 324696 bytes) in /opt/services/nig/geo/www-e/webapp/lib/DataAccessMysql.php on line 53

Warning: mysqli_fetch_array() expects parameter 1 to be mysqli_result, boolean given in /opt/services/nig/geo/www-e/webapp/lib/DataAccessMysql.php on line 57

Warning: mysqli_query() [function.mysqli-query]: (HY000/5): Out of memory (Needed 324696 bytes) in /opt/services/nig/geo/www-e/webapp/lib/DataAccessMysql.php on line 53

Warning: mysqli_fetch_array() expects parameter 1 to be mysqli_result, boolean given in /opt/services/nig/geo/www-e/webapp/lib/DataAccessMysql.php on line 57

Warning: mysqli_query() [function.mysqli-query]: (HY000/5): Out of memory (Needed 324696 bytes) in /opt/services/nig/geo/www-e/webapp/lib/DataAccessMysql.php on line 53

Warning: mysqli_fetch_array() expects parameter 1 to be mysqli_result, boolean given in /opt/services/nig/geo/www-e/webapp/lib/DataAccessMysql.php on line 57

Warning: mysqli_query() [function.mysqli-query]: (HY000/5): Out of memory (Needed 324696 bytes) in /opt/services/nig/geo/www-e/webapp/lib/DataAccessMysql.php on line 53

Warning: mysqli_fetch_array() expects parameter 1 to be mysqli_result, boolean given in /opt/services/nig/geo/www-e/webapp/lib/DataAccessMysql.php on line 57

Warning: mysqli_query() [function.mysqli-query]: (HY000/5): Out of memory (Needed 324696 bytes) in /opt/services/nig/geo/www-e/webapp/lib/DataAccessMysql.php on line 53

Warning: mysqli_fetch_array() expects parameter 1 to be mysqli_result, boolean given in /opt/services/nig/geo/www-e/webapp/lib/DataAccessMysql.php on line 57

Warning: mysqli_query() [function.mysqli-query]: (HY000/5): Out of memory (Needed 324696 bytes) in /opt/services/nig/geo/www-e/webapp/lib/DataAccessMysql.php on line 53

Warning: mysqli_fetch_array() expects parameter 1 to be mysqli_result, boolean given in /opt/services/nig/geo/www-e/webapp/lib/DataAccessMysql.php on line 57

Warning: mysqli_query() [function.mysqli-query]: (HY000/5): Out of memory (Needed 324696 bytes) in /opt/services/nig/geo/www-e/webapp/lib/DataAccessMysql.php on line 53

Warning: mysqli_fetch_array() expects parameter 1 to be mysqli_result, boolean given in /opt/services/nig/geo/www-e/webapp/lib/DataAccessMysql.php on line 57

Warning: mysqli_query() [function.mysqli-query]: (HY000/5): Out of memory (Needed 324696 bytes) in /opt/services/nig/geo/www-e/webapp/lib/DataAccessMysql.php on line 53

Warning: mysqli_fetch_array() expects parameter 1 to be mysqli_result, boolean given in /opt/services/nig/geo/www-e/webapp/lib/DataAccessMysql.php on line 57
RSS
Data Unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(615,734)
  Primates
(5,814)
  Rodents
(225,055)
  Mammals
(20,968)
  Vertebrates
(22,581)
  Invertebrates
(46,584)
  Plants
(107,706)
  Bacteria
(45,091)
  Viruses
(1,432)
  Phages
(112)
  Unclassified
(6,986)
  All
(1,101,311)
 
  SAGE NlaIII
(718)
  SAGE RsaI
(3)
  SAGE Sau3A
(37)
  MPSS
(100)
  GeneChip
(108,928)
  Tiling Array
(2,164)
  cDNA Array
(11,311)
  Oligo Array
(0)
  Bead Array
(0)
  Protein Array
(0)
  Antibody
(28)
  RT-PCR
(1,166)
  HT-Seq
(0)
  Other
(968)
  All
(225,055)
 
  brain
(0)
  blood
(0)
  connective
(0)
  reproductive
(8,338)
  muscular
(14,417)
  digestive
(5,405)
  liver
(0)
  lung
(10,598)
  urinary
(5,877)
  endo/exo-crine
(0)
  embryo
(10,361)
  adult aerial structure
(0)
  young aerial structure
(0)
  root
(0)
  meristem/growing tissue
(0)
  flower/sexual organ
(0)
  seed/fruit/grain
(0)
  pooled
(0)
  unclassified
(0)
  all
(225,055)
 
1   |   2   |   3   |   4   |   5      »      [271]
Sample ID Title Number of Data Institute Submission date Platform Sample type Species Organ class Reasoning of the classification
Keywords used for the classification are shown with bold font.
1 GSM1018828 Lgr5(hi) H3K79me2_ChIPSeq 0 Dana-Farber Cancer Institute 2012-10-12 [HT Sequencing] Illumina Genome Analyzer (Mus musculus) (GPL9185) SRA Mus musculus
Mus musculus
intestine intestinal Lgr5(hi) stem cells
2 GSM1018829 Lgr5(hi) input DNA 0 Dana-Farber Cancer Institute 2012-10-12 [HT Sequencing] Illumina Genome Analyzer (Mus musculus) (GPL9185) SRA Mus musculus
Mus musculus
intestine intestinal Lgr5(hi) stem cells
3 GSM1018830 villus H3K79me2_ChIPSeq 0 Dana-Farber Cancer Institute 2012-10-12 [HT Sequencing] Illumina Genome Analyzer (Mus musculus) (GPL9185) SRA Mus musculus
Mus musculus
intestine intestinal villus cells
4 GSM1018831 viillus input DNA 0 Dana-Farber Cancer Institute 2012-10-12 [HT Sequencing] Illumina Genome Analyzer (Mus musculus) (GPL9185) SRA Mus musculus
Mus musculus
intestine intestinal villus cells
5 GSM1020641 mouse_a_colon 0 MIT 2012-10-17 [HT Sequencing] Illumina HiSeq 2000 (Mus musculus) (GPL13112) SRA Mus musculus
Mus musculus
colon mouse_colon
6 GSM1020650 mouse_b_colon 0 MIT 2012-10-17 [HT Sequencing] Illumina HiSeq 2000 (Mus musculus) (GPL13112) SRA Mus musculus
Mus musculus
colon mouse_colon
7 GSM1020658 mouse_c_colon 0 MIT 2012-10-17 [HT Sequencing] Illumina HiSeq 2000 (Mus musculus) (GPL13112) SRA Mus musculus
Mus musculus
colon mouse_colon
8 GSM1020667 rat_a_colon 0 MIT 2012-10-17 [HT Sequencing] Illumina HiSeq 2000 (Rattus norvegicus) (GPL14844) SRA Rattus norvegicus
Rattus norvegicus
colon rat_colon
9 GSM1020676 rat_b_colon 0 MIT 2012-10-17 [HT Sequencing] Illumina HiSeq 2000 (Rattus norvegicus) (GPL14844) SRA Rattus norvegicus
Rattus norvegicus
colon rat_colon
10 GSM1020685 rat_c_colon 0 MIT 2012-10-17 [HT Sequencing] Illumina HiSeq 2000 (Rattus norvegicus) (GPL14844) SRA Rattus norvegicus
Rattus norvegicus
colon rat_colon
11 GSM1023015 Dot1l_wildtype 0 Dana-Farber Cancer Institute 2012-10-19 [HT Sequencing] Illumina HiSeq 2000 (Mus musculus) (GPL13112) SRA Mus musculus
Mus musculus
intestine intestinal villus epithelium, wildtype
12 GSM1023016 Dot1l_mutant 0 Dana-Farber Cancer Institute 2012-10-19 [HT Sequencing] Illumina HiSeq 2000 (Mus musculus) (GPL13112) SRA Mus musculus
Mus musculus
intestine intestinal villus epithelium, Dot1l mutant
13 GSM1051152 mouse colon 0 University of California, San Diego 2012-12-10 [HT Sequencing] Illumina HiSeq 2000 (Mus musculus) (GPL13112) SRA Mus musculus
Mus musculus
colon mouse colon
14 GSM1051155 mouse intestine 0 University of California, San Diego 2012-12-10 [HT Sequencing] Illumina HiSeq 2000 (Mus musculus) (GPL13112) SRA Mus musculus
Mus musculus
intestine mouse intestine
15 GSM1051164 mouse stomach 0 University of California, San Diego 2012-12-10 [HT Sequencing] Illumina HiSeq 2000 (Mus musculus) (GPL13112) SRA Mus musculus
Mus musculus
stomach mouse stomach
16 GSM1083970 Mouse Ileum 0 EPFL 2013-02-15 [HT Sequencing] Illumina HiSeq 2000 (Mus musculus) (GPL13112) SRA Mus musculus
Mus musculus
intestine Ileum
17 GSM1083971 Mouse Colon 0 EPFL 2013-02-15 [HT Sequencing] Illumina HiSeq 2000 (Mus musculus) (GPL13112) SRA Mus musculus
Mus musculus
colon Colon
18 GSM1126400 BC05 PB5 0 Ludwig-Maximilians-Universität München 2013-04-18 [HT Sequencing] Illumina HiSeq 2000 (Mus musculus) (GPL13112) SRA Mus musculus
Mus musculus
intestine tumor, intestine
19 GSM1126401 BC05 PB3 0 Ludwig-Maximilians-Universität München 2013-04-18 [HT Sequencing] Illumina HiSeq 2000 (Mus musculus) (GPL13112) SRA Mus musculus
Mus musculus
intestine tumor, intestine
20 GSM1155642 1119_NM 0 Icahn School of Medicine at Mount Sinai 2013-06-07 [HT Sequencing] Illumina HiSeq 2000 (Mus musculus) (GPL13112) SRA Mus musculus
Mus musculus
colon Normal surrounding (distal) cecum tissue from HBUS mouse 1119
1   |   2   |   3   |   4   |   5      »      [271]