Gene Expression Omnibus (GEO) Overview Version´╝Ü2014-04-12Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.

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Data Unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(615,734)
  Primates
(5,814)
  Rodents
(225,055)
  Mammals
(20,968)
  Vertebrates
(22,581)
  Invertebrates
(46,584)
  Plants
(107,706)
  Bacteria
(45,091)
  Viruses
(1,432)
  Phages
(112)
  Unclassified
(6,986)
  All
(1,101,311)
 
  SAGE NlaIII
(718)
  SAGE RsaI
(3)
  SAGE Sau3A
(37)
  MPSS
(100)
  GeneChip
(108,928)
  Tiling Array
(2,164)
  cDNA Array
(11,311)
  Oligo Array
(60,928)
  Bead Array
(21,037)
  Protein Array
(0)
  Antibody
(28)
  RT-PCR
(1,166)
  HT-Seq
(17,667)
  Other
(968)
  All
(225,055)
 
  brain
(0)
  blood
(0)
  connective
(0)
  reproductive
(8,338)
  muscular
(14,417)
  digestive
(5,405)
  liver
(0)
  lung
(10,598)
  urinary
(5,877)
  endo/exo-crine
(0)
  embryo
(10,361)
  adult aerial structure
(0)
  young aerial structure
(0)
  root
(0)
  meristem/growing tissue
(0)
  flower/sexual organ
(0)
  seed/fruit/grain
(0)
  pooled
(0)
  unclassified
(0)
  all
(225,055)
 
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Sample ID Title Number of Data Institute Submission date Platform Sample type Species Organ class Reasoning of the classification
Keywords used for the classification are shown with bold font.
1 GSM14837 MouseU74_H1 12,488 Yale University School of Medicine 2004-01-06 [GeneChip] [MG_U74Av2] Affymetrix Murine Genome U74A Version 2 Array (GPL81) RNA Mastomys natalensis
Mastomys natalensis
stomach Stomach-gastric mucosa
2 GSM14838 MouseU74_H2 12,488 Yale University School of Medicine 2004-01-06 [GeneChip] [MG_U74Av2] Affymetrix Murine Genome U74A Version 2 Array (GPL81) RNA Mastomys natalensis
Mastomys natalensis
stomach Gastric Mucosa
3 GSM14839 MouseU74_T1 12,488 Yale University School of Medicine 2004-01-06 [GeneChip] [MG_U74Av2] Affymetrix Murine Genome U74A Version 2 Array (GPL81) RNA Mastomys natalensis
Mastomys natalensis
stomach Gastric mucosa
4 GSM14840 Mouseu74_T2 12,488 Yale University School of Medicine 2004-01-06 [GeneChip] [MG_U74Av2] Affymetrix Murine Genome U74A Version 2 Array (GPL81) RNA Mastomys natalensis
Mastomys natalensis
stomach Gastric mucosa
5 GSM14841 RatU34_H1 8,799 Yale University School of Medicine 2004-01-06 [GeneChip] [RG_U34A] Affymetrix Rat Genome U34 Array (GPL85) RNA Mastomys natalensis
Mastomys natalensis
stomach Gastric ECL cells
6 GSM14842 RatU34_T1 8,799 Yale University School of Medicine 2004-01-06 [GeneChip] [RG_U34A] Affymetrix Rat Genome U34 Array (GPL85) RNA Mastomys natalensis
Mastomys natalensis
stomach Gastric mucosa
7 GSM14843 RatU34_S1 8,799 Yale University School of Medicine 2004-01-06 [GeneChip] [RG_U34A] Affymetrix Rat Genome U34 Array (GPL85) RNA Mastomys natalensis
Mastomys natalensis
stomach Gastric mucosa
8 GSM400405 intestine large 10 1,201,338 Genomics Institute of the Novartis Research Foundation 2009-05-06 [GeneChip] [MoEx-1_0-st] Affymetrix Mouse Exon 1.0 ST Array [probe set (exon) version] (GPL6193) RNA Mus musculus
Mus musculus
intestine intestine_large
9 GSM400406 intestine large 11 1,201,338 Genomics Institute of the Novartis Research Foundation 2009-05-06 [GeneChip] [MoEx-1_0-st] Affymetrix Mouse Exon 1.0 ST Array [probe set (exon) version] (GPL6193) RNA Mus musculus
Mus musculus
intestine intestine_large
10 GSM400416 intestine small 21 1,201,338 Genomics Institute of the Novartis Research Foundation 2009-05-06 [GeneChip] [MoEx-1_0-st] Affymetrix Mouse Exon 1.0 ST Array [probe set (exon) version] (GPL6193) RNA Mus musculus
Mus musculus
intestine intestine_small
11 GSM400417 intestine small 22 1,201,338 Genomics Institute of the Novartis Research Foundation 2009-05-06 [GeneChip] [MoEx-1_0-st] Affymetrix Mouse Exon 1.0 ST Array [probe set (exon) version] (GPL6193) RNA Mus musculus
Mus musculus
intestine intestine_small
12 GSM400418 stomach 23 1,201,338 Genomics Institute of the Novartis Research Foundation 2009-05-06 [GeneChip] [MoEx-1_0-st] Affymetrix Mouse Exon 1.0 ST Array [probe set (exon) version] (GPL6193) RNA Mus musculus
Mus musculus
stomach stomach
13 GSM400419 stomach 24 1,201,338 Genomics Institute of the Novartis Research Foundation 2009-05-06 [GeneChip] [MoEx-1_0-st] Affymetrix Mouse Exon 1.0 ST Array [probe set (exon) version] (GPL6193) RNA Mus musculus
Mus musculus
stomach stomach
14 GSM857376 Intestine_KO_day8_1 [exon-level] 1,180,331 Johns Hopkins University School of Medicine 2012-01-06 [GeneChip] [MoEx-1_0-st] Affymetrix Mouse Exon 1.0 ST Array [probe set (exon) version] (GPL6193) RNA Mus musculus
Mus musculus
intestine small intestine (jejunum)
15 GSM857377 Intestine_KO_day8_2 [exon-level] 1,180,331 Johns Hopkins University School of Medicine 2012-01-06 [GeneChip] [MoEx-1_0-st] Affymetrix Mouse Exon 1.0 ST Array [probe set (exon) version] (GPL6193) RNA Mus musculus
Mus musculus
intestine small intestine (jejunum)
16 GSM857378 Intestine_KO_day8_3 [exon-level] 1,180,331 Johns Hopkins University School of Medicine 2012-01-06 [GeneChip] [MoEx-1_0-st] Affymetrix Mouse Exon 1.0 ST Array [probe set (exon) version] (GPL6193) RNA Mus musculus
Mus musculus
intestine small intestine (jejunum)
17 GSM857379 Intestine_ctrl_day8_1 [exon-level] 1,180,331 Johns Hopkins University School of Medicine 2012-01-06 [GeneChip] [MoEx-1_0-st] Affymetrix Mouse Exon 1.0 ST Array [probe set (exon) version] (GPL6193) RNA Mus musculus
Mus musculus
intestine small intestine (jejunum)
18 GSM857380 Intestine_ctrl_day8_2 [exon-level] 1,180,331 Johns Hopkins University School of Medicine 2012-01-06 [GeneChip] [MoEx-1_0-st] Affymetrix Mouse Exon 1.0 ST Array [probe set (exon) version] (GPL6193) RNA Mus musculus
Mus musculus
intestine small intestine (jejunum)
19 GSM857381 Intestine_ctrl_day8_3 [exon-level] 1,180,331 Johns Hopkins University School of Medicine 2012-01-06 [GeneChip] [MoEx-1_0-st] Affymetrix Mouse Exon 1.0 ST Array [probe set (exon) version] (GPL6193) RNA Mus musculus
Mus musculus
intestine small intestine (jejunum)
20 GSM1011017 wildtype_male_mouse_colon_litter1 330,190 Karolinska Institute 2012-09-28 [GeneChip] MoEx-1_0-st Mus musculus ENSE version 14 (GPL16116) RNA Mus musculus
Mus musculus
colon Colon
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