Gene Expression Omnibus (GEO) Overview Version：2013-04-06Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data Unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(502,421)		   Primates
(4,928)		   Rodents
(181,106)		   Mammals
(16,260)		   Vertebrates
(18,263)		   Invertebrates
(37,338)		   Plants
(91,454)		   Bacteria
(39,082)		   Viruses
(1,266)		   Phages
(101)		   Unclassified
(5,242)		   All
(898,944)		  
  SAGE NlaIII
(718)		   SAGE RsaI
(3)		   SAGE Sau3A
(37)		   MPSS
(100)		   GeneChip
(89,973)		   Tiling Array
(2,000)		   cDNA Array
(11,116)		   Oligo Array
(53,181)		   Bead Array
(13,914)		   Protein Array
(0)		   Antibody
(22)		   RT-PCR
(885)		   HT-Seq
(8,762)		   Other
(395)		   All
(181,106)		  
  brain
(27,644)		   blood
(21,024)		   connective
(11,488)		   reproductive
(6,618)		   muscular
(11,970)		   digestive
(4,585)		   liver
(30,267)		   lung
(8,052)		   urinary
(4,873)		   endo/exo-crine
(5,381)		   embryo
(7,581)		   adult aerial structure
(0)		   young aerial structure
(0)		   root
(0)		   meristem/growing tissue
(0)		   flower/sexual organ
(0)		   seed/fruit/grain
(0)		   pooled
(9,138)		   unclassified
(32,485)		   all
(181,106)		  
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Sample ID Title Number of Data Institute Submission date Platform Sample type Species Organ class Reasoning of the classification
Keywords used for the classification are shown with bold font.
1 GSM278717 Low calcium, Colon mucosa, HLAB27, repl 1 45,018 NIZO food research 2008-04-02 [Oligo Array] Agilent-014879 Whole Rat Genome Microarray 4x44K G4131F (Feature Number version) (GPL4135) RNA Rattus norvegicus
Rattus norvegicus		 colon Colon mucosa, HLAB27, repl 1 Reference RNA. This consists of a pool of equal molar total RNA samples of all groups analyzed.
2 GSM278718 High calcium, Colon mucosa, HLAB27, repl 3 45,018 NIZO food research 2008-04-02 [Oligo Array] Agilent-014879 Whole Rat Genome Microarray 4x44K G4131F (Feature Number version) (GPL4135) RNA Rattus norvegicus
Rattus norvegicus		 colon Colon mucosa, HLAB27, repl 3 Reference RNA. This consists of a pool of equal molar total RNA samples of all groups analyzed.
3 GSM278719 Low calcium, Colon mucosa, HLAB27, repl 4 45,018 NIZO food research 2008-04-02 [Oligo Array] Agilent-014879 Whole Rat Genome Microarray 4x44K G4131F (Feature Number version) (GPL4135) RNA Rattus norvegicus
Rattus norvegicus		 colon Colon mucosa, HLAB27, repl 4 Reference RNA. This consists of a pool of equal molar total RNA samples of all groups analyzed.
4 GSM278720 Low calcium, Colon mucosa, HLAB27, repl 5 45,018 NIZO food research 2008-04-02 [Oligo Array] Agilent-014879 Whole Rat Genome Microarray 4x44K G4131F (Feature Number version) (GPL4135) RNA Rattus norvegicus
Rattus norvegicus		 colon Colon mucosa, HLAB27, repl 5 Reference RNA. This consists of a pool of equal molar total RNA samples of all groups analyzed.
5 GSM278721 Low calcium, Colon mucosa, HLAB27, repl 6 45,018 NIZO food research 2008-04-02 [Oligo Array] Agilent-014879 Whole Rat Genome Microarray 4x44K G4131F (Feature Number version) (GPL4135) RNA Rattus norvegicus
Rattus norvegicus		 colon Colon mucosa, HLAB27, repl 6 Reference RNA. This consists of a pool of equal molar total RNA samples of all groups analyzed.
6 GSM278722 Low calcium, Colon mucosa, HLAB27, repl 7 45,018 NIZO food research 2008-04-02 [Oligo Array] Agilent-014879 Whole Rat Genome Microarray 4x44K G4131F (Feature Number version) (GPL4135) RNA Rattus norvegicus
Rattus norvegicus		 colon Colon mucosa, HLAB27, repl 7 Reference RNA. This consists of a pool of equal molar total RNA samples of all groups analyzed.
7 GSM278723 Low calcium, Colon mucosa, HLAB27, repl 8 45,018 NIZO food research 2008-04-02 [Oligo Array] Agilent-014879 Whole Rat Genome Microarray 4x44K G4131F (Feature Number version) (GPL4135) RNA Rattus norvegicus
Rattus norvegicus		 colon Colon mucosa, HLAB27, repl 8 Reference RNA. This consists of a pool of equal molar total RNA samples of all groups analyzed.
8 GSM278724 High calcium, Colon mucosa, HLAB27, repl 9 45,018 NIZO food research 2008-04-02 [Oligo Array] Agilent-014879 Whole Rat Genome Microarray 4x44K G4131F (Feature Number version) (GPL4135) RNA Rattus norvegicus
Rattus norvegicus		 colon Colon mucosa, HLAB27, repl 9 Reference RNA. This consists of a pool of equal molar total RNA samples of all groups analyzed.
9 GSM278725 High calcium, Colon mucosa, HLAB27, repl 10 45,018 NIZO food research 2008-04-02 [Oligo Array] Agilent-014879 Whole Rat Genome Microarray 4x44K G4131F (Feature Number version) (GPL4135) RNA Rattus norvegicus
Rattus norvegicus		 colon Colon mucosa, HLAB27, repl 10 Reference RNA. This consists of a pool of equal molar total RNA samples of all groups analyzed.
10 GSM278726 Low calcium, Colon mucosa, HLAB27, repl 11 45,018 NIZO food research 2008-04-02 [Oligo Array] Agilent-014879 Whole Rat Genome Microarray 4x44K G4131F (Feature Number version) (GPL4135) RNA Rattus norvegicus
Rattus norvegicus		 colon Colon mucosa, HLAB27, repl 11 Reference RNA. This consists of a pool of equal molar total RNA samples of all groups analyzed.
11 GSM278727 High calcium, Colon mucosa, HLAB27, repl 13 45,018 NIZO food research 2008-04-02 [Oligo Array] Agilent-014879 Whole Rat Genome Microarray 4x44K G4131F (Feature Number version) (GPL4135) RNA Rattus norvegicus
Rattus norvegicus		 colon Colon mucosa, HLAB27, repl 13 Reference RNA. This consists of a pool of equal molar total RNA samples of all groups analyzed.
12 GSM278728 High calcium, Colon mucosa, HLAB27, repl 14 45,018 NIZO food research 2008-04-02 [Oligo Array] Agilent-014879 Whole Rat Genome Microarray 4x44K G4131F (Feature Number version) (GPL4135) RNA Rattus norvegicus
Rattus norvegicus		 colon Colon mucosa, HLAB27, repl 14 Reference RNA. This consists of a pool of equal molar total RNA samples of all groups analyzed.
13 GSM278729 Low calcium, Colon mucosa, HLAB27, repl 15 45,018 NIZO food research 2008-04-02 [Oligo Array] Agilent-014879 Whole Rat Genome Microarray 4x44K G4131F (Feature Number version) (GPL4135) RNA Rattus norvegicus
Rattus norvegicus		 colon Colon mucosa, HLAB27, repl 15 Reference RNA. This consists of a pool of equal molar total RNA samples of all groups analyzed.
14 GSM278730 Low calcium, Colon mucosa, HLAB27, repl 16 45,018 NIZO food research 2008-04-02 [Oligo Array] Agilent-014879 Whole Rat Genome Microarray 4x44K G4131F (Feature Number version) (GPL4135) RNA Rattus norvegicus
Rattus norvegicus		 colon Colon mucosa, HLAB27, repl 16 Reference RNA. This consists of a pool of equal molar total RNA samples of all groups analyzed.
15 GSM278731 High calcium, Colon mucosa, HLAB27, repl 17 45,018 NIZO food research 2008-04-02 [Oligo Array] Agilent-014879 Whole Rat Genome Microarray 4x44K G4131F (Feature Number version) (GPL4135) RNA Rattus norvegicus
Rattus norvegicus		 colon Colon mucosa, HLAB27, repl 17 Reference RNA. This consists of a pool of equal molar total RNA samples of all groups analyzed.
16 GSM278732 High calcium, Colon mucosa, HLAB27, repl 18 45,018 NIZO food research 2008-04-02 [Oligo Array] Agilent-014879 Whole Rat Genome Microarray 4x44K G4131F (Feature Number version) (GPL4135) RNA Rattus norvegicus
Rattus norvegicus		 colon Colon mucosa, HLAB27, repl 18 Reference RNA. This consists of a pool of equal molar total RNA samples of all groups analyzed.
17 GSM278856 High calcium, Colon mucosa, HLAB27, repl 2 45,018 NIZO food research 2008-04-02 [Oligo Array] Agilent-014879 Whole Rat Genome Microarray 4x44K G4131F (Feature Number version) (GPL4135) RNA Rattus norvegicus
Rattus norvegicus		 colon Colon mucosa, HLAB27, repl 2 Reference RNA. This consists of a pool of equal molar total RNA samples of all groups analyzed.
18 GSM641377 Conventionally raised rat Inulin diet replicate 1 45,018 AgResearch Ltd 2010-12-16 [Oligo Array] Agilent-014879 Whole Rat Genome Microarray 4x44K G4131F (Feature Number version) (GPL4135) RNA Rattus norvegicus
Rattus norvegicus		 colon Biological replicate 1 of 5, colon tissue
19 GSM641378 Conventionally raised rat Konjac flour diet replicate 1 45,018 AgResearch Ltd 2010-12-16 [Oligo Array] Agilent-014879 Whole Rat Genome Microarray 4x44K G4131F (Feature Number version) (GPL4135) RNA Rattus norvegicus
Rattus norvegicus		 colon Biological replicate 1 of 6, colon tissue
20 GSM641379 Conventionally raised rat Resistant starch diet replicate 1 45,018 AgResearch Ltd 2010-12-16 [Oligo Array] Agilent-014879 Whole Rat Genome Microarray 4x44K G4131F (Feature Number version) (GPL4135) RNA Rattus norvegicus
Rattus norvegicus		 colon Biological replicate 1 of 6, colon tissue
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