Gene Expression Omnibus (GEO) Overview Version：2013-04-06Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data Unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(502,421)		   Primates
(4,928)		   Rodents
(181,106)		   Mammals
(16,260)		   Vertebrates
(18,263)		   Invertebrates
(37,338)		   Plants
(91,454)		   Bacteria
(39,082)		   Viruses
(1,266)		   Phages
(101)		   Unclassified
(5,242)		   All
(898,944)		  
  SAGE NlaIII
(718)		   SAGE RsaI
(3)		   SAGE Sau3A
(37)		   MPSS
(100)		   GeneChip
(89,973)		   Tiling Array
(2,000)		   cDNA Array
(11,116)		   Oligo Array
(53,181)		   Bead Array
(13,914)		   Protein Array
(0)		   Antibody
(22)		   RT-PCR
(885)		   HT-Seq
(8,762)		   Other
(395)		   All
(181,106)		  
  brain
(27,644)		   blood
(21,024)		   connective
(11,488)		   reproductive
(6,618)		   muscular
(11,970)		   digestive
(4,585)		   liver
(30,267)		   lung
(8,052)		   urinary
(4,873)		   endo/exo-crine
(5,381)		   embryo
(7,581)		   adult aerial structure
(0)		   young aerial structure
(0)		   root
(0)		   meristem/growing tissue
(0)		   flower/sexual organ
(0)		   seed/fruit/grain
(0)		   pooled
(9,138)		   unclassified
(32,485)		   all
(181,106)		  
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Sample ID Title Number of Data Institute Submission date Platform Sample type Species Organ class Reasoning of the classification
Keywords used for the classification are shown with bold font.
1 GSM113347 Zymogenic Cells, Gastric from Laser Capture Microdissection 45,101 Washington University 2006-06-07 [GeneChip] [Mouse430_2] Affymetrix Mouse Genome 430 2.0 Array (GPL1261) RNA Mus musculus
Mus musculus		 stomach Murine Zymogenic Cells, Gastric from Laser Capture Microdissection
2 GSM11903 ZF6B7 12,488 Univ Kansas Med Ctr 2003-10-21 [GeneChip] [MG_U74Av2] Affymetrix Murine Genome U74A Version 2 Array (GPL81) RNA Mus musculus
Mus musculus		 intestine Small intestine
3 GSM1018439 Yap cKO 3 35,556 Children's Hospital Boston 2012-10-11 [GeneChip] [MoGene-1_0-st] Affymetrix Mouse Gene 1.0 ST Array [transcript (gene) version] (GPL6246) RNA Mus musculus
Mus musculus		 intestine Mouse intestinal epithelium cKO 3
4 GSM1018438 Yap cKO 2 35,556 Children's Hospital Boston 2012-10-11 [GeneChip] [MoGene-1_0-st] Affymetrix Mouse Gene 1.0 ST Array [transcript (gene) version] (GPL6246) RNA Mus musculus
Mus musculus		 intestine Mouse intestinal epithelium cKO 2
5 GSM1018437 Yap cKO 1 35,556 Children's Hospital Boston 2012-10-11 [GeneChip] [MoGene-1_0-st] Affymetrix Mouse Gene 1.0 ST Array [transcript (gene) version] (GPL6246) RNA Mus musculus
Mus musculus		 intestine Mouse intestinal epithelium cKO 1
6 GSM467446 WT_Untr_5 20,778 Indiana University School of Medicine-Northwest 2009-11-03 [GeneChip] [MoGene-1_0-st] Affymetrix Mouse Gene 1.0 ST Array [transcript (gene) version] (GPL6246) RNA Mus musculus
Mus musculus		 colon Colon RNA, untreated
7 GSM467445 WT_Untr_4 20,778 Indiana University School of Medicine-Northwest 2009-11-03 [GeneChip] [MoGene-1_0-st] Affymetrix Mouse Gene 1.0 ST Array [transcript (gene) version] (GPL6246) RNA Mus musculus
Mus musculus		 colon Colon RNA, untreated
8 GSM467444 WT_Untr_3 20,778 Indiana University School of Medicine-Northwest 2009-11-03 [GeneChip] [MoGene-1_0-st] Affymetrix Mouse Gene 1.0 ST Array [transcript (gene) version] (GPL6246) RNA Mus musculus
Mus musculus		 colon Colon RNA, untreated
9 GSM467443 WT_Untr_2 20,778 Indiana University School of Medicine-Northwest 2009-11-03 [GeneChip] [MoGene-1_0-st] Affymetrix Mouse Gene 1.0 ST Array [transcript (gene) version] (GPL6246) RNA Mus musculus
Mus musculus		 colon Colon RNA, untreated
10 GSM467442 WT_Untr_1 20,778 Indiana University School of Medicine-Northwest 2009-11-03 [GeneChip] [MoGene-1_0-st] Affymetrix Mouse Gene 1.0 ST Array [transcript (gene) version] (GPL6246) RNA Mus musculus
Mus musculus		 colon Colon RNA, untreated
11 GSM269603 WT_pool 45,101 Cincinnati Children's Hospital 2008-02-27 [GeneChip] [Mouse430_2] Affymetrix Mouse Genome 430 2.0 Array (GPL1261) RNA Mus musculus
Mus musculus		 intestine small intestine from WT mice
12 GSM242094 WT_normal_62 22,690 ErasmusMC 2007-11-10 [GeneChip] [MOE430A] Affymetrix Mouse Expression 430A Array (GPL339) RNA Mus musculus
Mus musculus		 intestine C57Bl6/J, normal intestinal epithelial cells
13 GSM242093 WT_normal_36 22,690 ErasmusMC 2007-11-10 [GeneChip] [MOE430A] Affymetrix Mouse Expression 430A Array (GPL339) RNA Mus musculus
Mus musculus		 intestine C57Bl6/J, normal intestinal epithelial cells
14 GSM614710 WT_Jej_6h_5 45,101 BiogenIdec, Inc. 2010-10-29 [GeneChip] [Mouse430_2] Affymetrix Mouse Genome 430 2.0 Array (GPL1261) RNA Mus musculus
Mus musculus		 intestine Jejunum
15 GSM614707 WT_Jej_6h_4 45,101 BiogenIdec, Inc. 2010-10-29 [GeneChip] [Mouse430_2] Affymetrix Mouse Genome 430 2.0 Array (GPL1261) RNA Mus musculus
Mus musculus		 intestine Jejunum
16 GSM614704 WT_Jej_6h_3 45,101 BiogenIdec, Inc. 2010-10-29 [GeneChip] [Mouse430_2] Affymetrix Mouse Genome 430 2.0 Array (GPL1261) RNA Mus musculus
Mus musculus		 intestine Jejunum
17 GSM614701 WT_Jej_6h_2 45,101 BiogenIdec, Inc. 2010-10-29 [GeneChip] [Mouse430_2] Affymetrix Mouse Genome 430 2.0 Array (GPL1261) RNA Mus musculus
Mus musculus		 intestine Jejunum
18 GSM614698 WT_Jej_6h_1 45,101 BiogenIdec, Inc. 2010-10-29 [GeneChip] [Mouse430_2] Affymetrix Mouse Genome 430 2.0 Array (GPL1261) RNA Mus musculus
Mus musculus		 intestine Jejunum
19 GSM614708 WT_Jej_24h_4 45,101 BiogenIdec, Inc. 2010-10-29 [GeneChip] [Mouse430_2] Affymetrix Mouse Genome 430 2.0 Array (GPL1261) RNA Mus musculus
Mus musculus		 intestine Jejunum
20 GSM614705 WT_Jej_24h_3 45,101 BiogenIdec, Inc. 2010-10-29 [GeneChip] [Mouse430_2] Affymetrix Mouse Genome 430 2.0 Array (GPL1261) RNA Mus musculus
Mus musculus		 intestine Jejunum
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