Gene Expression Omnibus (GEO) Overview Version：2013-04-06Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data Unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(1,802)		   Primates
(0)		   Rodents
(674)		   Mammals
(18)		   Vertebrates
(0)		   Invertebrates
(168)		   Plants
(445)		   Bacteria
(34)		   Viruses
(0)		   Phages
(0)		   Unclassified
(47)		   All
(3,224)		  
  SAGE NlaIII
(0)		   SAGE RsaI
(0)		   SAGE Sau3A
(0)		   MPSS
(0)		   GeneChip
(207)		   Tiling Array
(102)		   cDNA Array
(47)		   Oligo Array
(173)		   Bead Array
(0)		   Protein Array
(0)		   Antibody
(0)		   RT-PCR
(0)		   HT-Seq
(145)		   Other
(0)		   All
(674)		  
  brain
(35)		   blood
(168)		   connective
(40)		   reproductive
(17)		   muscular
(12)		   digestive
(19)		   liver
(73)		   lung
(6)		   urinary
(8)		   endo/exo-crine
(0)		   embryo
(51)		   adult aerial structure
(0)		   young aerial structure
(0)		   root
(0)		   meristem/growing tissue
(0)		   flower/sexual organ
(0)		   seed/fruit/grain
(0)		   pooled
(18)		   unclassified
(227)		   all
(674)		  
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Sample ID Title Number of Data Institute Submission date Platform Sample type Species Organ class Reasoning of the classification
Keywords used for the classification are shown with bold font.
1 GSM1017448 Airn wildtype 392,778 CeMM 2012-10-10 [Oligo Array] NimbleGen custom Mouse MIRTA Array (GPL11618) mixed Mus musculus
Mus musculus		 unclassified source_name:wildtype 5d differentiated D3 ESCs wildtype D3 ESCs_sonicated genomic DNA title:Airn wildtype
2 GSM1017449 Airn 3kb truncation 392,778 CeMM 2012-10-10 [Oligo Array] NimbleGen custom Mouse MIRTA Array (GPL11618) mixed Mus musculus
Mus musculus		 unclassified source_name:Airn T3 5d differentiated D3 ESCs wildtype D3 ESCs_sonicated genomic DNA title:Airn 3kb truncation
3 GSM1017450 Airn 16kb truncation 392,778 CeMM 2012-10-10 [Oligo Array] NimbleGen custom Mouse MIRTA Array (GPL11618) mixed Mus musculus
Mus musculus		 unclassified source_name:Airn T16 5d differentiated D3 ESCs wildtype D3 ESCs_sonicated genomic DNA title:Airn 16kb truncation
4 GSM1017451 Airn 27kb truncation 392,778 CeMM 2012-10-10 [Oligo Array] NimbleGen custom Mouse MIRTA Array (GPL11618) mixed Mus musculus
Mus musculus		 unclassified source_name:Airn T27 5d differentiated D3 ESCs wildtype D3 ESCs_sonicated genomic DNA title:Airn 27kb truncation
5 GSM1017452 Airn 31kb truncation 392,778 CeMM 2012-10-10 [Oligo Array] NimbleGen custom Mouse MIRTA Array (GPL11618) mixed Mus musculus
Mus musculus		 unclassified source_name:Airn T31 5d differentiated D3 ESCs wildtype D3 ESCs_sonicated genomic DNA title:Airn 31kb truncation
6 GSM1017453 Airn 51kb truncation 392,778 CeMM 2012-10-10 [Oligo Array] NimbleGen custom Mouse MIRTA Array (GPL11618) mixed Mus musculus
Mus musculus		 unclassified source_name:Airn T51 5d differentiated D3 ESCs wildtype D3 ESCs_sonicated genomic DNA title:Airn 51kb truncation
7 GSM1020288 Forward Air Promoter (FAP) 392,778 CeMM 2012-10-16 [Oligo Array] NimbleGen custom Mouse MIRTA Array (GPL11618) mixed Mus musculus
Mus musculus		 embryo Forward Air Promoter (FAP) ES cells wildtype D3 ESCs_sonicated genomic DNA
8 GSM668137 GenAu MB BCELL v5.0 H3K9ac Pax5-/- Rag2-/- 392,778 Instutute of Molecular Pathology 2011-02-04 [Tiling Array] NimbleGen_GenAu MB BCELL v5.0 (GPL13123) genomic Mus musculus
Mus musculus		 lymphnode H3K9ac ChIP DNA from Pax5-/- Rag2-/- pro-B cells Input DNA from Pax5-/- Rag2-/- pro-B cells
9 GSM668138 GenAu MB BCELL v5.0 H3K9ac Rag2-/- 392,778 Instutute of Molecular Pathology 2011-02-04 [Tiling Array] NimbleGen_GenAu MB BCELL v5.0 (GPL13123) genomic Mus musculus
Mus musculus		 lymphnode H3K9ac ChIP DNA from Rag2-/- pro-B cells Input DNA from Rag2-/- pro-B cells
10 GSM668139 GenAu MB BCELL v5.0 H3K4me2 Pax5-/- Rag2-/- 392,778 Instutute of Molecular Pathology 2011-02-04 [Tiling Array] NimbleGen_GenAu MB BCELL v5.0 (GPL13123) genomic Mus musculus
Mus musculus		 lymphnode H3K4me2 ChIP DNA from Pax5-/- Rag2-/- pro-B cells Input DNA from Pax5-/- Rag2-/- pro-B cells
11 GSM668140 GenAu MB BCELL v5.0 H3K4me2 Rag2-/- 392,778 Instutute of Molecular Pathology 2011-02-04 [Tiling Array] NimbleGen_GenAu MB BCELL v5.0 (GPL13123) genomic Mus musculus
Mus musculus		 lymphnode H3K4me2 ChIP DNA from Rag2-/- pro-B cells Input DNA from Rag2-/- pro-B cells
12 GSM668141 GenAu MB BCELL v5.0 H3K4me3 Pax5-/- Rag2-/- 392,778 Instutute of Molecular Pathology 2011-02-04 [Tiling Array] NimbleGen_GenAu MB BCELL v5.0 (GPL13123) genomic Mus musculus
Mus musculus		 lymphnode H3K4me3 ChIP DNA from Pax5-/- Rag2-/- pro-B cells Input DNA from Pax5-/- Rag2-/- pro-B cells
13 GSM668142 GenAu MB BCELL v5.0 H3K4me3 Rag2-/- 392,778 Instutute of Molecular Pathology 2011-02-04 [Tiling Array] NimbleGen_GenAu MB BCELL v5.0 (GPL13123) genomic Mus musculus
Mus musculus		 lymphnode H3K4me3 ChIP DNA from Rag2-/- pro-B cells Input DNA from Rag2-/- pro-B cells
14 GSM668143 GenAu MB BCELL v5.0 Pax5 Rag2-/- 392,778 Instutute of Molecular Pathology 2011-02-04 [Tiling Array] NimbleGen_GenAu MB BCELL v5.0 (GPL13123) genomic Mus musculus
Mus musculus		 lymphnode Pax5 ChIP DNA from Rag2-/- pro-B cells Input DNA from Rag2-/- pro-B cells
15 GSM668144 GenAu MB BCELL v5.0 Ctcf Rag2-/- 392,778 Instutute of Molecular Pathology 2011-02-04 [Tiling Array] NimbleGen_GenAu MB BCELL v5.0 (GPL13123) genomic Mus musculus
Mus musculus		 lymphnode Ctcf ChIP DNA from Rag2-/- pro-B cells Input DNA from Rag2-/- pro-B cells
16 GSM668145 GenAu MB BCELL v5.0 H3K27me3 Rag2-/- 392,778 Instutute of Molecular Pathology 2011-02-04 [Tiling Array] NimbleGen_GenAu MB BCELL v5.0 (GPL13123) genomic Mus musculus
Mus musculus		 lymphnode H3K27me3 ChIP DNA from Rag2-/- pro-B cells Input DNA from Rag2-/- pro-B cells
17 GSM668146 GenAu MB BCELL v5.0 Ctcf Pax5-/- Rag2-/- 392,778 Instutute of Molecular Pathology 2011-02-04 [Tiling Array] NimbleGen_GenAu MB BCELL v5.0 (GPL13123) genomic Mus musculus
Mus musculus		 lymphnode Ctcf ChIP DNA from Pax5-/- Rag2-/- pro-B cells Input DNA from Pax5-/- Rag2-/- pro-B cells
18 GSM668147 GenAu MB BCELL v5.0 H3K36me3 Rag2-/- 392,778 Instutute of Molecular Pathology 2011-02-04 [Tiling Array] NimbleGen_GenAu MB BCELL v5.0 (GPL13123) genomic Mus musculus
Mus musculus		 lymphnode H3K36me3 ChIP DNA from Rag2-/- pro-B cells Input DNA from Rag2-/- pro-B cells
19 GSM668148 GenAu MB BCELL v5.0 Pax-bio Pax5bio/bio Rag2-/- 392,778 Instutute of Molecular Pathology 2011-02-04 [Tiling Array] NimbleGen_GenAu MB BCELL v5.0 (GPL13123) genomic Mus musculus
Mus musculus		 lymphnode Pax-bio ChIP DNA from Pax5bio/bio Rag2-/- pro-B cells Input DNA from Pax5bio/bio Rag2-/- pro-B cells
20 GSM701433 GenAu MB BCELL v5.0 Su(z)12 Rag2-/- 130369 392,778 Instutute of Molecular Pathology 2011-04-04 [Tiling Array] NimbleGen_GenAu MB BCELL v5.0 (GPL13123) genomic Mus musculus
Mus musculus		 lymphnode Su(z)12 ChIP DNA from Rag2-/- pro-B cells Input DNA from Rag2-/- pro-B cells
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