Gene Expression Omnibus (GEO) Overview Version：2013-04-06Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data Unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(502,421)		   Primates
(4,928)		   Rodents
(181,106)		   Mammals
(16,260)		   Vertebrates
(18,263)		   Invertebrates
(37,338)		   Plants
(91,454)		   Bacteria
(39,082)		   Viruses
(1,266)		   Phages
(101)		   Unclassified
(5,242)		   All
(898,944)		  
  SAGE NlaIII
(718)		   SAGE RsaI
(3)		   SAGE Sau3A
(37)		   MPSS
(100)		   GeneChip
(89,973)		   Tiling Array
(2,000)		   cDNA Array
(11,116)		   Oligo Array
(53,181)		   Bead Array
(13,914)		   Protein Array
(0)		   Antibody
(22)		   RT-PCR
(885)		   HT-Seq
(8,762)		   Other
(395)		   All
(181,106)		  
  brain
(27,644)		   blood
(21,024)		   connective
(11,488)		   reproductive
(6,618)		   muscular
(11,970)		   digestive
(4,585)		   liver
(30,267)		   lung
(8,052)		   urinary
(4,873)		   endo/exo-crine
(5,381)		   embryo
(7,581)		   adult aerial structure
(0)		   young aerial structure
(0)		   root
(0)		   meristem/growing tissue
(0)		   flower/sexual organ
(0)		   seed/fruit/grain
(0)		   pooled
(9,138)		   unclassified
(32,485)		   all
(181,106)		  
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Sample ID Title Number of Data Institute Submission date Platform Sample type Species Organ class Reasoning of the classification
Keywords used for the classification are shown with bold font.
1 GSM910324 WT MeDIP 20 UCLA 2012-04-06 [Oligo Array] 090316-Mouse DNA Methylation 2.1M Deluxe Promoter Array (GPL15413) genomic Mus musculus
Mus musculus		 lung WT mouse lung WT mouse lung input
2 GSM910325 TG MeDIP 20 UCLA 2012-04-06 [Oligo Array] 090316-Mouse DNA Methylation 2.1M Deluxe Promoter Array (GPL15413) genomic Mus musculus
Mus musculus		 lung TG mouse lung TG mouse lung input
3 GSM48396 R-1-cDNA-1 27,648 Paradigm Array Labs 2005-04-18 [cDNA Array] 1-Spotted cDNA/TIGR (GPL1967) RNA Mus musculus
Mus musculus		 liver/hepato cy3 Liver5 cy5 Pool
4 GSM48397 R-1-cDNA-2 27,648 Paradigm Array Labs 2005-04-18 [cDNA Array] 1-Spotted cDNA/TIGR (GPL1967) RNA Mus musculus
Mus musculus		 liver/hepato cy3 Liver5 cy5 Pool
5 GSM48398 R-1-cDNA-3 27,648 Paradigm Array Labs 2005-04-18 [cDNA Array] 1-Spotted cDNA/TIGR (GPL1967) RNA Mus musculus
Mus musculus		 liver/hepato cy3 Pool cy5 Liver5
6 GSM48399 R-1-cDNA-4 27,648 Paradigm Array Labs 2005-04-18 [cDNA Array] 1-Spotted cDNA/TIGR (GPL1967) RNA Mus musculus
Mus musculus		 liver/hepato cy3 Pool cy5 Liver5
7 GSM48400 R-1-cDNA-5 27,648 Paradigm Array Labs 2005-04-18 [cDNA Array] 1-Spotted cDNA/TIGR (GPL1967) RNA Mus musculus
Mus musculus		 liver/hepato cy3 Liver3 cy5 Liver5
8 GSM48401 R-1-cDNA-6 27,648 Paradigm Array Labs 2005-04-18 [cDNA Array] 1-Spotted cDNA/TIGR (GPL1967) RNA Mus musculus
Mus musculus		 liver/hepato cy3 Liver3 cy5 Liver5
9 GSM48402 R-1-cDNA-7 27,648 Paradigm Array Labs 2005-04-18 [cDNA Array] 1-Spotted cDNA/TIGR (GPL1967) RNA Mus musculus
Mus musculus		 liver/hepato cy3 Liver5 cy5 Liver3
10 GSM48403 R-1-cDNA-8 27,648 Paradigm Array Labs 2005-04-18 [cDNA Array] 1-Spotted cDNA/TIGR (GPL1967) RNA Mus musculus
Mus musculus		 liver/hepato cy3 Liver5 cy5 Liver3
11 GSM236848 SOM-rep1 26,129 Ã…bo Akademi University 2007-10-10 [Oligo Array] 1.5 kb mouse promoter ChIP-chip (MM5, NimbleGen Systems Inc.) (GPL6344) genomic Mus musculus
Mus musculus		 testis Amplified HSF2 ChIP DNA from mouse wild-type testis labeled with Cy5. Amplified Input DNA from mouse wild-type testis labeled with Cy3.
12 GSM236849 SOM-rep2 26,129 Ã…bo Akademi University 2007-10-10 [Oligo Array] 1.5 kb mouse promoter ChIP-chip (MM5, NimbleGen Systems Inc.) (GPL6344) genomic Mus musculus
Mus musculus		 testis Amplified HSF2 ChIP DNA from mouse wild-type testis labeled with Cy3. Amplified Input DNA from mouse wild-type testis labeled with Cy5.
13 GSM236850 SOM-rep3 26,129 Ã…bo Akademi University 2007-10-10 [Oligo Array] 1.5 kb mouse promoter ChIP-chip (MM5, NimbleGen Systems Inc.) (GPL6344) genomic Mus musculus
Mus musculus		 testis Amplified HSF2 ChIP DNA from mouse wild-type testis labeled with Cy5. Amplified Input DNA from mouse wild-type testis labeled with Cy3.
14 GSM558697 HSF1 SOM-rep1 26,097 Ã…bo Akademi University 2010-06-22 [Oligo Array] 1.5 kb mouse promoter ChIP-chip (MM5, NimbleGen Systems Inc.) (GPL6344) genomic Mus musculus
Mus musculus		 testis Amplified HSF1 ChIP DNA from mouse wild-type testis labeled with Cy3. Amplified Input DNA from mouse wild-type testis labeled with Cy5.
15 GSM558698 HSF1 SOM-rep2 26,097 Ã…bo Akademi University 2010-06-22 [Oligo Array] 1.5 kb mouse promoter ChIP-chip (MM5, NimbleGen Systems Inc.) (GPL6344) genomic Mus musculus
Mus musculus		 testis Amplified HSF1 ChIP DNA from mouse wild-type testis labeled with Cy3. Amplified Input DNA from mouse wild-type testis labeled with Cy5.
16 GSM558699 HSF1 SOM-rep3 26,097 Ã…bo Akademi University 2010-06-22 [Oligo Array] 1.5 kb mouse promoter ChIP-chip (MM5, NimbleGen Systems Inc.) (GPL6344) genomic Mus musculus
Mus musculus		 testis Amplified HSF1 ChIP DNA from mouse wild-type testis labeled with Cy5. Amplified Input DNA from mouse wild-type testis labeled with Cy3.
17 GSM16749 Amplified RNA from cardiac endothelium 17,280 U.T. Southwestern Medical Center 2004-02-10 [cDNA Array] 15 K cDNA (GPL980) RNA Mus musculus
Mus musculus		 vein Amplified RNA from cardiac endothelium
18 GSM16750 Amplified cardiac endothelial RNA 17,280 U.T. Southwestern Medical Center 2004-02-10 [cDNA Array] 15 K cDNA (GPL980) RNA Mus musculus
Mus musculus		 vein Amplified cardiac endothelial RNA
19 GSM30712 M1A_Long 5,760 National Institutes of Health 2004-09-15 [cDNA Array] 15k-1/3 (GPL1450) RNA Mus musculus
Mus musculus		 testis Mouse Round Spermatid Mouse Pachytene Spermatocytes
20 GSM30715 M2A_30 5,760 National Institutes of Health 2004-09-15 [cDNA Array] 15k-1/3 (GPL1450) RNA Mus musculus
Mus musculus		 testis Mouse Round Spermatids Mouse Pachytene Spermatocytes
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