Gene Expression Omnibus (GEO) Overview Version：2013-04-06Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data Unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(2,806)		   Primates
(64)		   Rodents
(344)		   Mammals
(0)		   Vertebrates
(4)		   Invertebrates
(95)		   Plants
(130)		   Bacteria
(477)		   Viruses
(0)		   Phages
(0)		   Unclassified
(9)		   All
(3,929)		  
  SAGE NlaIII
(0)		   SAGE RsaI
(0)		   SAGE Sau3A
(0)		   MPSS
(0)		   GeneChip
(128)		   Tiling Array
(0)		   cDNA Array
(0)		   Oligo Array
(6)		   Bead Array
(194)		   Protein Array
(0)		   Antibody
(0)		   RT-PCR
(0)		   HT-Seq
(16)		   Other
(0)		   All
(344)		  
  brain
(55)		   blood
(0)		   connective
(9)		   reproductive
(43)		   muscular
(109)		   digestive
(33)		   liver
(10)		   lung
(14)		   urinary
(0)		   endo/exo-crine
(0)		   embryo
(24)		   adult aerial structure
(0)		   young aerial structure
(0)		   root
(0)		   meristem/growing tissue
(0)		   flower/sexual organ
(0)		   seed/fruit/grain
(0)		   pooled
(0)		   unclassified
(47)		   all
(344)		  
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Sample ID Title Number of Data Institute Submission date Platform Sample type Species Organ class Reasoning of the classification
Keywords used for the classification are shown with bold font.
1 GSM692410 Frontal Cortex rep1 0 University of Helsinki 2011-03-16 [HT Sequencing] Illumina Genome Analyzer II (Mus musculus) (GPL9250) SRA Mus musculus
Mus musculus		 cerebrum Frontal cortex
2 GSM692411 Frontal Cortex rep2 0 University of Helsinki 2011-03-16 [HT Sequencing] Illumina Genome Analyzer II (Mus musculus) (GPL9250) SRA Mus musculus
Mus musculus		 cerebrum Frontal cortex
3 GSM692412 Frontal Cortex rep3 0 University of Helsinki 2011-03-16 [HT Sequencing] Illumina Genome Analyzer II (Mus musculus) (GPL9250) SRA Mus musculus
Mus musculus		 cerebrum Frontal cortex
4 GSM692413 Frontal Cortex rep1 pooled 0 University of Helsinki 2011-03-16 [HT Sequencing] Illumina Genome Analyzer II (Mus musculus) (GPL9250) SRA Mus musculus
Mus musculus		 cerebrum Frontal cortex
5 GSM692414 Frontal Cortex rep2 pooled 0 University of Helsinki 2011-03-16 [HT Sequencing] Illumina Genome Analyzer II (Mus musculus) (GPL9250) SRA Mus musculus
Mus musculus		 cerebrum Frontal cortex
6 GSM692415 Frontal Cortex rep3 pooled 0 University of Helsinki 2011-03-16 [HT Sequencing] Illumina Genome Analyzer II (Mus musculus) (GPL9250) SRA Mus musculus
Mus musculus		 cerebrum Frontal cortex
7 GSM692416 Hippocampus rep1 0 University of Helsinki 2011-03-16 [HT Sequencing] Illumina Genome Analyzer II (Mus musculus) (GPL9250) SRA Mus musculus
Mus musculus		 cerebrum Hippocampus
8 GSM692417 Hippocampus rep2 0 University of Helsinki 2011-03-16 [HT Sequencing] Illumina Genome Analyzer II (Mus musculus) (GPL9250) SRA Mus musculus
Mus musculus		 cerebrum Hippocampus
9 GSM692418 Hippocampus rep3 0 University of Helsinki 2011-03-16 [HT Sequencing] Illumina Genome Analyzer II (Mus musculus) (GPL9250) SRA Mus musculus
Mus musculus		 cerebrum Hippocampus
10 GSM692419 Hippocampus rep1 pooled 0 University of Helsinki 2011-03-16 [HT Sequencing] Illumina Genome Analyzer II (Mus musculus) (GPL9250) SRA Mus musculus
Mus musculus		 cerebrum Hippocampus
11 GSM692420 Hippocampus rep2 pooled 0 University of Helsinki 2011-03-16 [HT Sequencing] Illumina Genome Analyzer II (Mus musculus) (GPL9250) SRA Mus musculus
Mus musculus		 cerebrum Hippocampus
12 GSM692421 Hippocampus rep3 pooled 0 University of Helsinki 2011-03-16 [HT Sequencing] Illumina Genome Analyzer II (Mus musculus) (GPL9250) SRA Mus musculus
Mus musculus		 cerebrum Hippocampus
13 GSM990676 shGFP rep1 0 Aalto University School of Science 2012-08-22 [HT Sequencing] AB SOLiD 4 System (Mus musculus) (GPL14602) SRA Mus musculus
Mus musculus		 unclassified source_name:MPC11 title:shGFP rep1
14 GSM990677 Ell2-KD rep1 0 Aalto University School of Science 2012-08-22 [HT Sequencing] AB SOLiD 4 System (Mus musculus) (GPL14602) SRA Mus musculus
Mus musculus		 unclassified source_name:MPC11 title:Ell2-KD rep1
15 GSM990678 shGFP rep2 0 Aalto University School of Science 2012-08-22 [HT Sequencing] AB SOLiD 4 System (Mus musculus) (GPL14602) SRA Mus musculus
Mus musculus		 unclassified source_name:MPC11 title:shGFP rep2
16 GSM990679 Ell2-KD rep2 0 Aalto University School of Science 2012-08-22 [HT Sequencing] AB SOLiD 4 System (Mus musculus) (GPL14602) SRA Mus musculus
Mus musculus		 unclassified source_name:MPC11 title:Ell2-KD rep2
17 GSM524610 Stomach_wt_rep1 46,643 University of Tampere 2010-03-19 [Bead Array] Illumina mouse-6 v1.1 expression beadchip [Array_Address_Id version] (GPL6481) RNA Mus musculus
Mus musculus		 stomach Mouse stomach
18 GSM524611 Stomach_wt_rep2 46,643 University of Tampere 2010-03-19 [Bead Array] Illumina mouse-6 v1.1 expression beadchip [Array_Address_Id version] (GPL6481) RNA Mus musculus
Mus musculus		 stomach Mouse stomach
19 GSM524612 Stomach_wt_rep3 46,643 University of Tampere 2010-03-19 [Bead Array] Illumina mouse-6 v1.1 expression beadchip [Array_Address_Id version] (GPL6481) RNA Mus musculus
Mus musculus		 stomach Mouse stomach
20 GSM524613 Stomach_Car9ko_rep1 46,643 University of Tampere 2010-03-19 [Bead Array] Illumina mouse-6 v1.1 expression beadchip [Array_Address_Id version] (GPL6481) RNA Mus musculus
Mus musculus		 stomach Mouse stomach, Car9 knockout
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