Gene Expression Omnibus (GEO) Overview Version：2013-04-06Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data Unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(27,231)		   Primates
(191)		   Rodents
(7,993)		   Mammals
(1,491)		   Vertebrates
(704)		   Invertebrates
(853)		   Plants
(4,347)		   Bacteria
(2,475)		   Viruses
(10)		   Phages
(0)		   Unclassified
(91)		   All
(45,412)		  
  SAGE NlaIII
(6)		   SAGE RsaI
(0)		   SAGE Sau3A
(0)		   MPSS
(0)		   GeneChip
(4,241)		   Tiling Array
(0)		   cDNA Array
(1,168)		   Oligo Array
(1,342)		   Bead Array
(991)		   Protein Array
(0)		   Antibody
(0)		   RT-PCR
(22)		   HT-Seq
(223)		   Other
(0)		   All
(7,993)		  
  brain
(1,290)		   blood
(1,448)		   connective
(396)		   reproductive
(253)		   muscular
(398)		   digestive
(126)		   liver
(752)		   lung
(351)		   urinary
(381)		   endo/exo-crine
(212)		   embryo
(461)		   adult aerial structure
(0)		   young aerial structure
(0)		   root
(0)		   meristem/growing tissue
(0)		   flower/sexual organ
(0)		   seed/fruit/grain
(0)		   pooled
(540)		   unclassified
(1,385)		   all
(7,993)		  
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Sample ID Title Number of Data Institute Submission date Platform Sample type Species Organ class Reasoning of the classification
Keywords used for the classification are shown with bold font.
1 GSM906325 IP Ago1 360,926 Ludwig-Maximilians University 2012-03-29 [HT Sequencing] Illumina Genome Analyzer IIx (Mus musculus) (GPL11002) SRA Mus musculus
Mus musculus		 unclassified source_name:NIH3T3_MCMV_Ago1_IP title:IP Ago1 description:total RNA after IP, size-selected (17-30 nt)
2 GSM906326 IP Ago2 288,844 Ludwig-Maximilians University 2012-03-29 [HT Sequencing] Illumina Genome Analyzer IIx (Mus musculus) (GPL11002) SRA Mus musculus
Mus musculus		 unclassified source_name:NIH3T3_MCMV_Ago2_IP title:IP Ago2 description:total RNA after IP, size-selected (17-30 nt)
3 GSM906324 MCMV infected cells 158,282 Ludwig-Maximilians University 2012-03-29 [HT Sequencing] Illumina Genome Analyzer IIx (Mus musculus) (GPL11002) SRA Mus musculus
Mus musculus		 unclassified source_name:NIH3T3_MCMV title:MCMV infected cells description:total RNA, size-selected (17-30 nt)
4 GSM906323 mock infected cells 58,178 Ludwig-Maximilians University 2012-03-29 [HT Sequencing] Illumina Genome Analyzer IIx (Mus musculus) (GPL11002) SRA Mus musculus
Mus musculus		 unclassified source_name:NIH3T3_mock title:mock infected cells description:total RNA, size-selected (17-30 nt)
5 GSM1004652 NPC merged mononucleosomes 0 German Cancer Research Center 2012-09-14 [HT Sequencing] Illumina HiSeq 2000 (Mus musculus) (GPL13112) SRA Mus musculus
Mus musculus		 cerebrum Neuronal progenitor cells
6 GSM1004653 ESC merged mononucleosomes 0 German Cancer Research Center 2012-09-14 [HT Sequencing] Illumina HiSeq 2000 (Mus musculus) (GPL13112) SRA Mus musculus
Mus musculus		 embryo Embryonic stem cells
7 GSM1004654 MEF merged mononucleosomes 0 German Cancer Research Center 2012-09-14 [HT Sequencing] Illumina HiSeq 2000 (Mus musculus) (GPL13112) SRA Mus musculus
Mus musculus		 skin Mouse fibroblast cells
8 GSM1005488 NPCtotalRNA1 0 German Cancer Research Center 2012-09-18 [HT Sequencing] Illumina Genome Analyzer IIx (Mus musculus) (GPL11002) SRA Mus musculus
Mus musculus		 cerebrum Neuronal progenitor cells
9 GSM1005489 NPCtotalRNA2 0 German Cancer Research Center 2012-09-18 [HT Sequencing] Illumina HiSeq 2000 (Mus musculus) (GPL13112) SRA Mus musculus
Mus musculus		 cerebrum Neuronal progenitor cells
10 GSM1005490 ESCtotalRNA1 0 German Cancer Research Center 2012-09-18 [HT Sequencing] Illumina Genome Analyzer IIx (Mus musculus) (GPL11002) SRA Mus musculus
Mus musculus		 embryo Embryonic stem cells
11 GSM1005491 ESCtotalRNA2 0 German Cancer Research Center 2012-09-18 [HT Sequencing] Illumina HiSeq 2000 (Mus musculus) (GPL13112) SRA Mus musculus
Mus musculus		 embryo Embryonic stem cells
12 GSM1005492 MEFtotalRNA 0 German Cancer Research Center 2012-09-18 [HT Sequencing] Illumina HiSeq 2000 (Mus musculus) (GPL13112) SRA Mus musculus
Mus musculus		 skin Mouse fibroblast cells
13 GSM1005503 ESC_H3K27ac 0 German Cancer Research Center 2012-09-18 [HT Sequencing] Illumina HiSeq 2000 (Mus musculus) (GPL13112) SRA Mus musculus
Mus musculus		 embryo Embryonic stem cells
14 GSM1005504 ESC_H3K9ac 0 German Cancer Research Center 2012-09-18 [HT Sequencing] Illumina HiSeq 2000 (Mus musculus) (GPL13112) SRA Mus musculus
Mus musculus		 embryo Embryonic stem cells
15 GSM1005505 ESC_H3K9me3 0 German Cancer Research Center 2012-09-18 [HT Sequencing] Illumina HiSeq 2000 (Mus musculus) (GPL13112) SRA Mus musculus
Mus musculus		 embryo Embryonic stem cells
16 GSM1031229 RRBS Wildtype mice mm_14749_control_gr1 0 University of Münster 2012-11-05 [HT Sequencing] Illumina HiScanSQ (Mus musculus) (GPL16173) SRA Mus musculus
Mus musculus		 bone marrow Gr1+ sorted mouse bone marrow
17 GSM1031230 RRBS Wildtype mice mm_14752_control_gr1 0 University of Münster 2012-11-05 [HT Sequencing] Illumina HiScanSQ (Mus musculus) (GPL16173) SRA Mus musculus
Mus musculus		 bone marrow Gr1+ sorted mouse bone marrow
18 GSM1031231 RRBS Wildtype mice mm_14786_control_gr1 0 University of Münster 2012-11-05 [HT Sequencing] Illumina HiScanSQ (Mus musculus) (GPL16173) SRA Mus musculus
Mus musculus		 bone marrow Gr1+ sorted mouse bone marrow
19 GSM1031232 RRBS PML-RARa Knock-in mice mm_31_PML-RAR_gr1 0 University of Münster 2012-11-05 [HT Sequencing] Illumina HiScanSQ (Mus musculus) (GPL16173) SRA Mus musculus
Mus musculus		 bone marrow Gr1+ sorted mouse bone marrow
20 GSM1031233 RRBS PML-RARa Knock-in mice mm_33_PML-RAR_gr1 0 University of Münster 2012-11-05 [HT Sequencing] Illumina HiScanSQ (Mus musculus) (GPL16173) SRA Mus musculus
Mus musculus		 bone marrow Gr1+ sorted mouse bone marrow
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