Gene Expression Omnibus (GEO) Overview Version´╝Ü2014-04-12Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.

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RSS
Data Unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(2,851)
  Primates
(0)
  Rodents
(2,564)
  Mammals
(0)
  Vertebrates
(0)
  Invertebrates
(59)
  Plants
(464)
  Bacteria
(78)
  Viruses
(0)
  Phages
(0)
  Unclassified
(0)
  All
(6,302)
 
  SAGE NlaIII
(0)
  SAGE RsaI
(0)
  SAGE Sau3A
(0)
  MPSS
(32)
  GeneChip
(1,198)
  Tiling Array
(0)
  cDNA Array
(762)
  Oligo Array
(554)
  Bead Array
(0)
  Protein Array
(0)
  Antibody
(9)
  RT-PCR
(0)
  HT-Seq
(0)
  Other
(0)
  All
(2,564)
 
  brain
(500)
  blood
(344)
  connective
(71)
  reproductive
(55)
  muscular
(0)
  digestive
(0)
  liver
(446)
  lung
(0)
  urinary
(0)
  endo/exo-crine
(52)
  embryo
(0)
  adult aerial structure
(0)
  young aerial structure
(0)
  root
(0)
  meristem/growing tissue
(0)
  flower/sexual organ
(0)
  seed/fruit/grain
(0)
  pooled
(239)
  unclassified
(163)
  all
(2,564)
 
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Sample ID Title Number of Data Institute Submission date Platform Sample type Species Organ class Reasoning of the classification
Keywords used for the classification are shown with bold font.
1 GSM37569 Sprague Dawley Control 1 23,040 St Vincents Institute 2004-12-14 [Oligo Array] Ramaciotti Centre 10k combined Rat Oligo (GPL1747) RNA Rattus norvegicus
Rattus norvegicus
kidney Reference kidney total RNA Sprague Dawley control kidney total RNA
2 GSM37570 Sprague Dawley Diabetic 2 23,040 St Vincents Institute 2004-12-14 [Oligo Array] Ramaciotti Centre 10k combined Rat Oligo (GPL1747) RNA Rattus norvegicus
Rattus norvegicus
kidney Sprague Dawley diabetic kidney total RNA Reference kidney total RNA
3 GSM37571 Sprague Dawley Diabetic 1 23,040 St Vincents Institute 2004-12-14 [Oligo Array] Ramaciotti Centre 10k combined Rat Oligo (GPL1747) RNA Rattus norvegicus
Rattus norvegicus
kidney Reference kidney total RNA Sprague Dawley diabetic kidney total RNA
4 GSM37572 Sprague Dawley Control 2 23,040 St Vincents Institute 2004-12-14 [Oligo Array] Ramaciotti Centre 10k combined Rat Oligo (GPL1747) RNA Rattus norvegicus
Rattus norvegicus
kidney Sprague Dawley control kidney total RNA Reference kidney total RNA
5 GSM37573 Ren-2 Control 1 23,040 St Vincents Institute 2004-12-14 [Oligo Array] Ramaciotti Centre 10k combined Rat Oligo (GPL1747) RNA Rattus norvegicus
Rattus norvegicus
kidney Reference kidney total RNA Ren-2 control kidney total RNA
6 GSM37574 Ren-2 Control 2 23,040 St Vincents Institute 2004-12-14 [Oligo Array] Ramaciotti Centre 10k combined Rat Oligo (GPL1747) RNA Rattus norvegicus
Rattus norvegicus
kidney Ren-2 control kidney total RNA Reference kidney total RNA
7 GSM37575 Ren-2 Diabetic 1 23,040 St Vincents Institute 2004-12-14 [Oligo Array] Ramaciotti Centre 10k combined Rat Oligo (GPL1747) RNA Rattus norvegicus
Rattus norvegicus
kidney Reference kidney total RNA Ren-2 diabetic kidney total RNA
8 GSM37576 Ren-2 Diabetic 2 23,040 St Vincents Institute 2004-12-14 [Oligo Array] Ramaciotti Centre 10k combined Rat Oligo (GPL1747) RNA Rattus norvegicus
Rattus norvegicus
kidney Ren-2 diabetic kidney total RNA Reference kidney total RNA
9 GSM36415 RIE vs RIE - TGF-beta x 1 hr 20,500 Texas Children's Cancer Center/Baylor College of Medicine 2004-11-26 [Oligo Array] Agilent-011868 Rat Oligo Microarray G4130A (Feature Number version) (GPL890) RNA Rattus norvegicus
Rattus norvegicus
intestine RIE (rat intestinal epithelial) cells RIE cells treated with TGF-beta x 1 hr
10 GSM36416 RIE vs RIE - TGF-beta x 1 hr; #2 20,500 Texas Children's Cancer Center/Baylor College of Medicine 2004-11-26 [Oligo Array] Agilent-011868 Rat Oligo Microarray G4130A (Feature Number version) (GPL890) RNA Rattus norvegicus
Rattus norvegicus
intestine RIE (rat intestinal epithelial) cells RIE cells treated with TGF-beta
11 GSM36417 RIE vs RIE - TGF-beta x 1 hr; #3 20,500 Texas Children's Cancer Center/Baylor College of Medicine 2004-11-26 [Oligo Array] Agilent-011868 Rat Oligo Microarray G4130A (Feature Number version) (GPL890) RNA Rattus norvegicus
Rattus norvegicus
intestine RIE (rat intestinal epithlial) cells RIE cells treated with TGF-beta x 1 hr
12 GSM36418 RIE vs RIE - TGF-beta x 1 hr; #4 20,500 Texas Children's Cancer Center/Baylor College of Medicine 2004-11-26 [Oligo Array] Agilent-011868 Rat Oligo Microarray G4130A (Feature Number version) (GPL890) RNA Rattus norvegicus
Rattus norvegicus
intestine RIE (rat intestinal epithelial) cells RIE cells treated with TGF-beta x 1 hr
13 GSM36419 RIE-Ras vs RIE-Ras - TGF-beta x 1 hr; #1 20,500 Texas Children's Cancer Center/Baylor College of Medicine 2004-11-26 [Oligo Array] Agilent-011868 Rat Oligo Microarray G4130A (Feature Number version) (GPL890) RNA Rattus norvegicus
Rattus norvegicus
unclassified source_name:RIE-Ras cells RIE-Ras cells treated with TGF-beta x 1 hr title:RIE-Ras vs RIE-Ras - TGF-beta x 1 hr; #1 description:RIE-Ras cells were established by stable transfection of the parental cells with pSV2-H-Ras(12V) which contain human sequences encoding the constitutively active H-Ras(12V) protein. RIE-Ras cells treated with 2 ng/ml of TGF-beta-1 for 1 hr were compared to control cells. Sample #1 of 4. Fold-change corresponds to (TGF-beta treated probe signal/Control probe signal). Keywords = TGF-beta Keywords = Ras
14 GSM36420 RIE-Ras vs RIE-Ras TGF-beta x 1 hr; #2 20,500 Texas Children's Cancer Center/Baylor College of Medicine 2004-11-26 [Oligo Array] Agilent-011868 Rat Oligo Microarray G4130A (Feature Number version) (GPL890) RNA Rattus norvegicus
Rattus norvegicus
unclassified source_name:RIE-Ras cells RIE-Ras cells treated with TGF-beta x 1 hr title:RIE-Ras vs RIE-Ras TGF-beta x 1 hr; #2 description:RIE-Ras cells were established by stable transfection of the parental cells with pSV2-H-Ras(12V) which contain human sequences encoding the constitutively active H-Ras(12V) protein. RIE-Ras cells treated with 2 ng/ml of TGF-beta-1 for 1 hr were compared to control cells. Sample #2 of 4. Fold-change corresponds to (TGF-beta treated probe signal/Control probe signal). Keywords = TGF-beta Keywords = Ras
15 GSM36421 RIE-Ras vs RIE-Ras TGF-beta x 1 hr; #3 20,500 Texas Children's Cancer Center/Baylor College of Medicine 2004-11-26 [Oligo Array] Agilent-011868 Rat Oligo Microarray G4130A (Feature Number version) (GPL890) RNA Rattus norvegicus
Rattus norvegicus
unclassified source_name:RIE-Ras cells RIE-Ras cells treated with TGF-beta x 1 hr title:RIE-Ras vs RIE-Ras TGF-beta x 1 hr; #3 description:RIE-Ras cells were established by stable transfection of the parental cells with pSV2-H-Ras(12V) which contain human sequences encoding the constitutively active H-Ras(12V) protein. RIE-Ras cells treated with 2 ng/ml of TGF-beta-1 for 1 hr were compared to control cells. Sample #3 of 4. Fold-change corresponds to (TGF-beta treated probe signal/Control probe signal). Keywords = TGF-beta Keywords = Ras
16 GSM36422 RIE-Ras vs RIE-Ras TGF-beta x 1 hr; #4 20,500 Texas Children's Cancer Center/Baylor College of Medicine 2004-11-26 [Oligo Array] Agilent-011868 Rat Oligo Microarray G4130A (Feature Number version) (GPL890) RNA Rattus norvegicus
Rattus norvegicus
unclassified source_name:RIE-Ras cells RIE-Ras cells treated with TGF-beta x 1 hr title:RIE-Ras vs RIE-Ras TGF-beta x 1 hr; #4 description:RIE-Ras cells were established by stable transfection of the parental cells with pSV2-H-Ras(12V) which contain human sequences encoding the constitutively active H-Ras(12V) protein. RIE-Ras cells treated with 2 ng/ml of TGF-beta-1 for 1 hr were compared to control cells. Sample #4 of 4. Fold-change corresponds to (TGF-beta treated probe signal/Control probe signal). Keywords = TGF-beta Keywords = Ras
17 GSM32111 brain, hippocampus: C1_e1_le1 15,923 Translational Genomics 2004-10-12 [GeneChip] [RAE230A] Affymetrix Rat Expression 230A Array (GPL341) RNA Rattus norvegicus
Rattus norvegicus
cerebrum brain, hippocampus
18 GSM32112 brain, hippocampus: C2_e1_le1 15,923 Translational Genomics 2004-10-12 [GeneChip] [RAE230A] Affymetrix Rat Expression 230A Array (GPL341) RNA Rattus norvegicus
Rattus norvegicus
cerebrum brain, hippocampus
19 GSM32113 brain, hippocampus: C3_e1_le1 15,923 Translational Genomics 2004-10-12 [GeneChip] [RAE230A] Affymetrix Rat Expression 230A Array (GPL341) RNA Rattus norvegicus
Rattus norvegicus
cerebrum brain, hippocampus
20 GSM32114 brain, hippocampus: KA1_e1_le1 15,923 Translational Genomics 2004-10-12 [GeneChip] [RAE230A] Affymetrix Rat Expression 230A Array (GPL341) RNA Rattus norvegicus
Rattus norvegicus
cerebrum brain, hippocampus
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