Gene Expression Omnibus (GEO) Overview Version：2013-04-06Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data Unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(6,253)		   Primates
(0)		   Rodents
(1,052)		   Mammals
(60)		   Vertebrates
(330)		   Invertebrates
(526)		   Plants
(622)		   Bacteria
(259)		   Viruses
(40)		   Phages
(0)		   Unclassified
(9)		   All
(9,151)		  
  SAGE NlaIII
(0)		   SAGE RsaI
(0)		   SAGE Sau3A
(0)		   MPSS
(0)		   GeneChip
(409)		   Tiling Array
(0)		   cDNA Array
(52)		   Oligo Array
(75)		   Bead Array
(410)		   Protein Array
(0)		   Antibody
(0)		   RT-PCR
(0)		   HT-Seq
(106)		   Other
(0)		   All
(1,052)		  
  brain
(42)		   blood
(158)		   connective
(84)		   reproductive
(36)		   muscular
(14)		   digestive
(0)		   liver
(54)		   lung
(24)		   urinary
(0)		   endo/exo-crine
(2)		   embryo
(268)		   adult aerial structure
(0)		   young aerial structure
(0)		   root
(0)		   meristem/growing tissue
(0)		   flower/sexual organ
(0)		   seed/fruit/grain
(0)		   pooled
(68)		   unclassified
(302)		   all
(1,052)		  
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Sample ID Title Number of Data Institute Submission date Platform Sample type Species Organ class Reasoning of the classification
Keywords used for the classification are shown with bold font.
1 GSM552522 Zic3 ChIP-on-chip in mouse ES cells 243,496 Genome Institute of Singapore 2010-06-08 [Oligo Array] Agilent-014716 Mouse Promoter ChIP-on-Chip Set 244K, Microarray 1 of 2 (G4490A) (Feature Number version) (GPL4128) genomic Mus musculus
Mus musculus		 embryo Zic3 ChIP-on-chip in mouse ES cells
2 GSM552532 Zic3 ChIP-on-chip in mouse ES cells 243,486 Genome Institute of Singapore 2010-06-08 [Oligo Array] Agilent-014717 Mouse Promoter ChIP-on-Chip Set 244K, Microarray 2 of 2 (G4490A) (Feature Number version) (GPL4129) genomic Mus musculus
Mus musculus		 embryo Zic3 ChIP-on-chip in mouse ES cells
3 GSM320264 XEN_rep3_ChIP-chip (microarray 2 of 2) 243,486 GIS 2008-09-12 [Oligo Array] Agilent-014717 Mouse Promoter ChIP-on-Chip Set 244K, Microarray 2 of 2 (G4490A) (Feature Number version) (GPL4129) genomic Mus musculus
Mus musculus		 embryo Sall4 regulates distinct transcription circuitries in different blastocyst-derived stem cell lineages_XEN_3
4 GSM320263 XEN_rep3_ChIP-chip (microarray 1 of 2) 243,496 GIS 2008-09-12 [Oligo Array] Agilent-014716 Mouse Promoter ChIP-on-Chip Set 244K, Microarray 1 of 2 (G4490A) (Feature Number version) (GPL4128) genomic Mus musculus
Mus musculus		 embryo Sall4 regulates distinct transcription circuitries in different blastocyst-derived stem cell lineages_XEN_3
5 GSM313607 Xen_rep3 24,607 GIS 2008-08-19 [Bead Array] Illumina mouseRef-8 v1.1 expression beadchip (GPL6103) RNA Mus musculus
Mus musculus		 unclassified source_name:Xen cells wild type title:Xen_rep3 description:no additional information
6 GSM320262 XEN_rep2_ChIP-chip (microarray 2 of 2) 243,486 GIS 2008-09-12 [Oligo Array] Agilent-014717 Mouse Promoter ChIP-on-Chip Set 244K, Microarray 2 of 2 (G4490A) (Feature Number version) (GPL4129) genomic Mus musculus
Mus musculus		 embryo Sall4 regulates distinct transcription circuitries in different blastocyst-derived stem cell lineages_XEN_2
7 GSM320261 XEN_rep2_ChIP-chip (microarray 1 of 2) 243,496 GIS 2008-09-12 [Oligo Array] Agilent-014716 Mouse Promoter ChIP-on-Chip Set 244K, Microarray 1 of 2 (G4490A) (Feature Number version) (GPL4128) genomic Mus musculus
Mus musculus		 embryo Sall4 regulates distinct transcription circuitries in different blastocyst-derived stem cell lineages_XEN_2
8 GSM313606 Xen_rep2 24,607 GIS 2008-08-19 [Bead Array] Illumina mouseRef-8 v1.1 expression beadchip (GPL6103) RNA Mus musculus
Mus musculus		 unclassified source_name:Xen cells wild type title:Xen_rep2 description:no additional information
9 GSM320260 XEN_rep1_ChIP-chip (microarray 2 of 2) 243,486 GIS 2008-09-12 [Oligo Array] Agilent-014717 Mouse Promoter ChIP-on-Chip Set 244K, Microarray 2 of 2 (G4490A) (Feature Number version) (GPL4129) genomic Mus musculus
Mus musculus		 embryo Sall4 regulates distinct transcription circuitries in different blastocyst-derived stem cell lineages_XEN_1
10 GSM319962 XEN_rep1_ChIP-chip (microarray 1 of 2) 243,496 GIS 2008-09-11 [Oligo Array] Agilent-014716 Mouse Promoter ChIP-on-Chip Set 244K, Microarray 1 of 2 (G4490A) (Feature Number version) (GPL4128) genomic Mus musculus
Mus musculus		 embryo Sall4 regulates distinct transcription circuitries in different blastocyst-derived stem cell lineages_XEN_1
11 GSM313605 Xen_rep1 24,607 GIS 2008-08-19 [Bead Array] Illumina mouseRef-8 v1.1 expression beadchip (GPL6103) RNA Mus musculus
Mus musculus		 unclassified source_name:Xen cells wild type title:Xen_rep1 description:no additional information
12 GSM313613 Xen Scrb KD_rep3 24,607 GIS 2008-08-19 [Bead Array] Illumina mouseRef-8 v1.1 expression beadchip (GPL6103) RNA Mus musculus
Mus musculus		 unclassified source_name:Xen KD control title:Xen Scrb KD_rep3 description:no additional information
13 GSM313612 Xen Scrb KD_rep2 24,607 GIS 2008-08-19 [Bead Array] Illumina mouseRef-8 v1.1 expression beadchip (GPL6103) RNA Mus musculus
Mus musculus		 unclassified source_name:Xen KD control title:Xen Scrb KD_rep2 description:no additional information
14 GSM313611 Xen Scrb KD_rep1 24,607 GIS 2008-08-19 [Bead Array] Illumina mouseRef-8 v1.1 expression beadchip (GPL6103) RNA Mus musculus
Mus musculus		 unclassified source_name:Xen KD control title:Xen Scrb KD_rep1 description:no additional information
15 GSM313610 Xen Sall4 KD_rep3 24,607 GIS 2008-08-19 [Bead Array] Illumina mouseRef-8 v1.1 expression beadchip (GPL6103) RNA Mus musculus
Mus musculus		 unclassified source_name:Xen cells with Sall4 knockdown title:Xen Sall4 KD_rep3 description:no additional information
16 GSM313609 Xen Sall4 KD_rep2 24,607 GIS 2008-08-19 [Bead Array] Illumina mouseRef-8 v1.1 expression beadchip (GPL6103) RNA Mus musculus
Mus musculus		 unclassified source_name:Xen cells with Sall4 knockdown title:Xen Sall4 KD_rep2 description:no additional information
17 GSM313608 Xen Sall4 KD_rep1 24,607 GIS 2008-08-19 [Bead Array] Illumina mouseRef-8 v1.1 expression beadchip (GPL6103) RNA Mus musculus
Mus musculus		 unclassified source_name:Xen cells with Sall4 knockdown title:Xen Sall4 KD_rep1 description:no additional information
18 GSM868940 wt-blood-gr1-low-2 45,281 Singapore Immunology Network 2012-01-31 [Bead Array] Illumina MouseWG-6 v2.0 expression beadchip (GPL6887) RNA Mus musculus
Mus musculus		 lymphnode healthy donor, dendritic cell, Gr1 low
19 GSM868939 wt-blood-gr1-low-1 45,281 Singapore Immunology Network 2012-01-31 [Bead Array] Illumina MouseWG-6 v2.0 expression beadchip (GPL6887) RNA Mus musculus
Mus musculus		 lymphnode healthy donor, dendritic cell, Gr1 low
20 GSM868938 wt-blood-gr1-high-3 45,281 Singapore Immunology Network 2012-01-31 [Bead Array] Illumina MouseWG-6 v2.0 expression beadchip (GPL6887) RNA Mus musculus
Mus musculus		 lymphnode healthy donor, dendritic cell, Gr1 high
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