Gene Expression Omnibus (GEO) Overview Version:2013-04-06Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data Unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(27,231)
  Primates
(191)
  Rodents
(7,993)
  Mammals
(1,491)
  Vertebrates
(704)
  Invertebrates
(853)
  Plants
(4,347)
  Bacteria
(2,475)
  Viruses
(10)
  Phages
(0)
  Unclassified
(91)
  All
(45,412)
 
  SAGE NlaIII
(6)
  SAGE RsaI
(0)
  SAGE Sau3A
(0)
  MPSS
(0)
  GeneChip
(4,241)
  Tiling Array
(0)
  cDNA Array
(1,168)
  Oligo Array
(1,342)
  Bead Array
(991)
  Protein Array
(0)
  Antibody
(0)
  RT-PCR
(22)
  HT-Seq
(223)
  Other
(0)
  All
(7,993)
 
  brain
(1,290)
  blood
(1,448)
  connective
(396)
  reproductive
(253)
  muscular
(398)
  digestive
(126)
  liver
(752)
  lung
(351)
  urinary
(381)
  endo/exo-crine
(212)
  embryo
(461)
  adult aerial structure
(0)
  young aerial structure
(0)
  root
(0)
  meristem/growing tissue
(0)
  flower/sexual organ
(0)
  seed/fruit/grain
(0)
  pooled
(540)
  unclassified
(1,385)
  all
(7,993)
 
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Sample ID Title Number of Data Institute Submission date Platform Sample type Species Organ class Reasoning of the classification
Keywords used for the classification are shown with bold font.
1 GSM99338 Primitive hematopoietic stem cells 22,690 Institut fuer Zellbiologie 2006-03-07 [GeneChip] [MOE430A] Affymetrix Mouse Expression 430A Array (GPL339) RNA Mus musculus
Mus musculus
bone marrow FACS sorted stem cells from mouse bone marrow
2 GSM99337 Maturing hematopoietic stem cells 22,690 Institut fuer Zellbiologie 2006-03-07 [GeneChip] [MOE430A] Affymetrix Mouse Expression 430A Array (GPL339) RNA Mus musculus
Mus musculus
bone marrow FACS sorted stem cells from mouse bone marrow
3 GSM968813 X6752318096 F MYC negative#3394 45,265 Max-Delbrück-Centrum für Molekulare Medizin (MDC) 2012-07-17 [Bead Array] Illumina MouseWG-6 v2.0 expression beadchip (GPL6887) RNA Mus musculus
Mus musculus
lymphnode Germinal center B-cells
4 GSM968812 X6752318096 E MYC positive#3394 45,265 Max-Delbrück-Centrum für Molekulare Medizin (MDC) 2012-07-17 [Bead Array] Illumina MouseWG-6 v2.0 expression beadchip (GPL6887) RNA Mus musculus
Mus musculus
lymphnode Germinal center B-cells
5 GSM968811 X6752318020 F MYC negative#3397 45,265 Max-Delbrück-Centrum für Molekulare Medizin (MDC) 2012-07-17 [Bead Array] Illumina MouseWG-6 v2.0 expression beadchip (GPL6887) RNA Mus musculus
Mus musculus
lymphnode Germinal center B-cells
6 GSM968810 X6752318020 E MYC positive#3397 45,265 Max-Delbrück-Centrum für Molekulare Medizin (MDC) 2012-07-17 [Bead Array] Illumina MouseWG-6 v2.0 expression beadchip (GPL6887) RNA Mus musculus
Mus musculus
lymphnode Germinal center B-cells
7 GSM956166 EVI1 replicate 3 34,760 Hannover Medical School 2012-07-04 [GeneChip] [MoGene-1_0-st] Affymetrix Mouse Gene 1.0 ST Array [transcript (gene) version] (GPL6246) RNA Mus musculus
Mus musculus
peripheral blood Lin- hematopoietic progenitors
8 GSM956165 EVI1 replicate 2 34,760 Hannover Medical School 2012-07-04 [GeneChip] [MoGene-1_0-st] Affymetrix Mouse Gene 1.0 ST Array [transcript (gene) version] (GPL6246) RNA Mus musculus
Mus musculus
peripheral blood Lin- hematopoietic progenitors
9 GSM956164 EVI1 replicate 1 34,760 Hannover Medical School 2012-07-04 [GeneChip] [MoGene-1_0-st] Affymetrix Mouse Gene 1.0 ST Array [transcript (gene) version] (GPL6246) RNA Mus musculus
Mus musculus
peripheral blood Lin- hematopoietic progenitors
10 GSM956163 EGFP replicate 3 34,760 Hannover Medical School 2012-07-04 [GeneChip] [MoGene-1_0-st] Affymetrix Mouse Gene 1.0 ST Array [transcript (gene) version] (GPL6246) RNA Mus musculus
Mus musculus
peripheral blood Lin- hematopoietic progenitors
11 GSM956162 EGFP replicate 2 34,760 Hannover Medical School 2012-07-04 [GeneChip] [MoGene-1_0-st] Affymetrix Mouse Gene 1.0 ST Array [transcript (gene) version] (GPL6246) RNA Mus musculus
Mus musculus
peripheral blood Lin- hematopoietic progenitors
12 GSM956161 EGFP replicate 1 34,760 Hannover Medical School 2012-07-04 [GeneChip] [MoGene-1_0-st] Affymetrix Mouse Gene 1.0 ST Array [transcript (gene) version] (GPL6246) RNA Mus musculus
Mus musculus
peripheral blood Lin- hematopoietic progenitors
13 GSM946947 ASML_CD44 knock-down cells 30,367 University Hostipal Heidelberg 2012-06-12 [Oligo Array] Agilent-028279 SurePrint G3 Rat GE 8x60K Microarray (Probe Name version) (GPL15084) RNA Rattus norvegicus
Rattus norvegicus
lymphnode ASML_CD44 knock-down cells
14 GSM946941 RF 30,367 University Hostipal Heidelberg 2012-06-12 [Oligo Array] Agilent-028279 SurePrint G3 Rat GE 8x60K Microarray (Probe Name version) (GPL15084) RNA Rattus norvegicus
Rattus norvegicus
vein Endothelial cell lines
15 GSM946940 Endothelial cell lines_ASTspan8 exosomes_replicate 1 30,367 University Hostipal Heidelberg 2012-06-12 [Oligo Array] Agilent-028279 SurePrint G3 Rat GE 8x60K Microarray (Probe Name version) (GPL15084) RNA Rattus norvegicus
Rattus norvegicus
vein Endothelial cell lines_ASTspan 8 exosomes_replicate 1
16 GSM946939 Endothelial cell lines_ASTspan8 exosomes 30,367 University Hostipal Heidelberg 2012-06-12 [Oligo Array] Agilent-028279 SurePrint G3 Rat GE 8x60K Microarray (Probe Name version) (GPL15084) RNA Rattus norvegicus
Rattus norvegicus
vein Endothelial cell lines_ASTspan 8 exosomes
17 GSM946938 Endothelial cell lines_AS exosomes 30,367 University Hostipal Heidelberg 2012-06-12 [Oligo Array] Agilent-028279 SurePrint G3 Rat GE 8x60K Microarray (Probe Name version) (GPL15084) RNA Rattus norvegicus
Rattus norvegicus
vein Endothelial cell lines_AS exosomes
18 GSM946937 Endothelial cells, control 30,367 University Hostipal Heidelberg 2012-06-12 [Oligo Array] Agilent-028279 SurePrint G3 Rat GE 8x60K Microarray (Probe Name version) (GPL15084) RNA Rattus norvegicus
Rattus norvegicus
vein Endothelial cell lines
19 GSM946787 Ex vivo sorted T cell from spleen (3 days post adoptive transfer), replicate 2, Rat230_array-B 15,333 Institute for Multiple Sclerosis Research 2012-06-11 [GeneChip] [RAE230B] Affymetrix Rat Expression 230B Array (GPL342) RNA Rattus norvegicus
Rattus norvegicus
spleen Spleen day 3
20 GSM946786 Ex vivo sorted T cell from spleen (3 days post adoptive transfer), replicate 1, Rat230_array-B 15,333 Institute for Multiple Sclerosis Research 2012-06-11 [GeneChip] [RAE230B] Affymetrix Rat Expression 230B Array (GPL342) RNA Rattus norvegicus
Rattus norvegicus
spleen Spleen day 3
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