Gene Expression Omnibus (GEO) Overview Version：2013-06-15Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data Unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(521,594)		   Primates
(5,069)		   Rodents
(189,292)		   Mammals
(16,929)		   Vertebrates
(18,759)		   Invertebrates
(38,793)		   Plants
(93,301)		   Bacteria
(39,613)		   Viruses
(1,263)		   Phages
(101)		   Unclassified
(5,497)		   All
(931,947)		  
  SAGE NlaIII
(718)		   SAGE RsaI
(3)		   SAGE Sau3A
(37)		   MPSS
(100)		   GeneChip
(94,264)		   Tiling Array
(2,050)		   cDNA Array
(11,257)		   Oligo Array
(54,809)		   Bead Array
(14,658)		   Protein Array
(0)		   Antibody
(26)		   RT-PCR
(985)		   HT-Seq
(9,960)		   Other
(425)		   All
(189,292)		  
  brain
(28,502)		   blood
(21,772)		   connective
(11,810)		   reproductive
(6,910)		   muscular
(12,426)		   digestive
(4,791)		   liver
(31,230)		   lung
(8,838)		   urinary
(5,192)		   endo/exo-crine
(5,772)		   embryo
(7,981)		   adult aerial structure
(0)		   young aerial structure
(0)		   root
(0)		   meristem/growing tissue
(0)		   flower/sexual organ
(0)		   seed/fruit/grain
(0)		   pooled
(9,430)		   unclassified
(34,638)		   all
(189,292)		  
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Sample ID Title Number of Data Institute Submission date Platform Sample type Species Organ class Reasoning of the classification
Keywords used for the classification are shown with bold font.
1 GSM837969 Normal Thymocytes, biological replicate 1 1,291,893 UNMC 2011-11-21 [HT Sequencing] Illumina Genome Analyzer II (Mus musculus) (GPL9250) SRA Mus musculus
Mus musculus		 thymus Normal thymocytes from FVB control
2 GSM837970 Normal Thymocytes, biological replicate 2 1,291,893 UNMC 2011-11-21 [HT Sequencing] Illumina Genome Analyzer II (Mus musculus) (GPL9250) SRA Mus musculus
Mus musculus		 thymus Normal thymocytes from FVB control
3 GSM837971 Normal Thymocytes, biological replicate 3 1,291,893 UNMC 2011-11-21 [HT Sequencing] Illumina Genome Analyzer II (Mus musculus) (GPL9250) SRA Mus musculus
Mus musculus		 thymus Normal thymocytes from FVB control
4 GSM837972 Wild-Type Lymphoma, biological replicate 1 1,291,893 UNMC 2011-11-21 [HT Sequencing] Illumina Genome Analyzer II (Mus musculus) (GPL9250) SRA Mus musculus
Mus musculus		 lymphnode Tumor cells harvested from thymic lymphoma of Wild-Type Tumor mice
5 GSM837973 Wild-Type Lymphoma, biological replicate 2 1,291,893 UNMC 2011-11-21 [HT Sequencing] Illumina Genome Analyzer II (Mus musculus) (GPL9250) SRA Mus musculus
Mus musculus		 lymphnode Tumor cells harvested from thymic lymphoma of Wild-Type Tumor mice
6 GSM837974 Wild-Type Lymphoma, biological replicate 3 1,291,893 UNMC 2011-11-21 [HT Sequencing] Illumina Genome Analyzer II (Mus musculus) (GPL9250) SRA Mus musculus
Mus musculus		 lymphnode Tumor cells harvested from thymic lymphoma of Wild-Type Tumor mice
7 GSM837975 Wild-Type Lymphoma, biological replicate 4 1,291,893 UNMC 2011-11-21 [HT Sequencing] Illumina Genome Analyzer II (Mus musculus) (GPL9250) SRA Mus musculus
Mus musculus		 lymphnode Tumor cells harvested from thymic lymphoma of Wild-Type Tumor mice
8 GSM837976 Wild-Type Lymphoma, biological replicate 5 1,291,893 UNMC 2011-11-21 [HT Sequencing] Illumina Genome Analyzer II (Mus musculus) (GPL9250) SRA Mus musculus
Mus musculus		 lymphnode Tumor cells harvested from thymic lymphoma of Wild-Type Tumor mice
9 GSM837977 Dnmt3b-deficient Lymphoma, biological replicate 1 1,291,893 UNMC 2011-11-21 [HT Sequencing] Illumina Genome Analyzer II (Mus musculus) (GPL9250) SRA Mus musculus
Mus musculus		 lymphnode Dnmt3b-deficient tumor cells harvested from thymic lymphoma of Dnmt3b-deficient tumor mice
10 GSM837978 Dnmt3b-deficient Lymphoma, biological replicate 2 1,291,893 UNMC 2011-11-21 [HT Sequencing] Illumina Genome Analyzer II (Mus musculus) (GPL9250) SRA Mus musculus
Mus musculus		 lymphnode Dnmt3b-deficient tumor cells harvested from thymic lymphoma of Dnmt3b-deficient tumor mice
11 GSM837979 Dnmt3b-deficient Lymphoma, biological replicate 3 1,291,893 UNMC 2011-11-21 [HT Sequencing] Illumina Genome Analyzer II (Mus musculus) (GPL9250) SRA Mus musculus
Mus musculus		 lymphnode Dnmt3b-deficient tumor cells harvested from thymic lymphoma of Dnmt3b-deficient tumor mice
12 GSM837980 Dnmt3b-deficient Lymphoma, biological replicate 4 1,291,893 UNMC 2011-11-21 [HT Sequencing] Illumina Genome Analyzer II (Mus musculus) (GPL9250) SRA Mus musculus
Mus musculus		 lymphnode Dnmt3b-deficient tumor cells harvested from thymic lymphoma of Dnmt3b-deficient tumor mice
13 GSM837981 Dnmt3b-deficient Lymphoma, biological replicate 5 1,291,893 UNMC 2011-11-21 [HT Sequencing] Illumina Genome Analyzer II (Mus musculus) (GPL9250) SRA Mus musculus
Mus musculus		 lymphnode Dnmt3b-deficient tumor cells harvested from thymic lymphoma of Dnmt3b-deficient tumor mice
14 GSM837982 24 day pre-tumor Dnmt3b-deficient thymocytes, biological replicate 1 1,291,893 UNMC 2011-11-21 [HT Sequencing] Illumina Genome Analyzer II (Mus musculus) (GPL9250) SRA Mus musculus
Mus musculus		 thymus Dnmt3b-deficient pre-tumor cells harvested from thymus of 24 day old Dnmt3b-deficient mice
15 GSM837983 24 day pre-tumor Dnmt3b-deficient thymocytes, biological replicate 2 1,291,893 UNMC 2011-11-21 [HT Sequencing] Illumina Genome Analyzer II (Mus musculus) (GPL9250) SRA Mus musculus
Mus musculus		 thymus Dnmt3b-deficient pre-tumor cells harvested from thymus of 24 day old Dnmt3b-deficient mice
16 GSM837984 24 day pre-tumor Dnmt3b-deficient thymocytes, biological replicate 3 1,291,893 UNMC 2011-11-21 [HT Sequencing] Illumina Genome Analyzer II (Mus musculus) (GPL9250) SRA Mus musculus
Mus musculus		 thymus Dnmt3b-deficient pre-tumor cells harvested from thymus of 24 day old Dnmt3b-deficient mice
17 GSM539846 mouse germinal center B cells (lymph node) [09-002] 635,722 NIAMS 2010-05-03 [HT Sequencing] Illumina Genome Analyzer II (Mus musculus) (GPL9250) SRA Mus musculus
Mus musculus		 lymphnode Mouse Germinal Center B cells, Lymph Nodes, FACS
18 GSM539880 mouse BclXL germinal center B cells [BalbC] [09-002] 172,200 NIAMS 2010-05-03 [HT Sequencing] Illumina Genome Analyzer II (Mus musculus) (GPL9250) SRA Mus musculus
Mus musculus		 lymphnode Mouse Germinal Center B cells, Lympn Nodes, FACS
19 GSM539850 mouse basophil cells [09-002] 147,932 NIAMS 2010-05-03 [HT Sequencing] Illumina Genome Analyzer II (Mus musculus) (GPL9250) SRA Mus musculus
Mus musculus		 bone marrow Mouse Basophils, Bone Marrow, in vitro differentiated
20 GSM539860 mouse Th1 cells [09-002] 146,897 NIAMS 2010-05-03 [HT Sequencing] Illumina Genome Analyzer II (Mus musculus) (GPL9250) SRA Mus musculus
Mus musculus		 lymphnode Mouse Naive CD4 positive T cells, in vitro Th1 polarized
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