Gene Expression Omnibus (GEO) Overview Version：2013-04-06Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data Unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(502,421)		   Primates
(4,928)		   Rodents
(181,106)		   Mammals
(16,260)		   Vertebrates
(18,263)		   Invertebrates
(37,338)		   Plants
(91,454)		   Bacteria
(39,082)		   Viruses
(1,266)		   Phages
(101)		   Unclassified
(5,242)		   All
(898,944)		  
  SAGE NlaIII
(718)		   SAGE RsaI
(3)		   SAGE Sau3A
(37)		   MPSS
(100)		   GeneChip
(89,973)		   Tiling Array
(2,000)		   cDNA Array
(11,116)		   Oligo Array
(53,181)		   Bead Array
(13,914)		   Protein Array
(0)		   Antibody
(22)		   RT-PCR
(885)		   HT-Seq
(8,762)		   Other
(395)		   All
(181,106)		  
  brain
(27,644)		   blood
(21,024)		   connective
(11,488)		   reproductive
(6,618)		   muscular
(11,970)		   digestive
(4,585)		   liver
(30,267)		   lung
(8,052)		   urinary
(4,873)		   endo/exo-crine
(5,381)		   embryo
(7,581)		   adult aerial structure
(0)		   young aerial structure
(0)		   root
(0)		   meristem/growing tissue
(0)		   flower/sexual organ
(0)		   seed/fruit/grain
(0)		   pooled
(9,138)		   unclassified
(32,485)		   all
(181,106)		  
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Sample ID Title Number of Data Institute Submission date Platform Sample type Species Organ class Reasoning of the classification
Keywords used for the classification are shown with bold font.
1 GSM403582 Radiation-induced mammary carcinoma exposed to 2 Gy of gamma ray at 3 weeks of age rep4 105,072 Hiroshima University 2009-05-15 [Oligo Array] Agilent-015235 Rat Genome CGH Microarray 105A (G4436A) (GPL8480) genomic Rattus norvegicus
Rattus norvegicus		 lymphnode mammary carcinoma No. M1501-Mt2 genomic DNA reference genomic DNA
2 GSM403583 Radiation-induced mammary carcinoma exposed to 2 Gy of gamma ray at 7 weeks of age rep3 105,072 Hiroshima University 2009-05-15 [Oligo Array] Agilent-015235 Rat Genome CGH Microarray 105A (G4436A) (GPL8480) genomic Rattus norvegicus
Rattus norvegicus		 lymphnode mammary carcinoma No. M1113-Mt2 genomic DNA reference genomic DNA
3 GSM403585 Radiation-induced mammary carcinoma exposed to 2 Gy of gamma ray at 7 weeks of age rep5 105,072 Hiroshima University 2009-05-15 [Oligo Array] Agilent-015235 Rat Genome CGH Microarray 105A (G4436A) (GPL8480) genomic Rattus norvegicus
Rattus norvegicus		 lymphnode mammary carcinoma No. M1197-Mt2 genomic DNA reference genomic DNA
4 GSM403586 Radiation-induced mammary carcinoma exposed to 2 Gy of gamma ray at 7 weeks of age rep6 105,072 Hiroshima University 2009-05-15 [Oligo Array] Agilent-015235 Rat Genome CGH Microarray 105A (G4436A) (GPL8480) genomic Rattus norvegicus
Rattus norvegicus		 peripheral blood mammary carcinoma No. M1222-Mt4 genomic DNA reference genomic DNA
5 GSM403587 Radiation-induced mammary carcinoma exposed to 2 Gy of gamma ray at 3 weeks of age rep5 105,072 Hiroshima University 2009-05-15 [Oligo Array] Agilent-015235 Rat Genome CGH Microarray 105A (G4436A) (GPL8480) genomic Rattus norvegicus
Rattus norvegicus		 peripheral blood mammary carcinoma No. M1496-Mt4 genomic DNA reference genomic DNA
6 GSM403588 Radiation-induced mammary carcinoma exposed to 2 Gy of gamma ray at 3 weeks of age rep6 105,072 Hiroshima University 2009-05-15 [Oligo Array] Agilent-015235 Rat Genome CGH Microarray 105A (G4436A) (GPL8480) genomic Rattus norvegicus
Rattus norvegicus		 lymphnode mammary carcinoma No. M1499-Mt2 genomic DNA reference genomic DNA
7 GSM403589 Radiation-induced mammary carcinoma exposed to 2 Gy of gamma ray at 3 weeks of age rep7 105,072 Hiroshima University 2009-05-15 [Oligo Array] Agilent-015235 Rat Genome CGH Microarray 105A (G4436A) (GPL8480) genomic Rattus norvegicus
Rattus norvegicus		 peripheral blood mammary carcinoma No. M1501-Mt4 genomic DNA reference genomic DNA
8 GSM403590 Radiation-induced mammary carcinoma exposed to 2 Gy of gamma ray at 7 weeks of age rep7 105,072 Hiroshima University 2009-05-15 [Oligo Array] Agilent-015235 Rat Genome CGH Microarray 105A (G4436A) (GPL8480) genomic Rattus norvegicus
Rattus norvegicus		 peripheral blood mammary carcinoma No. M1148-Mt4 genomic DNA reference genomic DNA
9 GSM403592 Spontaneous induced mammary carcinoma rep2 105,072 Hiroshima University 2009-05-15 [Oligo Array] Agilent-015235 Rat Genome CGH Microarray 105A (G4436A) (GPL8480) genomic Rattus norvegicus
Rattus norvegicus		 lymphnode mammary carcinoma No. M1299-Mt2 genomic DNA reference genomic DNA
10 GSM498162 spontaneous induced mammary carcinoma M1592-2 105,072 Hiroshima University 2010-01-19 [Oligo Array] Agilent-015235 Rat Genome CGH Microarray 105A (G4436A) (GPL8480) genomic Rattus norvegicus
Rattus norvegicus		 lymphnode mammary carcinoma No. M1592-Mt2 genomic DNA reference genomic DNA
11 GSM498164 spontaneous induced mammary carcinoma M1643-2 105,072 Hiroshima University 2010-01-19 [Oligo Array] Agilent-015235 Rat Genome CGH Microarray 105A (G4436A) (GPL8480) genomic Rattus norvegicus
Rattus norvegicus		 lymphnode mammary carcinoma No. M1643-Mt2 genomic DNA reference genomic DNA
12 GSM1016977 Rat Spleen antisense 1 (exon) 92,353 South Dakota State University 2012-10-09 [GeneChip] [RaEx-1_0-st] Affymetrix Rat Exon 1.0 ST Array [probe set (exon) version] (GPL6194) RNA Rattus norvegicus
Rattus norvegicus		 spleen Rat Spleen antisense 1 (exon)
13 GSM1016978 Rat Spleen antisense 2 (exon) 92,353 South Dakota State University 2012-10-09 [GeneChip] [RaEx-1_0-st] Affymetrix Rat Exon 1.0 ST Array [probe set (exon) version] (GPL6194) RNA Rattus norvegicus
Rattus norvegicus		 spleen Rat Spleen antisense 2 (exon)
14 GSM1016981 Rat Thymus antisense 1 (exon) 92,353 South Dakota State University 2012-10-09 [GeneChip] [RaEx-1_0-st] Affymetrix Rat Exon 1.0 ST Array [probe set (exon) version] (GPL6194) RNA Rattus norvegicus
Rattus norvegicus		 thymus Rat Thymus antisense 1 (exon)
15 GSM1016982 Rat Thymus antisense 2 (exon) 92,353 South Dakota State University 2012-10-09 [GeneChip] [RaEx-1_0-st] Affymetrix Rat Exon 1.0 ST Array [probe set (exon) version] (GPL6194) RNA Rattus norvegicus
Rattus norvegicus		 thymus Rat Thymus antisense 2 (exon)
16 GSM1016997 Rat Spleen sense 1 (exon) 92,353 South Dakota State University 2012-10-09 [GeneChip] [RaEx-1_0-st] Affymetrix Rat Exon 1.0 ST Array [probe set (exon) version] (GPL6194) RNA Rattus norvegicus
Rattus norvegicus		 spleen Rat Spleen sense 1 (exon)
17 GSM1016998 Rat Spleen sense 2 (exon) 92,353 South Dakota State University 2012-10-09 [GeneChip] [RaEx-1_0-st] Affymetrix Rat Exon 1.0 ST Array [probe set (exon) version] (GPL6194) RNA Rattus norvegicus
Rattus norvegicus		 spleen Rat Spleen sense 2 (exon)
18 GSM1017001 Rat Thymus sense 1 (exon) 92,353 South Dakota State University 2012-10-09 [GeneChip] [RaEx-1_0-st] Affymetrix Rat Exon 1.0 ST Array [probe set (exon) version] (GPL6194) RNA Rattus norvegicus
Rattus norvegicus		 thymus Rat Thymus sense 1 (exon)
19 GSM1017002 Rat Thymus sense 2 (exon) 92,353 South Dakota State University 2012-10-09 [GeneChip] [RaEx-1_0-st] Affymetrix Rat Exon 1.0 ST Array [probe set (exon) version] (GPL6194) RNA Rattus norvegicus
Rattus norvegicus		 thymus Rat Thymus sense 2 (exon)
20 GSM353763 PBMC_Fed_Con_1 45,220 Wageningen University 2008-12-22 [Oligo Array] Agilent-014879 Whole Rat Genome Microarray 4x44K G4131F (Feature Number version) (GPL4135) RNA Rattus norvegicus
Rattus norvegicus		 lymphnode PBMC, Fed, Control, 1 Reference RNA. Pool of equal molar total RNA samples of all groups analyzed.
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