Gene Expression Omnibus (GEO) Overview

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DataSet	:	Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample	:	Biological materials.
platform	:	Methods or instruments used for the gene expression profilings.

Human
(28,032)

Rodents
(8,356)

Phages
(0)

SAGE RsaI
(0)

SAGE Sau3A
(0)

MPSS
(0)

Tiling Array
(0)

Protein Array
(0)

Antibody
(0)

RT-PCR
(50)

HT-Seq
(259)

Other
(0)

All
(8,356)

brain
(1,351)

adult aerial structure
(0)

young aerial structure
(0)

root
(0)

meristem/growing tissue
(0)

flower/sexual organ
(0)

seed/fruit/grain
(0)

pooled
(555)

unclassified
(1,454)

all
(8,356)

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	Sample ID	Title	Number of Data	Institute	Submission date	Platform	Sample type	Species	Organ class	Reasoning of the classification Keywords used for the classification are shown with bold font.
1	GSM1004652	NPC merged mononucleosomes	0	German Cancer Research Center	2012-09-14	[HT Sequencing] Illumina HiSeq 2000 (Mus musculus) (GPL13112)	SRA	Mus musculus	cerebrum	Neuronal progenitor cells
2	GSM1005488	NPCtotalRNA1	0	German Cancer Research Center	2012-09-18	[HT Sequencing] Illumina Genome Analyzer IIx (Mus musculus) (GPL11002)	SRA	Mus musculus	cerebrum	Neuronal progenitor cells
3	GSM1005489	NPCtotalRNA2	0	German Cancer Research Center	2012-09-18	[HT Sequencing] Illumina HiSeq 2000 (Mus musculus) (GPL13112)	SRA	Mus musculus	cerebrum	Neuronal progenitor cells
4	GSM1039182	8A_embryo-dko	0	German Center for Cancer Research	2012-11-19	[HT Sequencing] Illumina HiSeq 2000 (Mus musculus) (GPL13112)	SRA	Mus musculus	cerebrum	brain
5	GSM1039183	9A_embryo-dko	0	German Center for Cancer Research	2012-11-19	[HT Sequencing] Illumina HiSeq 2000 (Mus musculus) (GPL13112)	SRA	Mus musculus	cerebrum	brain
6	GSM1039184	10A_embryo-wt	0	German Center for Cancer Research	2012-11-19	[HT Sequencing] Illumina HiSeq 2000 (Mus musculus) (GPL13112)	SRA	Mus musculus	cerebrum	brain
7	GSM1039185	11A_adult-dko	0	German Center for Cancer Research	2012-11-19	[HT Sequencing] Illumina HiSeq 2000 (Mus musculus) (GPL13112)	SRA	Mus musculus	cerebrum	cerebrum
8	GSM1039186	12A_adult-wt	0	German Center for Cancer Research	2012-11-19	[HT Sequencing] Illumina HiSeq 2000 (Mus musculus) (GPL13112)	SRA	Mus musculus	cerebrum	cerebrum
9	GSM1039949	11B_adult-dko	0	German Center for Cancer Research	2012-11-20	[HT Sequencing] Illumina HiSeq 2000 (Mus musculus) (GPL13112)	SRA	Mus musculus	cerebrum	cerebrum
10	GSM1039950	12B_adult-wt	0	German Center for Cancer Research	2012-11-20	[HT Sequencing] Illumina HiSeq 2000 (Mus musculus) (GPL13112)	SRA	Mus musculus	cerebrum	cerebrum
11	GSM499736	Crx-ChIP-Seq, wt, 1	0	Institute of Human Genetics	2010-01-22	[HT Sequencing] Illumina Genome Analyzer (Mus musculus) (GPL9185)	SRA	Mus musculus	retina	Retina, wt, Crx ChIP
12	GSM499737	Crx-ChIP-Seq, wt, 2	0	Institute of Human Genetics	2010-01-22	[HT Sequencing] Illumina Genome Analyzer (Mus musculus) (GPL9185)	SRA	Mus musculus	retina	Retina, wt, Crx ChIP
13	GSM499738	IgG-ChIP-Seq, wt, 1	0	Institute of Human Genetics	2010-01-22	[HT Sequencing] Illumina Genome Analyzer (Mus musculus) (GPL9185)	SRA	Mus musculus	retina	Retina, wt, IgG ChIP
14	GSM499739	Crx-ChIP-Seq, Nrl ko, 1	0	Institute of Human Genetics	2010-01-22	[HT Sequencing] Illumina Genome Analyzer (Mus musculus) (GPL9185)	SRA	Mus musculus	retina	Retina, Nrl ko, Crx ChIP
15	GSM499740	IgG-ChIP-Seq, Nrl ko, 1	0	Institute of Human Genetics	2010-01-22	[HT Sequencing] Illumina Genome Analyzer (Mus musculus) (GPL9185)	SRA	Mus musculus	retina	Retina, Nrl ko, IgG ChIP
16	GSM499741	Crx-ChIP-Seq, Nrl ko, 2	0	Institute of Human Genetics	2010-01-22	[HT Sequencing] Illumina Genome Analyzer (Mus musculus) (GPL9185)	SRA	Mus musculus	retina	Retina, Nrl ko, Crx ChIP
17	GSM499742	IgG-ChIP-Seq, Nrl ko, 2	0	Institute of Human Genetics	2010-01-22	[HT Sequencing] Illumina Genome Analyzer (Mus musculus) (GPL9185)	SRA	Mus musculus	retina	Retina, Nrl ko, IgG ChIP
18	GSM539553	2 weeks CONTROL1_lane1	0	Technische Hochschule Wildau	2010-04-30	[HT Sequencing] Illumina Genome Analyzer II (Rattus norvegicus) (GPL10287)	SRA	Rattus norvegicus	peripheral nerve	L4 DRG
19	GSM539554	2 weeks CONTROL1_lane2	0	Technische Hochschule Wildau	2010-04-30	[HT Sequencing] Illumina Genome Analyzer II (Rattus norvegicus) (GPL10287)	SRA	Rattus norvegicus	peripheral nerve	L4 DRG
20	GSM539555	2 weeks CONTROL1_lane3	0	Technische Hochschule Wildau	2010-04-30	[HT Sequencing] Illumina Genome Analyzer II (Rattus norvegicus) (GPL10287)	SRA	Rattus norvegicus	peripheral nerve	L4 DRG

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