Gene Expression Omnibus (GEO) Overview Version:2014-04-12Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data Unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(17,432)
  Primates
(665)
  Rodents
(7,826)
  Mammals
(399)
  Vertebrates
(731)
  Invertebrates
(1,567)
  Plants
(3,435)
  Bacteria
(998)
  Viruses
(14)
  Phages
(0)
  Unclassified
(76)
  All
(33,163)
 
  SAGE NlaIII
(1)
  SAGE RsaI
(0)
  SAGE Sau3A
(0)
  MPSS
(0)
  GeneChip
(2,864)
  Tiling Array
(48)
  cDNA Array
(80)
  Oligo Array
(4,122)
  Bead Array
(598)
  Protein Array
(0)
  Antibody
(0)
  RT-PCR
(19)
  HT-Seq
(85)
  Other
(9)
  All
(7,826)
 
  brain
(1,154)
  blood
(679)
  connective
(375)
  reproductive
(118)
  muscular
(684)
  digestive
(192)
  liver
(2,935)
  lung
(233)
  urinary
(160)
  endo/exo-crine
(283)
  embryo
(159)
  adult aerial structure
(0)
  young aerial structure
(0)
  root
(0)
  meristem/growing tissue
(0)
  flower/sexual organ
(0)
  seed/fruit/grain
(0)
  pooled
(181)
  unclassified
(673)
  all
(7,826)
 
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Sample ID Title Number of Data Institute Submission date Platform Sample type Species Organ class Reasoning of the classification
Keywords used for the classification are shown with bold font.
1 GSM418272 WT|NEX2 34,967 Flanders Institute for Biotechnology (VIB) 2009-06-18 [Oligo Array] GE Healthcare/Amersham Biosciences CodeLinkâ„¢ Mouse Whole Genome Bioarray (GPL2897) RNA Mus musculus
Mus musculus
cerebrum neocortex and hippocampal tissue E14.5
2 GSM418271 WT|NEX1 34,967 Flanders Institute for Biotechnology (VIB) 2009-06-18 [Oligo Array] GE Healthcare/Amersham Biosciences CodeLinkâ„¢ Mouse Whole Genome Bioarray (GPL2897) RNA Mus musculus
Mus musculus
cerebrum neocortex and hippocampal tissue E14.5
3 GSM418268 WT|Nestin2.2 34,967 Flanders Institute for Biotechnology (VIB) 2009-06-18 [Oligo Array] GE Healthcare/Amersham Biosciences CodeLinkâ„¢ Mouse Whole Genome Bioarray (GPL2897) RNA Mus musculus
Mus musculus
cerebrum neocortex and hippocampal tissue E18.5
4 GSM418267 WT|Nestin2.1 34,967 Flanders Institute for Biotechnology (VIB) 2009-06-18 [Oligo Array] GE Healthcare/Amersham Biosciences CodeLinkâ„¢ Mouse Whole Genome Bioarray (GPL2897) RNA Mus musculus
Mus musculus
cerebrum neocortex and hippocampal tissue E18.5
5 GSM418264 WT|Nestin1.2 34,967 Flanders Institute for Biotechnology (VIB) 2009-06-18 [Oligo Array] GE Healthcare/Amersham Biosciences CodeLinkâ„¢ Mouse Whole Genome Bioarray (GPL2897) RNA Mus musculus
Mus musculus
cerebrum neocortex and hippocampal tissue E18.5
6 GSM418263 WT|Nestin1.1 34,967 Flanders Institute for Biotechnology (VIB) 2009-06-18 [Oligo Array] GE Healthcare/Amersham Biosciences CodeLinkâ„¢ Mouse Whole Genome Bioarray (GPL2897) RNA Mus musculus
Mus musculus
cerebrum neocortex and hippocampal tissue E18.5
7 GSM388660 WT_P0_whole_Cochlea_3_V4 206 Tel Aviv University 2009-04-01 [Oligo Array] TAU/KBA_mouse_206_v4.0 (GPL8375) other Mus musculus
Mus musculus
peripheral nerve Newborn mouse P0 whole cochleae
8 GSM388633 WT_P0_whole_Cochlea_2 206 Tel Aviv University 2009-04-01 [Oligo Array] TAU/KBA_mouse_206_v2.0 (GPL8369) other Mus musculus
Mus musculus
peripheral nerve Newborn mouse P0 whole cochleae
9 GSM407371 WT repl4 46,632 IMPPC 2009-05-26 [Bead Array] Illumina mouse-6 v1.1 expression beadchip (GPL6105) RNA Mus musculus
Mus musculus
cerebrum Wild type hippocampus
10 GSM407370 WT repl3 46,632 IMPPC 2009-05-26 [Bead Array] Illumina mouse-6 v1.1 expression beadchip (GPL6105) RNA Mus musculus
Mus musculus
cerebrum Wild type hippocampus
11 GSM407369 WT repl2 46,632 IMPPC 2009-05-26 [Bead Array] Illumina mouse-6 v1.1 expression beadchip (GPL6105) RNA Mus musculus
Mus musculus
cerebrum Wild type hippocampus
12 GSM407368 WT repl1 46,632 IMPPC 2009-05-26 [Bead Array] Illumina mouse-6 v1.1 expression beadchip (GPL6105) RNA Mus musculus
Mus musculus
cerebrum Wild type hippocampus
13 GSM407034 wt lenses at E13.5, biological rep5 35,557 NIH\NEI 2009-05-22 [GeneChip] [MoGene-1_0-st] Affymetrix Mouse Gene 1.0 ST Array [transcript (gene) version] (GPL6246) RNA Mus musculus
Mus musculus
eye lenses from the wild type embryo at E13.5
14 GSM407033 wt lenses at E13.5, biological rep4 35,557 NIH\NEI 2009-05-22 [GeneChip] [MoGene-1_0-st] Affymetrix Mouse Gene 1.0 ST Array [transcript (gene) version] (GPL6246) RNA Mus musculus
Mus musculus
eye lenses from the wild type embryo at E13.5
15 GSM407032 wt lenses at E13.5, biological rep3 35,557 NIH\NEI 2009-05-22 [GeneChip] [MoGene-1_0-st] Affymetrix Mouse Gene 1.0 ST Array [transcript (gene) version] (GPL6246) RNA Mus musculus
Mus musculus
eye lenses from the wild type embryo at E13.5
16 GSM407031 wt lenses at E13.5, biological rep2 35,557 NIH\NEI 2009-05-22 [GeneChip] [MoGene-1_0-st] Affymetrix Mouse Gene 1.0 ST Array [transcript (gene) version] (GPL6246) RNA Mus musculus
Mus musculus
eye lenses from the wild type embryo at E13.5
17 GSM407030 wt lenses at E13.5, biological rep1 35,557 NIH\NEI 2009-05-22 [GeneChip] [MoGene-1_0-st] Affymetrix Mouse Gene 1.0 ST Array [transcript (gene) version] (GPL6246) RNA Mus musculus
Mus musculus
eye lenses from the wild type embryo at E13.5
18 GSM399068 WT brain (cerebrum) microvascular fragments, 2 months old, biological rep 3 45,101 Karolinska Institutet 2009-04-29 [GeneChip] [Mouse430_2] Affymetrix Mouse Genome 430 2.0 Array (GPL1261) RNA Mus musculus
Mus musculus
cerebrum Mouse brain
19 GSM399066 WT Brain (cerebrum) microvascular fragments, 2 months old, biological rep 2 45,101 Karolinska Institutet 2009-04-29 [GeneChip] [Mouse430_2] Affymetrix Mouse Genome 430 2.0 Array (GPL1261) RNA Mus musculus
Mus musculus
cerebrum Mouse brain
20 GSM399064 WT brain (cerebrum) microvascular fragments, 2 months old, biological rep 1 45,101 Karolinska Institutet 2009-04-29 [GeneChip] [Mouse430_2] Affymetrix Mouse Genome 430 2.0 Array (GPL1261) RNA Mus musculus
Mus musculus
cerebrum Mouse brain
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